Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0532800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20905466:20908479:1 gene:Os09g0532800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peptidase S8 and S53, subtilisin, kexin, sedolisin. (Os09t0532800-01)
Sequence	ATGCTCCCGTCGCCACCGGCGCCGCCGCCGATCTCGCCGGCGCGGCTGCACAAGCTCGTG ACCTCCCAGTCGGACCCGCTCCTCGCGCTCGAGCTAGTCACCGTCACCGCGCCGACCACC GCGCCCCACCCGTCGACGCTCCACGCGCTCGCGCTCCGCCTCTCCCGCCGCCGCGAACAC CTCCCCCACGCGCTCGCGCTCCTGCGCCGCCTCCCGTCGCCGCCCTCCCCGCGGATCCTC CTCCCGCTGCTCCTCTCCGCGCTCCGCCTCCGCCGGCAGCCTCACCTCTTCCTCTCCACC TTCAACTCCCTCTTCGTCTCCGGCCCCAGCCCGTTGCCGCTCCACCCCGAGCTTCTCCTC CGCCTCCTCTCCGTTCTCTCCTCCACCGCTTCCTACTTCCCGTGCGCGCTACACCTCCTC CGCGACGTCTCCACCCGCCTTCCCCTCCCCGAGCCGCTCGTCCTCGCCTCGCACAACCTG CTCATCGAAGCCGCCACCCGCTCCGGCCACCTCGCCGTGTCAATCTCCCTCTTCCATCGC CTCCGCTCCCTCCATGTGTCTCCCAACGCCGAGACATACCGCATCCTGACCCAGTCACTC TGCCGCAGGGGCCAGGTCCACACTGCGGCCACCCTGCTCGACGAAATGCTCCACAGGGGC ATCCCTGCTGACCCACTGGCATACACCACCGTGCTGAATGCGCTCTGCCGTAAGAAGCAG CTTCGAGAGGCTTACCGCTTGCTGTGCCTCATGCGAGGCCGTGGGGTCTCACCTGACATT GTACATTACAACACGGTCATCGTCGGAGTGTGTCGTGAGGGACGGCCACTGGATGCCTGC AAGGTGTTCGGAGATATGAGGGAGAGTGGGTGCGCGCCAAATGCGGTGACATATACTGCG GTGGTGAATGGGTTGTGTGTGAATGGATTATATGACAAGGCAGAGGCATACCTTGATGAT ATGTTGGGCAAAGGGTTACTACCACATTTCTCTGTGTTACATTCAGTGATTAAGGGATGC TGTGCAGTTGGGAAGGTTAATGAGGCTGCAGGGATGATGACTCGAATGCTTGATCTTGGG ATGGTTCCACATGCTGAGACCTGGAGTTCAGTGATCAGGAGTGTTTGTAGTGATGAGGAT AATGTCGAGGTGGTTTTGTTGCAAGTGATGAAAGGAATAAAGCACCGCTCAAACATAAAT TCAAGGAGTACCTGGACATGA

Peptide Sequence

PEP ID	Os09t0532800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20905466:20908479:1 gene:Os09g0532800 transcript:Os09t0532800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peptidase S8 and S53, subtilisin, kexin, sedolisin. (Os09t0532800-01)
Sequence	MLPSPPAPPPISPARLHKLVTSQSDPLLALELVTVTAPTTAPHPSTLHALALRLSRRREH LPHALALLRRLPSPPSPRILLPLLLSALRLRRQPHLFLSTFNSLFVSGPSPLPLHPELLL RLLSVLSSTASYFPCALHLLRDVSTRLPLPEPLVLASHNLLIEAATRSGHLAVSISLFHR LRSLHVSPNAETYRILTQSLCRRGQVHTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQ LREAYRLLCLMRGRGVSPDIVHYNTVIVGVCREGRPLDACKVFGDMRESGCAPNAVTYTA VVNGLCVNGLYDKAEAYLDDMLGKGLLPHFSVLHSVIKGCCAVGKVNEAAGMMTRMLDLG MVPHAETWSSVIRSVCSDEDNVEVVLLQVMKGIKHRSNINSRSTWT

Transcript Sequence

Transcript ID	Os09t0532800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20905466:20908479:1 gene:Os09g0532800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to peptidase S8 and S53, subtilisin, kexin, sedolisin. (Os09t0532800-01)
Sequence	GAGCCCACGCCATCACGGCCTCGCCGATGCTCCCGTCGCCACCGGCGCCGCCGCCGATCT CGCCGGCGCGGCTGCACAAGCTCGTGACCTCCCAGTCGGACCCGCTCCTCGCGCTCGAGC TAGTCACCGTCACCGCGCCGACCACCGCGCCCCACCCGTCGACGCTCCACGCGCTCGCGC TCCGCCTCTCCCGCCGCCGCGAACACCTCCCCCACGCGCTCGCGCTCCTGCGCCGCCTCC CGTCGCCGCCCTCCCCGCGGATCCTCCTCCCGCTGCTCCTCTCCGCGCTCCGCCTCCGCC GGCAGCCTCACCTCTTCCTCTCCACCTTCAACTCCCTCTTCGTCTCCGGCCCCAGCCCGT TGCCGCTCCACCCCGAGCTTCTCCTCCGCCTCCTCTCCGTTCTCTCCTCCACCGCTTCCT ACTTCCCGTGCGCGCTACACCTCCTCCGCGACGTCTCCACCCGCCTTCCCCTCCCCGAGC CGCTCGTCCTCGCCTCGCACAACCTGCTCATCGAAGCCGCCACCCGCTCCGGCCACCTCG CCGTGTCAATCTCCCTCTTCCATCGCCTCCGCTCCCTCCATGTGTCTCCCAACGCCGAGA CATACCGCATCCTGACCCAGTCACTCTGCCGCAGGGGCCAGGTCCACACTGCGGCCACCC TGCTCGACGAAATGCTCCACAGGGGCATCCCTGCTGACCCACTGGCATACACCACCGTGC TGAATGCGCTCTGCCGTAAGAAGCAGCTTCGAGAGGCTTACCGCTTGCTGTGCCTCATGC GAGGCCGTGGGGTCTCACCTGACATTGTACATTACAACACGGTCATCGTCGGAGTGTGTC GTGAGGGACGGCCACTGGATGCCTGCAAGGTGTTCGGAGATATGAGGGAGAGTGGGTGCG CGCCAAATGCGGTGACATATACTGCGGTGGTGAATGGGTTGTGTGTGAATGGATTATATG ACAAGGCAGAGGCATACCTTGATGATATGTTGGGCAAAGGGTTACTACCACATTTCTCTG TGTTACATTCAGTGATTAAGGGATGCTGTGCAGTTGGGAAGGTTAATGAGGCTGCAGGGA TGATGACTCGAATGCTTGATCTTGGGATGGTTCCACATGCTGAGACCTGGAGTTCAGTGA TCAGGAGTGTTTGTAGTGATGAGGATAATGTCGAGGTGGTTTTGTTGCAAGTGATGAAAG GAATAAAGCACCGCTCAAACATAAATTCAAGGAGTACCTGGACATGATATCATGTGGCAT GGATGCAAGGAACACCTATTTTCTGGTGTGTTGTAACAATCAGTTTTGAAAGAAAACAGT AGATGATGTGCAAAATGTGGACCGCAACCATTTTTCTCATCGTATGCAGCTAATTTGATA TTTGAGTTTATTTGTTTATATGCAGGTTAGGAGATATTGTTTGACTTCAACTAAGGTACA CTATCCTGTTTCAAGAAAAAAAAAAGCTATTGCCCTTAATTAAGCATGTAGCGCTATTGA TATTGAGTTCTAGCACTGTTTTGGTAGTACATTTTGTATGTAGATTCTGAATTTCTGATG CTTGTTAGTTAAAACCATACTCTGTTCTAGTAGTAATTTTCAAATACATTTACTCTGAAT CGAGTAGATCATTTACTTTTTCTTATGCCTCTTCAATTGTGCTTTCCTGTAGCTGCAACG GCAGCACCCAGATTCTGCATTCGCAGATCTTATAATCTGCCAAAGCCCAAAGCTTTGATG CCAGGATTCGTGGTTTTGTAGAAATGTGCAGTAAAAACCGAAGTCGTGGTTTTTTCGGCT GCCGAATCAAAGCGTAAGCTGTGGATTGGTTGTAGTGCGGGATGGTACTTTCTGGTTCTG CTGATTCAGAAAAGTGAAACATATGGTTTGCCTTAAAATAGACGCTAGTAAATGGAAAGA ACAACTGCCTTTCAGTCCCAACTTCTTGAGGAGACCTGCACCTTTACTTATGTGGTATGT GTCAGATCATGAAGGTTTTAATTGGAAGGGATGAGATCGAGGTGTGTTTTATCAAGTTAT GCTGTGGAAATGGGTATTAGAATCTGGTGTTAACATTCATATACAAGTAACATCGTGCGA AATTATACTGTAATCTGTATTATGTAGTGCAAGAATCGCAAGTAATCACACTGGCAGTTG GCTTTAACATTAGCCTTTTTATCCTTTGCAGGTTACTCAGACACGATGCTGGAACTGCTA CTTTTTGCTTTGGAAGATCTTAAGATGGTTTTGAAGTCTCAGGAGTCTGATCTTCTCATA GGCTTGGGAAATGCTGAAGATGTTGTTCTCAAGCTTGTAAATGAGGTCACTATGCAAGGT ACAAGCGGGCCTCATTTTCACAGAAGAGGAAGTTGAGTACAGAGTGCGCAATGTTCTGGC CAGTGTTGAATCATCTCTCTCTAATGCATCATACCTATCGGGAAACCCTCCTGAGATAGT GGTTTGGAGTGCCTCATTGTATGACTACAAGAATCCGAGGGAATTGTCAACATCACACAA CCAATTTTTGAAGGAAAAATTACCGATGAACACACCTCTTGCTGCCCCGTCTTTACCTGC TCTGAACATAGAGATAGAGACAGGTGTATTTCAGTTCTCTTTTTTTTTTTGGTTAGTGAT TATATCCTTGATCATTTTTGGTGTGTGCATTGTGATACTTGTGGGCTACTAGCTAATATG TTCAGGTATTTTACTTTTCTTTTTTCCTTCTTGTAGTATAGCGAAGGCAACCGAATATAT TTTTTTTTTCAAAAATGTATTTCACTTTTCTTTGAATCAAATCAATCCATCTCTTTTCCT TGTGATC