Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0531100-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:20799161:20802920:-1 gene:Os09g0531100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0531100-01)
Sequence

ATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCGCTCCGGCCGGCCTCCCAGTCCGCG
CTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGGGGAGCCCCGGCGCTCTCCCCTGCG
AGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAGACTTTGTTATATGCAACTGATAAA
GGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTTGACAGGTTGATCGAGATGCTGAGG
GATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTTGAAAATGTTCTGGCGTTCGATGAG
GGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTATGCAAATCGGATGATGATAAAAAA
GACTATGAAGAATTGGCTGAAAATGTCATGAACATAGTTGACCGTCTTGTCCATAAGACT
GATGAAAAGATTGAACAGTCAACTGATGTGCTGAAGGCAATTATTAGTCCTGTGATGCAC
GAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCGGAGGCTCTCAAATTGATGGAGAAA
GAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGACGAAGGATTTCTGTCAGAGGTTAAT
GCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCAAGCTATGCTGCAG
AAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTACGCTTACAAAGGG
GGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCTGTAATAAAGGCTCCGGAAAACGAG
TGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGGAAAGGAAATGTTTCACCAGAAGAA
TTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTCTTAATTCGCACAGAAGGAGGTTCT
TATCAGCAGCGCATACTCGTTGAATATCTAAAAGAGATACAGGCTAGAGCGGAGGAAGTT
GTGAAGGTGCTTCAAGGACCAACCATATGA

Peptide Sequence

PEP ID

Os09t0531100-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:20799161:20802920:-1 gene:Os09g0531100 transcript:Os09t0531100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0531100-01)
Sequence

MSTAAAAAASTSLRPASQSALRLAGSPRRWCWGAPALSPARRAFHADTRRRKTLLYATDK
GPEESLKKTIEVDRLIEMLRDANPRELDQIVVENVLAFDEGFWVRLAARIDLCKSDDDKK
DYEELAENVMNIVDRLVHKTDEKIEQSTDVLKAIISPVMHEGENATWPPRDPEALKLMEK
EISNREKEGQLDEGFLSEVNAQLRQAKQDGDKPGLQAMLQKVLQLYASNFLQKRSYAYKG
GEVIVPESFLESVIKAPENEWNKLLLDGLTVGKGNVSPEEFYAVIKKRIERVLIRTEGGS
YQQRILVEYLKEIQARAEEVVKVLQGPTI

Transcript Sequence

Transcript ID

Os09t0531100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20799161:20802920:-1 gene:Os09g0531100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0531100-01)
Sequence

GGCTCATCCTCTCTCTCTCCAAATCTGTGGACATTTCACGCGCGCTCTCCGCTCCAGCCT
CCAGCCACCGCCCACCGGCCGGCGATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCG
CTCCGGCCGGCCTCCCAGTCCGCGCTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGG
GGAGCCCCGGCGCTCTCCCCTGCGAGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAG
ACTTTGTTATATGCAACTGATAAAGGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTT
GACAGGTTGATCGAGATGCTGAGGGATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTT
GAAAATGTTCTGGCGTTCGATGAGGGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTA
TGCAAATCGGATGATGATAAAAAAGACTATGAAGAATTGGCTGAAAATGTCATGAACATA
GTTGACCGTCTTGTCCATAAGACTGATGAAAAGATTGAACAGTCAACTGATGTGCTGAAG
GCAATTATTAGTCCTGTGATGCACGAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCG
GAGGCTCTCAAATTGATGGAGAAAGAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGAC
GAAGGATTTCTGTCAGAGGTTAATGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAA
CCAGGACTTCAAGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAA
AAGCGTAGTTACGCTTACAAAGGGGGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCT
GTAATAAAGGCTCCGGAAAACGAGTGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGG
AAAGGAAATGTTTCACCAGAAGAATTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTC
TTAATTCGCACAGAAGGAGGTTCTTATCAGCAGCGCATACTCGTTGAATATCTAAAAGAG
ATACAGGCTAGAGCGGAGGAAGTTGTGAAGGTGCTTCAAGGACCAACCATATGATGATGT
CTGGTGGTCGATTTTAAACAGTGCAGGTTATCCAGTTCGATCATGGTTTTGACGCATCAC
CTAGCAAAAGCTTAGAAGGCGACAACAGACAACCTAACTAGTTGTCTGATTCAGGAACCC
GAGATAAGCATAGCGAGAAGAGAAACAGATCCAAATGTCCTAAAGGAGTGCGTGATTTTC
ATTCCCCACTTTGGTCTTCATCTCGAATGGCCGATTTTGCTGTTGGAATGTTTGATTTCT
GTTCTGTCTGATTGACACTTGACACGAGTGAGCTTGACTAAGCTGTAGTAACATGTGAAT
CGGTTTTTGTTGTGTAAGGGAGAAGGTTCAATGCTGAGCTTGACTTGTTACTGAGGTGCT
TGTTGAACTCATTTTAAGTTACTGATCCCTGCAACTGTTGATT