Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0521900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20389919:20393906:1 gene:Os09g0521900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REDUCED ADH ACTIVITY description:Holliday junction resolvase, 5'-flap endonuclease, Homologous recombinational DNA repair, Microspore development (Os09t0521900-01)
Sequence	ATGGGGGTGGGGGGAAGCTTCTGGGACCTGCTCAAGCCGTACGCGCGGCACGAGGGCGCG GGGTACCTCCGCGGCCGCCGCGTCGCCGTCGACCTCTCCTTCTGGGTCGTCTCCCACAGC GCCGCCATCCGGGCGCGCTCGCCGCACGCGCGCCTCCCCCATCTCCGCACCCTCTTCTTC CGCACCCTCTCCCTCTTCTCCAAGATGGGTGCTTTTCCTGTGTTCGTGGTGGACGGCCAG CCGTCGCCGCTCAAGTCGCAGGTGAGGGCCGCGCGATTCTTCAGAGGATCTGGAATGGAC CTCGCTGCGCTGCCGAGCACGGAGGCGGAGGCCAGTGCGGATGCGCTGGTTCAACCGAGG AATGCCAAGTTCACGCGATACGTGGAGGATTGCGTGGAACTGCTTGAATATCTTGGAATG CCTGTGCTGCGGGCAAAAGGTGAAGGTGAAGCTCTTTGTGCTCAGTTGAATAATCAAGGC CATGTAGATGCTTGCATCACTTCAGACAGTGACGCTTTCCTCTTTGGGGCTAAGACTGTC ATAAAGGTTCTCCGATCGAATTGTAAGGAACCTTTTGAGTGCTACAACATGGCAGACATT GAGTCTGGTCTTGGACTAAAGAGGAAACAAATGGTAGCAATGGCACTTCTTGTTGGCAGT GACCATGACTTGCATGGTGTGCCTGGTTTTGGTCCTGAGACTGCACTTCGGTTTGTGCAG TTATTTGATGAAGATAATGTTCTAGCTAAATTATATGAAATTGGTAAAGGGGTCTATCCA TTTATAGGAGTTAGTGCGCCCAATATTGATGATCTCCCATCACCCTCCACAAAGAGTCTA CCGCGTGCGCGATCACCGCACTGCTCACATTGTGGTCACCCTGGCAACAAGAAAAATCAT ATCAAGGATGGGTGCAACTTTTGCTTGGTTGATTCATTAGAGAATTGTGTGGAGAAGCCA GCTGGATTCATATGTGAATGTCCTAGTTGTGACAAGGCACGTGATCTGAAGGTGCAGAGA AGAAATGAAAACTGGCAAATCAAGGTCTGTAAAAGGATAGCTGCTGAGACTAACTTTCCA AATGAGGAGATCATTAACTTGTACTTGAATGATGACAATTTGGATAATGAAAATGGTGTT CCATTGCTTACATGGAATAAACCTGATATGGAGATTTTGGTTGACTTCTTATCTTTCAAG CAGAACTGGGAGCCAGCGTATATTCGTCAGCGGATGCTTCCTATGCTATCAACCATATAT TTACGCGAAATGGCTTCATCTCAATCTAAATCATTTCTTCTTTATGATCAATATAAATTT CATTCAATCCAACGGATTAAGATAAGATATGGTCACCCATATTACTTGGTCAAGTGGAAG AGAGTCACTCGTAGTATGATATCCAATGATCCACCTAGCAAGCAGACAGAATTGGAGGGG AAGAATGATAAGGTGGAGGTATTGGATGGAGATGATGAGGTAGTAGATGAAGAGGAGGAG GAGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGAGCCAGATGTTCCACAAGTA CTGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGACATTGAGCTAGTGAATGCT GCATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAGGCTGAAAGAAGCAAAGTCA ATAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAACACCAAAAGGTCCAAGGCCT AGTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAAGAAAGGGCTGAGTGGCGAC TCAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCTCAGCAAGAACTTGCCCAAG TCTGTCCGACGACGCCTCCTCTTCGACTGA

Peptide Sequence

PEP ID	Os09t0521900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20389919:20393906:1 gene:Os09g0521900 transcript:Os09t0521900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REDUCED ADH ACTIVITY description:Holliday junction resolvase, 5'-flap endonuclease, Homologous recombinational DNA repair, Microspore development (Os09t0521900-01)
Sequence	MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFF RTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPR NAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTV IKVLRSNCKEPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQ LFDEDNVLAKLYEIGKGVYPFIGVSAPNIDDLPSPSTKSLPRARSPHCSHCGHPGNKKNH IKDGCNFCLVDSLENCVEKPAGFICECPSCDKARDLKVQRRNENWQIKVCKRIAAETNFP NEEIINLYLNDDNLDNENGVPLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIY LREMASSQSKSFLLYDQYKFHSIQRIKIRYGHPYYLVKWKRVTRSMISNDPPSKQTELEG KNDKVEVLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLDDDKDCFLLTDEDIELVNA AFPDEAQRFQEEQRLKEAKSIARKSKLNVAGFETPKGPRPSGVQLSIKEFYRSKKGLSGD SGKDGSRKSSDVDLSKNLPKSVRRRLLFD

Transcript Sequence

Transcript ID	Os09t0521900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20389919:20393906:1 gene:Os09g0521900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:REDUCED ADH ACTIVITY description:Holliday junction resolvase, 5'-flap endonuclease, Homologous recombinational DNA repair, Microspore development (Os09t0521900-01)
Sequence	ACCTGCAGCGACCCAACCCGACCCAACCCAACTCGCGCGAGCCCTGCGGTTTCGCCGGCG AAACGAGGCCGACCTAAACCCTCCGCCGCCGCCGCCGCCGTCGCCGGGGAAGAAGAGAGA TGGGGGTGGGGGGAAGCTTCTGGGACCTGCTCAAGCCGTACGCGCGGCACGAGGGCGCGG GGTACCTCCGCGGCCGCCGCGTCGCCGTCGACCTCTCCTTCTGGGTCGTCTCCCACAGCG CCGCCATCCGGGCGCGCTCGCCGCACGCGCGCCTCCCCCATCTCCGCACCCTCTTCTTCC GCACCCTCTCCCTCTTCTCCAAGATGGGTGCTTTTCCTGTGTTCGTGGTGGACGGCCAGC CGTCGCCGCTCAAGTCGCAGGTGAGGGCCGCGCGATTCTTCAGAGGATCTGGAATGGACC TCGCTGCGCTGCCGAGCACGGAGGCGGAGGCCAGTGCGGATGCGCTGGTTCAACCGAGGA ATGCCAAGTTCACGCGATACGTGGAGGATTGCGTGGAACTGCTTGAATATCTTGGAATGC CTGTGCTGCGGGCAAAAGGTGAAGGTGAAGCTCTTTGTGCTCAGTTGAATAATCAAGGCC ATGTAGATGCTTGCATCACTTCAGACAGTGACGCTTTCCTCTTTGGGGCTAAGACTGTCA TAAAGGTTCTCCGATCGAATTGTAAGGAACCTTTTGAGTGCTACAACATGGCAGACATTG AGTCTGGTCTTGGACTAAAGAGGAAACAAATGGTAGCAATGGCACTTCTTGTTGGCAGTG ACCATGACTTGCATGGTGTGCCTGGTTTTGGTCCTGAGACTGCACTTCGGTTTGTGCAGT TATTTGATGAAGATAATGTTCTAGCTAAATTATATGAAATTGGTAAAGGGGTCTATCCAT TTATAGGAGTTAGTGCGCCCAATATTGATGATCTCCCATCACCCTCCACAAAGAGTCTAC CGCGTGCGCGATCACCGCACTGCTCACATTGTGGTCACCCTGGCAACAAGAAAAATCATA TCAAGGATGGGTGCAACTTTTGCTTGGTTGATTCATTAGAGAATTGTGTGGAGAAGCCAG CTGGATTCATATGTGAATGTCCTAGTTGTGACAAGGCACGTGATCTGAAGGTGCAGAGAA GAAATGAAAACTGGCAAATCAAGGTCTGTAAAAGGATAGCTGCTGAGACTAACTTTCCAA ATGAGGAGATCATTAACTTGTACTTGAATGATGACAATTTGGATAATGAAAATGGTGTTC CATTGCTTACATGGAATAAACCTGATATGGAGATTTTGGTTGACTTCTTATCTTTCAAGC AGAACTGGGAGCCAGCGTATATTCGTCAGCGGATGCTTCCTATGCTATCAACCATATATT TACGCGAAATGGCTTCATCTCAATCTAAATCATTTCTTCTTTATGATCAATATAAATTTC ATTCAATCCAACGGATTAAGATAAGATATGGTCACCCATATTACTTGGTCAAGTGGAAGA GAGTCACTCGTAGTATGATATCCAATGATCCACCTAGCAAGCAGACAGAATTGGAGGGGA AGAATGATAAGGTGGAGGTATTGGATGGAGATGATGAGGTAGTAGATGAAGAGGAGGAGG AGCCTACAATGATTTCCGAAACTACTGAACTGCTAGATGAGCCAGATGTTCCACAAGTAC TGGATGATGATAAAGATTGCTTTTTATTAACTGATGAAGACATTGAGCTAGTGAATGCTG CATTTCCTGATGAAGCACAAAGATTTCAGGAAGAACAGAGGCTGAAAGAAGCAAAGTCAA TAGCACGGAAATCCAAGCTCAACGTGGCAGGTTTCGAAACACCAAAAGGTCCAAGGCCTA GTGGAGTTCAGCTTAGCATCAAGGAGTTCTACCGCTCCAAGAAAGGGCTGAGTGGCGACT CAGGGAAGGACGGCTCAAGAAAATCCTCCGATGTGGACCTCAGCAAGAACTTGCCCAAGT CTGTCCGACGACGCCTCCTCTTCGACTGACTGACAATTGGTCTCCCTTCTGTCTTCCCAG TAGTCCTGCTGCTACTGTTGTACATGTTCCAGTAACATTTCTTTCGGCCAATGGATGTAC ATTGCGTGGCCCGGTTTTTGTACAGGGAACATGCATGTCTTGTAGCTGATGAGAAACAGT GTTTTGGGGGTTGAATCTTGTATCTGCTGCAACCATGTATATTTCATGCCATATCGCATC ACTGCTTGCGTAGCATGGAAGAATTGGACCTG