Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0533900-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:20976449:20980609:-1 gene:Os09g0533900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B5 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-01);Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-02)
Sequence	ATGGGGTCCAAGACGAAGGGGTGCTGCGGGTGGCTGATCGTGGCGCTGGTGGCGTCGCTG GTGGCGACGGCGGCGGTGGTGGCCATCATGAAGAAGAAGGTCGGCGGGGGGAGCGGGCGC AAGCTCAAGCCGCTGCCGGTGCCCGGCCCGCCCGGGGCCATCGACTCCAAGTACGGCGAC GCGCTCGGGGTGGCGCTCCAGTTCTTCCAGGTCCAGAAGGCGGGGAAGCTGGAGAACAAC CAGATCCCGTGGAGGGGGGACTCGGCGCTGGATGATGGGAAACCAGCGGGGCTGGATCTT TCCAAGGGAATGTATGATGCTGGTGATCATATCAAGTTTAGTTTCCCGATGGCCTTCACG GCAACGGTGCTCTCGTGGTCCATACTTGAGTATGGAGATCAGATGAGCGCCACGAAGCAG CTGGACCCTGCGCTTGATGCTCTCCGATGGATCACTGATTTCCTCGTCAATGCGCATCCA TCTGACAATGTGTTCTACATTCAGGTTGGTGATCCTGATCTAGATCACAACTGCTGGGAA AGGCCGGAGACTATGTCTGAGAAAAGACCACTCACACAGATTAACACAAAGTCTCCTGGA TCAGATGTTGCTGCTGAGGCAGCAGCAGCTATGGCATCAGCATCAATTGTTTTCAAATCC AGAGACACTACATATTCTGATTCACTTCTTCAACATGCTCAGAAGTTGTTTACTTTTGCT GATACTTATAAAGGCCTCGCCAGTGACACCTATCCAAAGCTCCAAAACTACTATAATTCT ACTGGTTATCAAGACGAACTCCTGTGGGCAGCGAGTTGGCTCTATCATGCTACAGGAGAC CAAACATACCTCAGTTATGTGACTGTAGAGAATGGAAAAGCTTTTGCTGATTGGGGAAGG CCAACATGGTTCAGTTGGGATGACAAACTTGCAGGGACACAGGTGCTCTTGTCAAGATTA AATTTCTTTGGATCCAAACAGACATCTAATGCTGAAAACATGGGACTCAAAATGTACAGA GACACTGCTGAAGCCGTCATTTGTGGGCTCCTACCAGATTCTCCATCAGCTACTGCCAGT AGGACTGGTGGGGGATTGGTGTGGATAAGTGGATGGAATTCTCTCCAGCATGCCACAAAT GCAGCATTCCTTGCTGTTGTTTACAGTGACTACATGCTCACATCGCAAACAGCAGCAGTG CAATGCAGTGGAAAGTACTACAGTCCTACAGATATACGCAATTTTGCTATATCACAGGCT AATTACATCTTGGGAGACAACCCAATGAAGCTTAGCTACCTGGTTGGATATGGGAGCAGC TACCCACAGCAGGTACACCACAGAGGGGCGTCGATCCCCGCTGATGCAAAGACAGGCTGC AAAGGATTCCAGTATCTTCATTCTACGAGCCCAAACCCAAACGTCGCCATGGGAGCCCTC GTGGGCGGGCCGTTCCAGAATGACACTTTCGTCGACTCTCGGGACAATGCTGTTCAGACA GAGTCAAGCACTTACAACAGCGGCACCCTCGTTGGTCTTCTTTCTGGTCTGGTCACAACT TCCTCTGTGGCGCAGTCGTTCACCTAG

Peptide Sequence

PEP ID	Os09t0533900-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:20976449:20980609:-1 gene:Os09g0533900 transcript:Os09t0533900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B5 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-01);Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-02)
Sequence	MGSKTKGCCGWLIVALVASLVATAAVVAIMKKKVGGGSGRKLKPLPVPGPPGAIDSKYGD ALGVALQFFQVQKAGKLENNQIPWRGDSALDDGKPAGLDLSKGMYDAGDHIKFSFPMAFT ATVLSWSILEYGDQMSATKQLDPALDALRWITDFLVNAHPSDNVFYIQVGDPDLDHNCWE RPETMSEKRPLTQINTKSPGSDVAAEAAAAMASASIVFKSRDTTYSDSLLQHAQKLFTFA DTYKGLASDTYPKLQNYYNSTGYQDELLWAASWLYHATGDQTYLSYVTVENGKAFADWGR PTWFSWDDKLAGTQVLLSRLNFFGSKQTSNAENMGLKMYRDTAEAVICGLLPDSPSATAS RTGGGLVWISGWNSLQHATNAAFLAVVYSDYMLTSQTAAVQCSGKYYSPTDIRNFAISQA NYILGDNPMKLSYLVGYGSSYPQQVHHRGASIPADAKTGCKGFQYLHSTSPNPNVAMGAL VGGPFQNDTFVDSRDNAVQTESSTYNSGTLVGLLSGLVTTSSVAQSFT

Transcript Sequence

Transcript ID	Os09t0533900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20976449:20980609:-1 gene:Os09g0533900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glycoside hydrolase OsGH9B5 description:Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-01);Similar to CEL5=CELLULASE 5 (Fragment). (Os09t0533900-02)
Sequence	GCCGAGCAGCGCCGCGGAGGCGTCGTCGTCTCCGGTGGGTTGCAGGAGGCGAATGCGATG GGGTCCAAGACGAAGGGGTGCTGCGGGTGGCTGATCGTGGCGCTGGTGGCGTCGCTGGTG GCGACGGCGGCGGTGGTGGCCATCATGAAGAAGAAGGTCGGCGGGGGGAGCGGGCGCAAG CTCAAGCCGCTGCCGGTGCCCGGCCCGCCCGGGGCCATCGACTCCAAGTACGGCGACGCG CTCGGGGTGGCGCTCCAGTTCTTCCAGGTCCAGAAGGCGGGGAAGCTGGAGAACAACCAG ATCCCGTGGAGGGGGGACTCGGCGCTGGATGATGGGAAACCAGCGGGGCTGGATCTTTCC AAGGGAATGTATGATGCTGGTGATCATATCAAGTTTAGTTTCCCGATGGCCTTCACGGCA ACGGTGCTCTCGTGGTCCATACTTGAGTATGGAGATCAGATGAGCGCCACGAAGCAGCTG GACCCTGCGCTTGATGCTCTCCGATGGATCACTGATTTCCTCGTCAATGCGCATCCATCT GACAATGTGTTCTACATTCAGGTTGGTGATCCTGATCTAGATCACAACTGCTGGGAAAGG CCGGAGACTATGTCTGAGAAAAGACCACTCACACAGATTAACACAAAGTCTCCTGGATCA GATGTTGCTGCTGAGGCAGCAGCAGCTATGGCATCAGCATCAATTGTTTTCAAATCCAGA GACACTACATATTCTGATTCACTTCTTCAACATGCTCAGAAGTTGTTTACTTTTGCTGAT ACTTATAAAGGCCTCGCCAGTGACACCTATCCAAAGCTCCAAAACTACTATAATTCTACT GGTTATCAAGACGAACTCCTGTGGGCAGCGAGTTGGCTCTATCATGCTACAGGAGACCAA ACATACCTCAGTTATGTGACTGTAGAGAATGGAAAAGCTTTTGCTGATTGGGGAAGGCCA ACATGGTTCAGTTGGGATGACAAACTTGCAGGGACACAGGTGCTCTTGTCAAGATTAAAT TTCTTTGGATCCAAACAGACATCTAATGCTGAAAACATGGGACTCAAAATGTACAGAGAC ACTGCTGAAGCCGTCATTTGTGGGCTCCTACCAGATTCTCCATCAGCTACTGCCAGTAGG ACTGGTGGGGGATTGGTGTGGATAAGTGGATGGAATTCTCTCCAGCATGCCACAAATGCA GCATTCCTTGCTGTTGTTTACAGTGACTACATGCTCACATCGCAAACAGCAGCAGTGCAA TGCAGTGGAAAGTACTACAGTCCTACAGATATACGCAATTTTGCTATATCACAGGCTAAT TACATCTTGGGAGACAACCCAATGAAGCTTAGCTACCTGGTTGGATATGGGAGCAGCTAC CCACAGCAGGTACACCACAGAGGGGCGTCGATCCCCGCTGATGCAAAGACAGGCTGCAAA GGATTCCAGTATCTTCATTCTACGAGCCCAAACCCAAACGTCGCCATGGGAGCCCTCGTG GGCGGGCCGTTCCAGAATGACACTTTCGTCGACTCTCGGGACAATGCTGTTCAGACAGAG TCAAGCACTTACAACAGCGGCACCCTCGTTGGTCTTCTTTCTGGTCTGGTCACAACTTCC TCTGTGGCGCAGTCGTTCACCTAGAGCTCTCTCAGAGTTTGGGCAATGGCTTTGACCAAC CGGGAGGATATACATGTAGCCATGTACAATGAGAGATTTTTGGCGTGACCAAAGGCAATG TGCCATCAGCGAAACGCCTTCACGGTGTTCTTCGTTGTTCATCTTTTGGGTGATGGGTGG TTAGCAGTAGTAGTTCTTGTGCCATAGTGCTATTGTTTATACAAATACTGCTGCGTAGTT GCATCCGGTTTGCTGGTGTACTATCTGATACTACGAGTGTTGTATTTGTAGGACGGATTC CATTTGTTGATTCTAAAATGATCTCTGGTAGCTTGTATTGATGATCTGTAAAATCCCTCC CAAGATGAACATTGCACTGAACATGTGAGATCACATGGGGAGAGGGAAGTATTAATCCAG TTTGTTCAGTATGTTCATACATAAATTGGACATCTTTTCAGTATGGTTC