Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0521400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20367529:20371141:1 gene:Os09g0521400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HMG-CoA synthase. (Os09t0521400-01)
Sequence	ATGGACGGCCGCAAGGATGTCGGGATCCTCGCCATGGATATCTACTTCCCGCCCACCTGC GTCCTCCAGGAATCGCTCGAGGCTCATGACGGCGCCAGCAAAGGGAAGTACACCATTGGT CTCGGCCAAGATTGCATGGCCTTCTGCAGTGAGGTGGAGGATGTCATCTCGATGAGCATG ACAGTTGTCACATCCCTGCTGAAAAAATACAAGGTCGATCCAAAGCTGATTGGTCGATTG GAGGTTGGCAGTGAGACAGTCATAGACAAGAGCAAATCCATCAAGACTTGGCTGATGCAG ATTTTCGAGGAATGCGGTAATACTGACATTGAAGGAGTTGATTCCAGTAACGCGTGTTAT GGTGGGACAGCAGCGCTGTTGAATTGTGTGAACTGGGTTGAGAGTAACTCCTGGGATGGA CGCTATGGCCTTGTTGTTTGCACGGACAGCGCGGTTTATGCGGAAGGCCCAGCTCGTCCG ACAGGTGGTGCTGCTGCTATTGCAATGCTCATTGGTCCTAATGCTCCTATTGCATTCGAG AGCAAATACAAAGCTTCTCACATGGCTCACGTCTATGATTTCTATAAGCCTGATCTTGCA AGTGAATATCCGGTCGTTGATGGAAAACTATCCCAAACATGCTACTTGATGGCGCTAGAC TCATGCTACAGACAGTTTTGTAAGAAGTATGAAAAGCTGGCGGGGAAACAATTCTCAATT TCTGATGCAGATTACTTTGTTTTCCATTCTCCATACAACAAGCTTGTGCAGAAGAGTTTT GCTCGGCTTTACTATAATGATTTCACGCGCGACTGCAGCTCTGTTGACAATGATGCTAAA GAGAAGCTCCAGCCTTTCTCAAATTTGACTGGCGAGGAGAGCTACCAAAGTCGTGACTTG GAAAAGGCTTCACAACAAGTAGCAAAGCCCTTGTATGACATCAAAGTTCAACCATCAACT TTGCTTCCAAAACAAATTGGTAACATGTACACAGCATCTCTTTATGCTGCGTTGGCGTCT GTACTCTATAACAAGCATGCTAGTCTGGATGACCAACGAATTGTTATGTTCTCGTACGGC AGTGGCTTGACATCCACTATGTTTTCGTTGAAACTTAACAATGGCCAGGACCCCTTCAGT TTATCAAACATTGCTTCAGTGCTTAATGCCACGGAGAAGCTTGAGTCAAGACATATGACC TTGCCCGAGAAATTTGTGGAGACGCTGAAGCTGATGGAGCACCGATACGGCGCAAAAGAT TTCGAGACGTGCAAAGACACGAGCTTGTTGCCTCCTGGGACGTTCTACCTCACCAGGGTT GACTCCATGTACCGAAGATTCTATGAGAGGAAGGCCGACGAGGAGATCGCTGCAGCCAAA GCCAAGTACAGTAATGGACATGCCACCAATGGCTATGCCAATGGCCACTAG

Peptide Sequence

PEP ID	Os09t0521400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20367529:20371141:1 gene:Os09g0521400 transcript:Os09t0521400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HMG-CoA synthase. (Os09t0521400-01)
Sequence	MDGRKDVGILAMDIYFPPTCVLQESLEAHDGASKGKYTIGLGQDCMAFCSEVEDVISMSM TVVTSLLKKYKVDPKLIGRLEVGSETVIDKSKSIKTWLMQIFEECGNTDIEGVDSSNACY GGTAALLNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPIAFE SKYKASHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYRQFCKKYEKLAGKQFSI SDADYFVFHSPYNKLVQKSFARLYYNDFTRDCSSVDNDAKEKLQPFSNLTGEESYQSRDL EKASQQVAKPLYDIKVQPSTLLPKQIGNMYTASLYAALASVLYNKHASLDDQRIVMFSYG SGLTSTMFSLKLNNGQDPFSLSNIASVLNATEKLESRHMTLPEKFVETLKLMEHRYGAKD FETCKDTSLLPPGTFYLTRVDSMYRRFYERKADEEIAAAKAKYSNGHATNGYANGH

Transcript Sequence

Transcript ID	Os09t0521400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20367529:20371141:1 gene:Os09g0521400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HMG-CoA synthase. (Os09t0521400-01)
Sequence	TCTCCATCTCTCCTCTCTGCTCTAGCGTGGGCGGAGAACACGAGGCGTGGCCGCGTCGTC GTCGGAGGAGGGAGCAGAGATGGACGGCCGCAAGGATGTCGGGATCCTCGCCATGGATAT CTACTTCCCGCCCACCTGCGTCCTCCAGGAATCGCTCGAGGCTCATGACGGCGCCAGCAA AGGGAAGTACACCATTGGTCTCGGCCAAGATTGCATGGCCTTCTGCAGTGAGGTGGAGGA TGTCATCTCGATGAGCATGACAGTTGTCACATCCCTGCTGAAAAAATACAAGGTCGATCC AAAGCTGATTGGTCGATTGGAGGTTGGCAGTGAGACAGTCATAGACAAGAGCAAATCCAT CAAGACTTGGCTGATGCAGATTTTCGAGGAATGCGGTAATACTGACATTGAAGGAGTTGA TTCCAGTAACGCGTGTTATGGTGGGACAGCAGCGCTGTTGAATTGTGTGAACTGGGTTGA GAGTAACTCCTGGGATGGACGCTATGGCCTTGTTGTTTGCACGGACAGCGCGGTTTATGC GGAAGGCCCAGCTCGTCCGACAGGTGGTGCTGCTGCTATTGCAATGCTCATTGGTCCTAA TGCTCCTATTGCATTCGAGAGCAAATACAAAGCTTCTCACATGGCTCACGTCTATGATTT CTATAAGCCTGATCTTGCAAGTGAATATCCGGTCGTTGATGGAAAACTATCCCAAACATG CTACTTGATGGCGCTAGACTCATGCTACAGACAGTTTTGTAAGAAGTATGAAAAGCTGGC GGGGAAACAATTCTCAATTTCTGATGCAGATTACTTTGTTTTCCATTCTCCATACAACAA GCTTGTGCAGAAGAGTTTTGCTCGGCTTTACTATAATGATTTCACGCGCGACTGCAGCTC TGTTGACAATGATGCTAAAGAGAAGCTCCAGCCTTTCTCAAATTTGACTGGCGAGGAGAG CTACCAAAGTCGTGACTTGGAAAAGGCTTCACAACAAGTAGCAAAGCCCTTGTATGACAT CAAAGTTCAACCATCAACTTTGCTTCCAAAACAAATTGGTAACATGTACACAGCATCTCT TTATGCTGCGTTGGCGTCTGTACTCTATAACAAGCATGCTAGTCTGGATGACCAACGAAT TGTTATGTTCTCGTACGGCAGTGGCTTGACATCCACTATGTTTTCGTTGAAACTTAACAA TGGCCAGGACCCCTTCAGTTTATCAAACATTGCTTCAGTGCTTAATGCCACGGAGAAGCT TGAGTCAAGACATATGACCTTGCCCGAGAAATTTGTGGAGACGCTGAAGCTGATGGAGCA CCGATACGGCGCAAAAGATTTCGAGACGTGCAAAGACACGAGCTTGTTGCCTCCTGGGAC GTTCTACCTCACCAGGGTTGACTCCATGTACCGAAGATTCTATGAGAGGAAGGCCGACGA GGAGATCGCTGCAGCCAAAGCCAAGTACAGTAATGGACATGCCACCAATGGCTATGCCAA TGGCCACTAGTGGCACGCATGGCATGATGGCTGCTGCTGATATTGATTTCTGGTTTGATA AGTTCATGATTAGGTGTTTCCAGCCTAGTGTAGTAGTTTCTCAAATAAGTGTTCTCCACA CCTGTTATCCATATCTCCTCTAATTTTTTTGTATTGAATCAGACAGACTAGTGAGACATT TCTGTAGTATCAATCATTCTTGTTTCTTCTAGCTTGTGTTTCTGCTGTCACTTGAAGTTA TTACTATGGACTAGTTTAGC