Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0534800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:21028973:21031996:1 gene:Os09g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:transcription factor IIB description:Transcription initiation factor IIB (General transcription factor TFIIB). (Os09t0534800-01);Similar to Transcription initiation factor IIB. (Os09t0534800-02)
Sequence	ATGAGCGACTCGTTCTGCCCGGACTGCAAGAAGCACACGGAGGTGGCGTTCGACCACTCG GCGGGGGACACAGTGTGCACGGAGTGCGGCCTCGTCCTGGAGGCGCACTCCGTCGACGAG ACCTCCGAGTGGCGGACGTTCGCCAACGAGTCCAGCGACAACGACCCCGTCCGTGTCGGC GGCCCGACCAACCCGCTCCTCACCGACGGCGGCCTCTCCACCGTCATCGCCAAGCCCAAC GGCGCCCAGGGGGAGTTCCTCTCCTCCTCCCTCGGCAGGTGGCAGAACCGCGGCTCCAAC CCCGACCGCTCCCTCATCCTCGCCTTCCGCACCATCGCCAACATGGCCGACAGGTTAGGT CTTGTGGCTACAATCAAGGACCGAGCCAATGAAATATATAAGAAGGTGGAAGATCTCAAG TCTATCAGGGGAAGAAATCAAGATGCCATATTAGCTGCCTGTTTGTATATTGCTTGTAGA CAAGAGGATCGGCCTAGAACTGTAAAAGAAATATGTTCGGTCGCTAATGGAGCAACAAAG AAAGAGATAGGCCGAGCAAAGGAATTTATCGTGAAGCAACTGGAAGTTGAAATGGGTCAA TCTATGGAGATGGGAACCATCCATGCTGGAGATTTCCTGAGGCGTTTCTGTTCAACTCTT GGGATGAACAATCAAGCTGTTAAAGCAGCCCAGGAAGCAGTTCAGCGTTCAGAGGAACTT GATATAAGGAGGAGTCCTATTTCCATTGCGGCTGCTGTCATTTACATGATAACCCAACTC TCAGATGATAAGAAGCCTCTGAAAGACATATCCTTGGCTACTGGTGTGGCAGAAGGTACC ATCAGAAATTCATACAAGGATCTGTATCCCTATGCTTCAAGGCTCATCCCAAACACCTAT GCCAAGGAGGAAGACCTGAAGAATCTGTGCACACCATAG

Peptide Sequence

PEP ID	Os09t0534800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:21028973:21031996:1 gene:Os09g0534800 transcript:Os09t0534800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:transcription factor IIB description:Transcription initiation factor IIB (General transcription factor TFIIB). (Os09t0534800-01);Similar to Transcription initiation factor IIB. (Os09t0534800-02)
Sequence	MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY AKEEDLKNLCTP

Transcript Sequence

Transcript ID	Os09t0534800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:21028973:21031996:1 gene:Os09g0534800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:transcription factor IIB description:Transcription initiation factor IIB (General transcription factor TFIIB). (Os09t0534800-01);Similar to Transcription initiation factor IIB. (Os09t0534800-02)
Sequence	CTTCCTTCTCTTCCTCCTCCTCCTCCACCCCCAAATCGCCTCGACGAGCGGCGCGGCGGC GAGGGCAGGAGAGAGGCGGCGGCGGCGGCGGCGGCGGGGGCGAGATGAGCGACTCGTTCT GCCCGGACTGCAAGAAGCACACGGAGGTGGCGTTCGACCACTCGGCGGGGGACACAGTGT GCACGGAGTGCGGCCTCGTCCTGGAGGCGCACTCCGTCGACGAGACCTCCGAGTGGCGGA CGTTCGCCAACGAGTCCAGCGACAACGACCCCGTCCGTGTCGGCGGCCCGACCAACCCGC TCCTCACCGACGGCGGCCTCTCCACCGTCATCGCCAAGCCCAACGGCGCCCAGGGGGAGT TCCTCTCCTCCTCCCTCGGCAGGTGGCAGAACCGCGGCTCCAACCCCGACCGCTCCCTCA TCCTCGCCTTCCGCACCATCGCCAACATGGCCGACAGGTTAGGTCTTGTGGCTACAATCA AGGACCGAGCCAATGAAATATATAAGAAGGTGGAAGATCTCAAGTCTATCAGGGGAAGAA ATCAAGATGCCATATTAGCTGCCTGTTTGTATATTGCTTGTAGACAAGAGGATCGGCCTA GAACTGTAAAAGAAATATGTTCGGTCGCTAATGGAGCAACAAAGAAAGAGATAGGCCGAG CAAAGGAATTTATCGTGAAGCAACTGGAAGTTGAAATGGGTCAATCTATGGAGATGGGAA CCATCCATGCTGGAGATTTCCTGAGGCGTTTCTGTTCAACTCTTGGGATGAACAATCAAG CTGTTAAAGCAGCCCAGGAAGCAGTTCAGCGTTCAGAGGAACTTGATATAAGGAGGAGTC CTATTTCCATTGCGGCTGCTGTCATTTACATGATAACCCAACTCTCAGATGATAAGAAGC CTCTGAAAGACATATCCTTGGCTACTGGTGTGGCAGAAGGTACCATCAGAAATTCATACA AGGATCTGTATCCCTATGCTTCAAGGCTCATCCCAAACACCTATGCCAAGGAGGAAGACC TGAAGAATCTGTGCACACCATAGGAAATTTTTTTCTTTTCTTTTTTGTCACATAACATGG AAATTAGATTTGCCAGAGAGGAGTAATGTTGTCCTTGGATGTGAGTTTTACTGGCCCATG TATCACTGCACCTAATTTTATGTGCATGGACCTGTTAGAACAAAGTTATCTCGAATCGAA GCTAAGTTATATGCAAAGCTTATTTAGGAATGGC