Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0533600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20962267:20967452:-1 gene:Os09g0533600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BROAD-SPECTRUM RESISTANCE 1 description:Similar to Avr9/Cf-9 induced kinase 1. (Os09t0533600-01)
Sequence	ATGAGCTGCTTGGGTTGGTTCAAGAAGCGGAGGTCGTCCAAGAGCAAGGAATCGTCGGGG AGGCGGGGCTCGACGACGACGACGGTGTCGGCGGTGAGCACGAGCAGGTCGGACGACTCC GGGGCGGTGAGGCCGGCGAGCAAGTCGACGGGGTCGACGTCGTCGCACCGGAGCATCTCG TCGCTGTACGAGGAGCGCGGCCACGGCCAGCTCCGGGACTTCGACTACGACGAGCTCCAG GCCGCCACCAACGGCTTCAGCCGCGCCCAGAAGCTCGGCGAGGGCGGCTTCGGCAGCGTC TACAAGGGCTTCGTCCGCTCCTCCCCCGCCGACGGCAAGGCCGCCGATCGCCTCGCCGTC GCCGTCAAGTGCCTGAACCAGCGGGGTCTCCAGGGACATAAGCAGTGGTTGGCGGAAGTA CAGTTCCTTGGGGTTCTTGAGCACCCAAACCTTGTAAAGCTTCTTGGATATTGTGCCGTT GATGGTGAAAGGGGGCCACAAAGATTATTGGTGTATGAGTATATGCCTAATAAGAGCCTG GAAGATCACTTATTCGTCCGAGCTTATCCTCCTCTCTCATGGAATAGAAGGCTTCAAATA ATCTTGGGTGCTGCAGAAGGATTAGCTTACCTGCATGAAGGGCAAGTTCAGGTAATCTAC CGGGACTTCAAAGCATCTAACATTTTGTTGGACAAAGACTTCAGAGCAAAGCTGTCGGAC TTCGGGCTAGCAAGGGAGGGACCAACAGGAGCAAACACTCACGTCTCAACAGCGGTGGTT GGGACGCACGGGTACGCGGCGCCGGACTACATAGAGACGGGGCACCTGACGGTGAAGAGC GACGTGTGGAGCTTCGGGGTGGTGCTGTACGAGATCCTGACGGGGCGGCGGACGCTGGAC CGCCACCGGCCGCAGGGGGAGCAGAAGCTGCTGGAGTGGGTCGCCCAGTTCGCCCCCGAC AGCCGCAACTTCCGCATGATCATGGATCCCAGGCTCCGCGGCGAGTACTCCGTCAAGGCC GCCCGCGACATCGCCAAGCTCGCCGAGTCCTGCCTCCTCAAGAACGCCAAGGAGCGCCCC ACCATGTCCGAGGTCGTCGACGTCCTCCGCCGCGCCGTCCAGTCGCAGCCCGACCCTCCT CCTCCCCCCGCCGCCGCCGCCGCCGCCTCCGGCAAGGGGAAGAGGGTCGACGTCGCGCCG CAGCCGGCGAGGAGGAGGTGA

Peptide Sequence

PEP ID	Os09t0533600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20962267:20967452:-1 gene:Os09g0533600 transcript:Os09t0533600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BROAD-SPECTRUM RESISTANCE 1 description:Similar to Avr9/Cf-9 induced kinase 1. (Os09t0533600-01)
Sequence	MSCLGWFKKRRSSKSKESSGRRGSTTTTVSAVSTSRSDDSGAVRPASKSTGSTSSHRSIS SLYEERGHGQLRDFDYDELQAATNGFSRAQKLGEGGFGSVYKGFVRSSPADGKAADRLAV AVKCLNQRGLQGHKQWLAEVQFLGVLEHPNLVKLLGYCAVDGERGPQRLLVYEYMPNKSL EDHLFVRAYPPLSWNRRLQIILGAAEGLAYLHEGQVQVIYRDFKASNILLDKDFRAKLSD FGLAREGPTGANTHVSTAVVGTHGYAAPDYIETGHLTVKSDVWSFGVVLYEILTGRRTLD RHRPQGEQKLLEWVAQFAPDSRNFRMIMDPRLRGEYSVKAARDIAKLAESCLLKNAKERP TMSEVVDVLRRAVQSQPDPPPPPAAAAAASGKGKRVDVAPQPARRR

Transcript Sequence

Transcript ID	Os09t0533600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20962267:20967452:-1 gene:Os09g0533600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BROAD-SPECTRUM RESISTANCE 1 description:Similar to Avr9/Cf-9 induced kinase 1. (Os09t0533600-01)
Sequence	GTGCGTGCGTGCGTGCTTGCTTGCTGCAAGAAATGAGCTGCTTGGGTTGGTTCAAGAAGC GGAGGTCGTCCAAGAGCAAGGAATCGTCGGGGAGGCGGGGCTCGACGACGACGACGGTGT CGGCGGTGAGCACGAGCAGGTCGGACGACTCCGGGGCGGTGAGGCCGGCGAGCAAGTCGA CGGGGTCGACGTCGTCGCACCGGAGCATCTCGTCGCTGTACGAGGAGCGCGGCCACGGCC AGCTCCGGGACTTCGACTACGACGAGCTCCAGGCCGCCACCAACGGCTTCAGCCGCGCCC AGAAGCTCGGCGAGGGCGGCTTCGGCAGCGTCTACAAGGGCTTCGTCCGCTCCTCCCCCG CCGACGGCAAGGCCGCCGATCGCCTCGCCGTCGCCGTCAAGTGCCTGAACCAGCGGGGTC TCCAGGGACATAAGCAGTGGTTGGCGGAAGTACAGTTCCTTGGGGTTCTTGAGCACCCAA ACCTTGTAAAGCTTCTTGGATATTGTGCCGTTGATGGTGAAAGGGGGCCACAAAGATTAT TGGTGTATGAGTATATGCCTAATAAGAGCCTGGAAGATCACTTATTCGTCCGAGCTTATC CTCCTCTCTCATGGAATAGAAGGCTTCAAATAATCTTGGGTGCTGCAGAAGGATTAGCTT ACCTGCATGAAGGGCAAGTTCAGGTAATCTACCGGGACTTCAAAGCATCTAACATTTTGT TGGACAAAGACTTCAGAGCAAAGCTGTCGGACTTCGGGCTAGCAAGGGAGGGACCAACAG GAGCAAACACTCACGTCTCAACAGCGGTGGTTGGGACGCACGGGTACGCGGCGCCGGACT ACATAGAGACGGGGCACCTGACGGTGAAGAGCGACGTGTGGAGCTTCGGGGTGGTGCTGT ACGAGATCCTGACGGGGCGGCGGACGCTGGACCGCCACCGGCCGCAGGGGGAGCAGAAGC TGCTGGAGTGGGTCGCCCAGTTCGCCCCCGACAGCCGCAACTTCCGCATGATCATGGATC CCAGGCTCCGCGGCGAGTACTCCGTCAAGGCCGCCCGCGACATCGCCAAGCTCGCCGAGT CCTGCCTCCTCAAGAACGCCAAGGAGCGCCCCACCATGTCCGAGGTCGTCGACGTCCTCC GCCGCGCCGTCCAGTCGCAGCCCGACCCTCCTCCTCCCCCCGCCGCCGCCGCCGCCGCCT CCGGCAAGGGGAAGAGGGTCGACGTCGCGCCGCAGCCGGCGAGGAGGAGGTGAGGTTGCA CTCTGCTGCTATCATCGATCACGGCATGAATGAAGAAAGAAAAGTACAGAAAGAGAGACA CAGAGACGAGTTGGTGGATTCTTGGCGTTTTTGTTTTTTGTTTTCCTTTCTATTTTTTAG GCTTATTTAGGATGAGGATAGTAGTATGAGAATACATTTGATTTGATTGGTAGATAACT