Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0535500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21056545:21057436:-1 gene:Os09g0535500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os09t0535500-01)
Sequence	ATGCAGCCATGCGGGCGCCGTCTCCTCGGCGCCGGCACCGCCTCGCCGCCGCCGCTGCCG GGCTTGGGTTCGGCTTCGGCCCACTCGATGGACCGCGCGCAGCGGGCGCACATGGTGCGG GCGCTGGGGGTGACCACCACGGTGCTCTTCGTCGCCAGCGTCTCCTACATCGCGCTCACC GCGCTCTACGCCTGCTTCTGCGACGGCGGCGGGCGGCGACGGCGAGAAGACGGCGGGTCG TCGTCGGTGCGCCCCGAGCCGTCCGAGGAGACCAAGCGCGCGCTCGACGGGATCCCGGTG CACGTGGTCCAGATGCCGCCCCGCGACGGCGGCGGCGGCGGCGCCGACGAGGAGGGCGGC AGCGGCGACTGCGCGGTGTGCCTGGCGGAGTACGCCGCCGGGGACGAGGTGCGCGTGCTG CCGGCGTGCGGGCATGGGTTCCACAGGGAGTGCGTCGACCGGTGGCTGCTCACGCGCGCG CCCACCTGCCCCGTCTGCCGCGCACCCGTCGTCGCGCGCGTCGAGGGCCCGGACGACGAC GCCAAGGAGGATTACTGCGGCGACGGCGAGAGCGTCGAGAGGCACGGCGGCGGCGGCGGC GACATTGGCTTCCTGTCCGTCGCCGGCGAGTCCCGCGTGCTTCCTGCGATTTGA

Peptide Sequence

PEP ID	Os09t0535500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21056545:21057436:-1 gene:Os09g0535500 transcript:Os09t0535500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os09t0535500-01)
Sequence	MQPCGRRLLGAGTASPPPLPGLGSASAHSMDRAQRAHMVRALGVTTTVLFVASVSYIALT ALYACFCDGGGRRRREDGGSSSVRPEPSEETKRALDGIPVHVVQMPPRDGGGGGADEEGG SGDCAVCLAEYAAGDEVRVLPACGHGFHRECVDRWLLTRAPTCPVCRAPVVARVEGPDDD AKEDYCGDGESVERHGGGGGDIGFLSVAGESRVLPAI

Transcript Sequence

Transcript ID	Os09t0535500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21056545:21057436:-1 gene:Os09g0535500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8). (Os09t0535500-01)
Sequence	GTGCACCACCACGAGAGCGGTGGCTATGCAGCCATGCGGGCGCCGTCTCCTCGGCGCCGG CACCGCCTCGCCGCCGCCGCTGCCGGGCTTGGGTTCGGCTTCGGCCCACTCGATGGACCG CGCGCAGCGGGCGCACATGGTGCGGGCGCTGGGGGTGACCACCACGGTGCTCTTCGTCGC CAGCGTCTCCTACATCGCGCTCACCGCGCTCTACGCCTGCTTCTGCGACGGCGGCGGGCG GCGACGGCGAGAAGACGGCGGGTCGTCGTCGGTGCGCCCCGAGCCGTCCGAGGAGACCAA GCGCGCGCTCGACGGGATCCCGGTGCACGTGGTCCAGATGCCGCCCCGCGACGGCGGCGG CGGCGGCGCCGACGAGGAGGGCGGCAGCGGCGACTGCGCGGTGTGCCTGGCGGAGTACGC CGCCGGGGACGAGGTGCGCGTGCTGCCGGCGTGCGGGCATGGGTTCCACAGGGAGTGCGT CGACCGGTGGCTGCTCACGCGCGCGCCCACCTGCCCCGTCTGCCGCGCACCCGTCGTCGC GCGCGTCGAGGGCCCGGACGACGACGCCAAGGAGGATTACTGCGGCGACGGCGAGAGCGT CGAGAGGCACGGCGGCGGCGGCGGCGACATTGGCTTCCTGTCCGTCGCCGGCGAGTCCCG CGTGCTTCCTGCGATTTGATTTTGCTACGAGTACTCATCAGCTGTAATAGGGTACTTAGT AGGTGTTTAGCTCAATTTTGCTAGCTGTGGACAAACGTAGCTTAGTAGGATGATTCGAGT TTGTTTATTGGCGAGAGCAATAACGATCATACGAGTAGTTTCACTTTCAGGGTTACAAGT TCATGTGCGATCAATCTGGTTATTTAGTTATTATACCTTCTTAAAATTTCTG