Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0535000-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:21033111:21036395:-1 gene:Os09g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Triosephosphate isomerase. (Os09t0535000-01);Similar to Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase). (Os09t0535000-02);Similar to Triosephosphate isomerase. (Os09t0535000-03)
Sequence	ATGGCGGCGCCGTCGTCCCTCGCGTCCTCCCACCTCTCCCGCCTCGCCGACCTCCGCCGC GCAGGCGTCGCCGCCGCCGCCCCGGCGCATCCGCAGCAGCTCCGCCTCGGGTGCTCCCGC CGCCGCGCCCAGCGCGTCGTCGCCATGGCCGGATCCGGCAAGTTCTTCGTTGGAGGCAAC TGGAAGTGCAATGGAACGAAGGACTCTGTCAGCAAGCTTGTGACTGAATTGAATGCTGCT ACACTTGAACCTGATGTTGATGTTGTGGTTGCACCACCATTCATTTATATTGATCAGGTT AAGAACTCACTAACTGATCGTATTGAGGTATCTGCTCAGAATGTTTGGATTGGAAAAGGA GGAGCATACACTGGAGAGATCAGTGCGGAGCAATTGGTGGACATTGGCTGCCAATGGGTT ATTCTTGGGCATTCAGAGCGTAGACATGTCATTGGTGAAGATGATCAGTTTATTGGGAAG AAGGCTGCATATGCCTTGAGTCAAAATGTAAAGGTTATTGCCTGCATAGGGGAGCTGTTG GAAGAGAGAGAAGCAGGGAAAACTTTTGACGTCTGTTTTAAGCAGATGAAGGCTTTTGCA GACAGTATTACAAACTGGGCGGATGTAGTAATTGCATATGAGCCTGTTTGGGCTATTGGA ACCGGGAAAGTTGCTACTCCTGAGCAAGCTCAGGAAGTTCATGCTGCTGTTCGTGATTGG TTGAAAACCAACGTGTCACCTGAGGTTGCTTCCGGCATTCGAATTATATATGGAGGTTCT GTAAATGCAGCCAATTGTGCCGAGCTAGCAAAGAAAGAAGATATTGACGGCTTCCTTGTT GGTGGTGCCTCTTTGAAGGGTCCGGATTTTGCCACTATTATCAACTCGGTGACTTCCAAG AAAGTTGCAGCCTGA

Peptide Sequence

PEP ID	Os09t0535000-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:21033111:21036395:-1 gene:Os09g0535000 transcript:Os09t0535000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Triosephosphate isomerase. (Os09t0535000-01);Similar to Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase). (Os09t0535000-02);Similar to Triosephosphate isomerase. (Os09t0535000-03)
Sequence	MAAPSSLASSHLSRLADLRRAGVAAAAPAHPQQLRLGCSRRRAQRVVAMAGSGKFFVGGN WKCNGTKDSVSKLVTELNAATLEPDVDVVVAPPFIYIDQVKNSLTDRIEVSAQNVWIGKG GAYTGEISAEQLVDIGCQWVILGHSERRHVIGEDDQFIGKKAAYALSQNVKVIACIGELL EEREAGKTFDVCFKQMKAFADSITNWADVVIAYEPVWAIGTGKVATPEQAQEVHAAVRDW LKTNVSPEVASGIRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFATIINSVTSK KVAA

Transcript Sequence

Transcript ID	Os09t0535000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21033111:21036395:-1 gene:Os09g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Triosephosphate isomerase. (Os09t0535000-01);Similar to Triosephosphate isomerase, chloroplast precursor (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase). (Os09t0535000-02);Similar to Triosephosphate isomerase. (Os09t0535000-03)
Sequence	GCAGCGCGCGACGAAGGGGATTGGATTGGGTTGGGTTGGATTGGAGAGAGAGAATGGCGG CGCCGTCGTCCCTCGCGTCCTCCCACCTCTCCCGCCTCGCCGACCTCCGCCGCGCAGGCG TCGCCGCCGCCGCCCCGGCGCATCCGCAGCAGCTCCGCCTCGGGTGCTCCCGCCGCCGCG CCCAGCGCGTCGTCGCCATGGCCGGATCCGGCAAGTTCTTCGTTGGAGGCAACTGGAAGT GCAATGGAACGAAGGACTCTGTCAGCAAGCTTGTGACTGAATTGAATGCTGCTACACTTG AACCTGATGTTGATGTTGTGGTTGCACCACCATTCATTTATATTGATCAGGTTAAGAACT CACTAACTGATCGTATTGAGGTATCTGCTCAGAATGTTTGGATTGGAAAAGGAGGAGCAT ACACTGGAGAGATCAGTGCGGAGCAATTGGTGGACATTGGCTGCCAATGGGTTATTCTTG GGCATTCAGAGCGTAGACATGTCATTGGTGAAGATGATCAGTTTATTGGGAAGAAGGCTG CATATGCCTTGAGTCAAAATGTAAAGGTTATTGCCTGCATAGGGGAGCTGTTGGAAGAGA GAGAAGCAGGGAAAACTTTTGACGTCTGTTTTAAGCAGATGAAGGCTTTTGCAGACAGTA TTACAAACTGGGCGGATGTAGTAATTGCATATGAGCCTGTTTGGGCTATTGGAACCGGGA AAGTTGCTACTCCTGAGCAAGCTCAGGAAGTTCATGCTGCTGTTCGTGATTGGTTGAAAA CCAACGTGTCACCTGAGGTTGCTTCCGGCATTCGAATTATATATGGAGGTTCTGTAAATG CAGCCAATTGTGCCGAGCTAGCAAAGAAAGAAGATATTGACGGCTTCCTTGTTGGTGGTG CCTCTTTGAAGGGTCCGGATTTTGCCACTATTATCAACTCGGTGACTTCCAAGAAAGTTG CAGCCTGATGTAACCCTTCTGTAGAAATAAATGACCCAGAGGCAGCGAGACGGCTACCAC ACCATATTGCTTGATAGAGATACTTCGTGTTCAATCACCGTGCTTGTTTTGGCACACGAG GGAATAATGCAAGATGCCACTGTGTTGTTTTTTCTCATAGACCTGGCTGGCGTTACGAGA GCCTATTATTTGTTAGTGAGTGAGTGACCAATAACACGTGAAAAATTGCTGCTATATGTG GTGTTACCCGACATCTGTGGAAGGCAAGGAATGTTGTGGTGTTGAGCATAATAATCGATG TTGCCGTAGGATCGTTGATCCTCCACACCTT