Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0538800-03
CDS Infomation	cds chromosome:IRGSP-1.0:9:21214248:21217617:-1 gene:Os09g0538800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Synaptotagmin C. (Os09t0538800-01);Similar to Synaptotagmin C. (Os09t0538800-02);Similar to calcium lipid binding protein-like. (Os09t0538800-03)
Sequence	ATGGGTGTGATTAGTACGGTGCTTGGTTTCTCTGGGTTTGGCTTTGGATTCTCCGCTGGT ATTGTCATCGGATACTACTTCTTCATCTACTTCCAGCCAACTGATGTCAAGGACGTCAAA GTTCGCCCACTTGTCGAATATGACTCAATATCGTTGGACGGTATCCTTCCTGAAATTCCT TTGTGGGTCAAGAATCCTGACTATGATAGAATTGATTGGCTGAATAGATTTTTGGAGATG ATGTGGCCTTACCTCAACAAGGCGATCTGCAGAACTGCACTGGATATTGCAAAGCCAATC ATTGAAGAGAACAGGAAGACGTATAAACTAGAATCTATTGAGTTTGAATCACTTACATTG GGTAGCTTACCACCCACCTTTCAAGGAATGAAAGTGTATGTCACAGAAGAACAAGAATTG ATAATGGAACCATCTCTTAAGTGGGCTGCAAATCCCAATGTCACTGTTGTTGTAAAGGCT TATGGGTTGAAAGCAACTGTCCAGATTGTGGATCTGCAAGTCTTTGCTTCACCTCGTATT ACTCTGAAGCCATTGGTCCCTACATTTCCTTGCTTCGCAAAAATCCTTGTTTCTCTCATG GAGAAGCCACACGTTGACTTCGGGCTGAAACTTTTCGGAGCAGATTTAATGGCTATCCCT GGTCTTTACAGATTTGTTCAGGAGACCATAAAAAAGCAAGTTGCGAGCATGTATTTGTGG CCAAAGACATTGGAAGTTCCCATAATGGATCCCTCAAAAGCTTCTAAGAAGCCTGTTGGA ATTCTACTTGTGAAAGTTTTAAGAGCTCAAAACCTGCGAAAGAAGGATCTGTTGGGTAAA TCGGACCCATATGTGAAACTTAAGATGTCAGATGACAAGCTTCCGTCCAAGAAAACAACA GTGAAGCGTAGCAATCTCAATCCAGAGTGGAATGAGGATTTCAAATTTGTTGTGACAGAC CCTGAAACTCAGGCACTGGAAATTAATGTCTTTGATTGGGAACAGGTTGGCAAGCATGAG AAAATGGGCATGAACAACATTCTGTTGAAAGAACTTCCCGCAGATGAGACTAAAGTCATG ACTGTTAACTTGCTTAAGACGATGGATCCTAATGATGTACAAAATGAGAAGTCCCGTGGT CAGCTTACTCTGGAGGTGACATATAAGCCTTTCAAGGAAGAGGATATGGAGAAAGAAGGC ATCGATAATGCTGATGTGGTGG

Peptide Sequence

PEP ID	Os09t0538800-03
PEP Infomation	pep chromosome:IRGSP-1.0:9:21214248:21217617:-1 gene:Os09g0538800 transcript:Os09t0538800-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Synaptotagmin C. (Os09t0538800-01);Similar to Synaptotagmin C. (Os09t0538800-02);Similar to calcium lipid binding protein-like. (Os09t0538800-03)
Sequence	MGVISTVLGFSGFGFGFSAGIVIGYYFFIYFQPTDVKDVKVRPLVEYDSISLDGILPEIP LWVKNPDYDRIDWLNRFLEMMWPYLNKAICRTALDIAKPIIEENRKTYKLESIEFESLTL GSLPPTFQGMKVYVTEEQELIMEPSLKWAANPNVTVVVKAYGLKATVQIVDLQVFASPRI TLKPLVPTFPCFAKILVSLMEKPHVDFGLKLFGADLMAIPGLYRFVQETIKKQVASMYLW PKTLEVPIMDPSKASKKPVGILLVKVLRAQNLRKKDLLGKSDPYVKLKMSDDKLPSKKTT VKRSNLNPEWNEDFKFVVTDPETQALEINVFDWEQVGKHEKMGMNNILLKELPADETKVM TVNLLKTMDPNDVQNEKSRGQLTLEVTYKPFKEEDMEKEGIDNADVV

Transcript Sequence

Transcript ID	Os09t0538800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21214248:21217617:-1 gene:Os09g0538800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Synaptotagmin C. (Os09t0538800-01);Similar to Synaptotagmin C. (Os09t0538800-02);Similar to calcium lipid binding protein-like. (Os09t0538800-03)
Sequence	TTGCTCTGAATTTTGCTTATGCCGGGATATTTTGATGCTCTCACGCAAAAAGCTGAATAG AGTATTTTCACCAAAAAAAAAAAAGAGGAGCCTTAGGCTGAAATCTGCTATAACTTTGGA GGTACTAAAACGAGTCTGAGATGGGTGTGATTAGTACGGTGCTTGGTTTCTCTGGGTTTG GCTTTGGATTCTCCGCTGGTATTGTCATCGGATACTACTTCTTCATCTACTTCCAGCCAA CTGATGTCAAGGACGTCAAAGTTCGCCCACTTGTCGAATATGACTCAATATCGTTGGACG GTATCCTTCCTGAAATTCCTTTGTGGGTCAAGAATCCTGACTATGATAGAATTGATTGGC TGAATAGATTTTTGGAGATGATGTGGCCTTACCTCAACAAGGCGATCTGCAGAACTGCAC TGGATATTGCAAAGCCAATCATTGAAGAGAACAGGAAGACGTATAAACTAGAATCTATTG AGTTTGAATCACTTACATTGGGTAGCTTACCACCCACCTTTCAAGGAATGAAAGTGTATG TCACAGAAGAACAAGAATTGATAATGGAACCATCTCTTAAGTGGGCTGCAAATCCCAATG TCACTGTTGTTGTAAAGGCTTATGGGTTGAAAGCAACTGTCCAGATTGTGGATCTGCAAG TCTTTGCTTCACCTCGTATTACTCTGAAGCCATTGGTCCCTACATTTCCTTGCTTCGCAA AAATCCTTGTTTCTCTCATGGAGAAGCCACACGTTGACTTCGGGCTGAAACTTTTCGGAG CAGATTTAATGGCTATCCCTGGTCTTTACAGATTTGTTCAGGAGACCATAAAAAAGCAAG TTGCGAGCATGTATTTGTGGCCAAAGACATTGGAAGTTCCCATAATGGATCCCTCAAAAG CTTCTAAGAAGCCTGTTGGAATTCTACTTGTGAAAGTTTTAAGAGCTCAAAACCTGCGAA AGAAGGATCTGTTGGGTAAATCGGACCCATATGTGAAACTTAAGATGTCAGATGACAAGC TTCCGTCCAAGAAAACAACAGTGAAGCGTAGCAATCTCAATCCAGAGTGGAATGAGGATT TCAAATTTGTTGTGACAGACCCTGAAACTCAGGCACTGGAAATTAATGTCTTTGATTGGG AACAGGTTGGCAAGCATGAGAAAATGGGCATGAACAACATTCTGTTGAAAGAACTTCCCG CAGATGAGACTAAAGTCATGACTGTTAACTTGCTTAAGACGATGGATCCTAATGATGTAC AAAATGAGAAGTCCCGTGGTCAGCTTACTCTGGAGGTGACATATAAGCCTTTCAAGGAAG AGGATATGGAGAAAGAAGGCATCGATAATGCTGATGTGGTGG