Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0538200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21171690:21173884:1 gene:Os09g0538200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha4 subunit description:Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4). (Os09t0538200-01)
Sequence	ATGGCCCGCTACGACCGCGCCATCACCGTCTTCTCCCCCGACGGCCACCTCTTCCAGGTC GAGTACGCCCTCGAGGCCGTCCGCAAGGGCAACGCCGCCGTCGGCGTCCGCGGCTCCGAC ACCGTCGTCCTCGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCAGGTCGGTG CGCAAGATCGCTAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCAAGGCGGAC GCCCGCGTGCTCATCAACCGCGCGCGGGTCGAGTGCCAGAGCCACCGCCTCACCGTCGAG GACGCCGTCACCGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGAAGTACACC CAGAGCGGCGGGGTCCGCCCCTTCGGACTCTCCACCCTCATCGTCGGATTCGACCCTTAC ACCGACAAGCCCGCGCTGTACCAGACCGATCCCTCCGGCACCTTCTCCGCGTGGAAGGCC AACGCCACGGGGAGGAACTCCAACTCCATGAGGGAGTTCTTGGAGAAGAATTACAAGGAG ACCTCTGGCAAAGAGACCATCAAGCTCGCAATCCGTGCTCTCCTTGAGGTTGTTGAGAGT GGCGGAAAGAACATCGAGATTGCAGTGATGACACAGAAGGATGGTCTTCGCCAACTCGAG GAGGCTGAAATCGACGAATATGTTGCTGAGATCGAGGCAGAGAAAGCTGCAGCTGAGGCT GCAAAGAAGGGTGCCCCTAAGGAGACCTAA

Peptide Sequence

PEP ID	Os09t0538200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21171690:21173884:1 gene:Os09g0538200 transcript:Os09t0538200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha4 subunit description:Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4). (Os09t0538200-01)
Sequence	MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKLQDSRSV RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE TSGKETIKLAIRALLEVVESGGKNIEIAVMTQKDGLRQLEEAEIDEYVAEIEAEKAAAEA AKKGAPKET

Transcript Sequence

Transcript ID	Os09t0538200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21171690:21173884:1 gene:Os09g0538200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:20S proteasome alpha4 subunit description:Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S proteasome alpha subunit D) (20S proteasome subunit alpha-4). (Os09t0538200-01)
Sequence	TCGCTCCCCACCAAGCTCCGCCACCGCCGGAACCCTAGACCCGCCGGCGATGGCCCGCTA CGACCGCGCCATCACCGTCTTCTCCCCCGACGGCCACCTCTTCCAGGTCGAGTACGCCCT CGAGGCCGTCCGCAAGGGCAACGCCGCCGTCGGCGTCCGCGGCTCCGACACCGTCGTCCT CGGCGTCGAGAAGAAGTCCACCCCCAAGCTCCAGGACTCCAGGTCGGTGCGCAAGATCGC TAGCCTGGACACCCACATCGCGCTGGCGTGCGCGGGGCTCAAGGCGGACGCCCGCGTGCT CATCAACCGCGCGCGGGTCGAGTGCCAGAGCCACCGCCTCACCGTCGAGGACGCCGTCAC CGTCGAGTACATCACGCGCTACATCGCCGGCCTGCAGCAGAAGTACACCCAGAGCGGCGG GGTCCGCCCCTTCGGACTCTCCACCCTCATCGTCGGATTCGACCCTTACACCGACAAGCC CGCGCTGTACCAGACCGATCCCTCCGGCACCTTCTCCGCGTGGAAGGCCAACGCCACGGG GAGGAACTCCAACTCCATGAGGGAGTTCTTGGAGAAGAATTACAAGGAGACCTCTGGCAA AGAGACCATCAAGCTCGCAATCCGTGCTCTCCTTGAGGTTGTTGAGAGTGGCGGAAAGAA CATCGAGATTGCAGTGATGACACAGAAGGATGGTCTTCGCCAACTCGAGGAGGCTGAAAT CGACGAATATGTTGCTGAGATCGAGGCAGAGAAAGCTGCAGCTGAGGCTGCAAAGAAGGG TGCCCCTAAGGAGACCTAATTCTTCGCTGTACCAAATTTTCATTCCATCAACACATTTAG CGCATTACTTGTGTTCCACAGCACTGTTTTTAACTGTTCTAGAGGAACGCTAGATTGTTT GGAGAGTGAATGATTCTATTCTTATTGCACATCAAGATCCCTTAGACCC