Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0539500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21243207:21245827:-1 gene:Os09g0539500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 20, Oryza sativa SKP1-like gene 20 description:Similar to SKP1-like protein 1A. (Os09t0539500-01)
Sequence	ATGGCGGCCGAGGCGGAGACGAAGGCGATGATCACCCTCCGCAGCTGCGAGGGCCAGGTG TTCGAGGTCGCGGAGGCCGTGGCCATGGAGTCCCAGACCATCCGCCACATGATCGAGGAC AAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATCCTCTCCAAGGTA ATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCCGCCGCCGACGGC GACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGACGAGCTCAAGACG TTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTCATCCTGGCTGCA AACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGACATGATC AAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAATGACTTCACCCCC GAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGA

Peptide Sequence

PEP ID	Os09t0539500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21243207:21245827:-1 gene:Os09g0539500 transcript:Os09t0539500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 20, Oryza sativa SKP1-like gene 20 description:Similar to SKP1-like protein 1A. (Os09t0539500-01)
Sequence	MAAEAETKAMITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKV IEYCSKHVEARGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLILAA NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE

Transcript Sequence

Transcript ID	Os09t0539500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21243207:21245827:-1 gene:Os09g0539500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN 20, Oryza sativa SKP1-like gene 20 description:Similar to SKP1-like protein 1A. (Os09t0539500-01)
Sequence	CCCGAGGAAGAAACCCACCCCCAATCCCAATCTATTCCATCGCTTTCTAGGGTTTGTTCT CTCGTCGATCCGATGGCGGCCGAGGCGGAGACGAAGGCGATGATCACCCTCCGCAGCTGC GAGGGCCAGGTGTTCGAGGTCGCGGAGGCCGTGGCCATGGAGTCCCAGACCATCCGCCAC ATGATCGAGGACAAGTGCGCCGACACCGGCATCCCGCTCCCCAACGTCTCCGCCAAGATC CTCTCCAAGGTAATCGAGTACTGCAGCAAGCACGTCGAGGCGCGCGGCGGGGCGGCCGCC GCCGCCGACGGCGACGCCCCCGCCCCCGCCGCCGTGGAGGCCAACAAGGCCGTCGAGGAC GAGCTCAAGACGTTCGACGCCGAGTTCGTCAAGGTCGACCAGTCCACCCTCTTCGATCTC ATCCTGGCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTG GCTGACATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAGAAT GACTTCACCCCCGAGGAAGAAGAGGAGGTGAGGAGGGAGAACCAGTGGGCCTTCGAATGA AGACCCCCCCCCCCCCCCCCCCAAAAAAAAAGCAACAACCATCTCATGCGAATGACCAGC AAGGAAGGGGAAGCGCGTCATGTCGAGAAGTTGATCCTGGAGCAGCTATGAACTCTCTGC TTGAACTGTCTTTAAGAAAGTTGTAATTAGGGTTAGTTCGTCGTTAGTTGGTTGGGAGAG CAGACTATTTAGCTGACTCCGTTCTGTTTTGTGCACTCTGGAGCGAGAAGGAAATGATTG CTGGTTGTTCTGCT