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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0526500-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:20587554:20588586:-1 gene:Os09g0526500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium/lipid-binding region, CaLB domain containing protein. (Os09t0526500-00)
Sequence

ATGGCGTCGAGGACGATGACACTGGAGGTGACGGTGGTGTCCGCCGAGGAGGTCGTGCTG
CCGCCGACGAGGCGCCCGCTCGGCCGCGGCGCGTACGCGGTGGTGCGCACGGCGGCGTCG
GCGTCGTCGCCGGCGGCGGCGGTGTGCACGCGCGTCGACGAGGAATCGGGCGGCGACTGC
AACGGGTACCCCTACTGGAAGGAGACGCTGCGGGTGGCGTTGCCGGAGGGGGCGCGCTGG
CTGGACGTCGAGATCTGCCGGAGGAGGCCGAACGGCCAGGTGGAGGCGGTGGCGGCGGCG
AGCGTCCCCGTCGGCGACTTCACCGTCGGCCCGCCGGGCCACCTGCATTGCCTCAGCTAC
AGGCTGTTCGACGCCTCCGGGTGCAGGACGCGCCGCAACGGCATCGTCAACATCACCGTC
AGGAGGACGGACGTCAAGTACACCGCGCCGCCGCCGCCGGTGAAAGCTCCGGCGTACGCC
GGCGCGAGCGGGAGCGGCGGCTCTTGCTACGGCGTGCCGCCGGCGGGCGCAGCCATGGGC
TTCCCCGTCGGATTCACGGCCAATGGCAAGGCCTGCGCGTAG

Peptide Sequence

PEP ID

Os09t0526500-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:20587554:20588586:-1 gene:Os09g0526500 transcript:Os09t0526500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium/lipid-binding region, CaLB domain containing protein. (Os09t0526500-00)
Sequence

MASRTMTLEVTVVSAEEVVLPPTRRPLGRGAYAVVRTAASASSPAAAVCTRVDEESGGDC
NGYPYWKETLRVALPEGARWLDVEICRRRPNGQVEAVAAASVPVGDFTVGPPGHLHCLSY
RLFDASGCRTRRNGIVNITVRRTDVKYTAPPPPVKAPAYAGASGSGGSCYGVPPAGAAMG
FPVGFTANGKACA

Transcript Sequence

Transcript ID

Os09t0526500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20587554:20588586:-1 gene:Os09g0526500 gene_biotype:protein_coding transcript_biotype:protein_coding description:C2 calcium/lipid-binding region, CaLB domain containing protein. (Os09t0526500-00)
Sequence

AAATACTACCGATTTTAGTTCGTCTTTCAAATTTCCGATTCGGTTTCTAACCTCTCAAGT
CTCAACTCGATATAAGCAGCGGTCGCCGTGATCCGCACCGATCGTGCCCTAGGTTTTCCT
TCCGATCCGCAAGCTCGCAAACGCAACGCCGCGTGCAAATGGCGTCGAGGACGATGACAC
TGGAGGTGACGGTGGTGTCCGCCGAGGAGGTCGTGCTGCCGCCGACGAGGCGCCCGCTCG
GCCGCGGCGCGTACGCGGTGGTGCGCACGGCGGCGTCGGCGTCGTCGCCGGCGGCGGCGG
TGTGCACGCGCGTCGACGAGGAATCGGGCGGCGACTGCAACGGGTACCCCTACTGGAAGG
AGACGCTGCGGGTGGCGTTGCCGGAGGGGGCGCGCTGGCTGGACGTCGAGATCTGCCGGA
GGAGGCCGAACGGCCAGGTGGAGGCGGTGGCGGCGGCGAGCGTCCCCGTCGGCGACTTCA
CCGTCGGCCCGCCGGGCCACCTGCATTGCCTCAGCTACAGGCTGTTCGACGCCTCCGGGT
GCAGGACGCGCCGCAACGGCATCGTCAACATCACCGTCAGGAGGACGGACGTCAAGTACA
CCGCGCCGCCGCCGCCGGTGAAAGCTCCGGCGTACGCCGGCGCGAGCGGGAGCGGCGGCT
CTTGCTACGGCGTGCCGCCGGCGGGCGCAGCCATGGGCTTCCCCGTCGGATTCACGGCCA
ATGGCAAGGCCTGCGCGTAGAATGGTAAATATCATTCAGTTAGGAAAGGATTAAACCGAA
ATTGGGATTGGGTCTCGACATTGCAATTTTTTAATTGTTGATAAAGATTCTGATGAATTC
ATCAGGAAATTGAAACAAATTAGCACATCAGTTTTTTCTTTTCTGCGAGGAGAGCAGATC
AGATTTTGTTCATGTTTTTCTTATTCTTCATGTGCTGAAGAAAAAAGAAAAGCAGAATCC
TGCTCAGGTTGTAAAAAGGATTACGTTGATTTTTTTTCTACGTGGTATTTGATTTGTTTG
ATTGTTTAAGACT