Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0520200-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:20316914:20321175:1 gene:Os09g0520200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to abhydrolase domain-containing protein 5. (Os09t0520200-00)
Sequence

ATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGGCGGAG
GGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGGCGGGG
TCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCGACCGC
ATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAGAACAA
GTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAAGTGAT
GAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCCTTGTC
ATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCCTTGCA
AGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGACCTGAC
TTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGGAATGG
CGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGATATGTT
GCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCGGCCCT
GCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAGCTACA
TGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCAAAGAATAGTG
AGAGGATTGGGTCCTTGGGGACCAGGCTTAGTTCAGAGATATACCAGTGCCAGATTTGGC
TCACATTCAACAGGTGAATTACTAACAGAACAGGAATCCACATTACTGACAGATTACATT
TACCATACTTTGGCTGCCAAAGCTAGTGGAGAGTTGTGCTTAAAACATATATTTTCCTTT
GGGGCATTCGTGAGGAAACCTCTTCTGCAAAGTGCATCCGATTGGAAAGTGCCAACTACT
TTCATATATGGCCAACAAGATTGGATGAATTACCAAGGTGCACAGCAAGCACGGAAAGAA
ATGAAAGTCCCCTGTGAGATCATCAGAGTTCCACAGGCAAGACATTTTGTGTTCATAGAT
AATCCTTCGGGGTTCCACTCCGCGGTCTTCCACGCATGCCGCAAGTTTCTATCTGGAGAT
GGAGAGGAAGGCCTCTCTCTTCCTGAAGGCCTAACATCGGCCTGA

Peptide Sequence

PEP ID

Os09t0520200-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:20316914:20321175:1 gene:Os09g0520200 transcript:Os09t0520200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to abhydrolase domain-containing protein 5. (Os09t0520200-00)
Sequence

MRRAAAAAVTVTTTTRMAAEGMSTAAAAAEATATAAPAAGSRWGRAWPSALRWIPTSTDR
IIAAEKRLLSIVKTGYVQEQVNIGSSPPGSKVRWFRSSSDEPRFINTVTFDSEENAPTLV
MVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW
RKAKNLSNFILLGHSFGGYVAAKYALQHPEHVQHLILVGPAGFSSETEHSSEWLTKFRAT
WKGMLVNHLWESNFTPQRIVRGLGPWGPGLVQRYTSARFGSHSTGELLTEQESTLLTDYI
YHTLAAKASGELCLKHIFSFGAFVRKPLLQSASDWKVPTTFIYGQQDWMNYQGAQQARKE
MKVPCEIIRVPQARHFVFIDNPSGFHSAVFHACRKFLSGDGEEGLSLPEGLTSA

Transcript Sequence

Transcript ID

Os09t0520200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20316914:20321175:1 gene:Os09g0520200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to abhydrolase domain-containing protein 5. (Os09t0520200-00)
Sequence

ACTCCGCCGAGAAGAAGAGGCGACGAGAGTGACAGGCCGAGGAGGGAGGGGGATTCGAGG
ATCGCATGCGCCGTGCCGCCGCCGCCGCCGTGACGGTGACGACGACGACGAGGATGGCGG
CGGAGGGGATGTCCACGGCCGCCGCGGCAGCGGAGGCGACGGCGACGGCGGCGCCCGCGG
CGGGGTCGAGGTGGGGGAGGGCGTGGCCGTCCGCGCTGCGCTGGATCCCGACCTCCACCG
ACCGCATCATCGCCGCCGAGAAGCGGCTCCTCTCCATAGTCAAAACTGGCTATGTCCAAG
AACAAGTTAACATTGGCTCCTCTCCACCCGGATCAAAAGTTAGATGGTTTAGATCATCAA
GTGATGAGCCAAGATTCATCAATACTGTAACATTTGATAGCGAAGAAAATGCTCCCACCC
TTGTCATGGTCCATGGGTATGGTGCTTCACAGGGTTTCTTCTTTCGAAACTTTGATGCCC
TTGCAAGCCGTTTCAGGGTGATTGCCATTGATCAGCTTGGTTGGGGTGGATCAAGTAGAC
CTGACTTCACTTGTAAAAGTACTGAAGAAACTGAGGCATGGTTCATAGATTCCTTTGAGG
AATGGCGCAAAGCAAAGAATCTCAGTAATTTTATATTGCTCGGTCACTCTTTTGGAGGAT
ATGTTGCGGCAAAGTACGCTTTACAGCATCCTGAGCACGTCCAACACTTGATCTTGGTCG
GCCCTGCTGGCTTTTCATCAGAAACAGAGCATAGCTCTGAGTGGTTAACCAAGTTCCGAG
CTACATGGAAAGGCATGCTAGTGAATCATCTATGGGAGTCCAATTTTACTCCTCAAAGAA
TAGTGAGAGGATTGGGTCCTTGGGGACCAGGCTTAGTTCAGAGATATACCAGTGCCAGAT
TTGGCTCACATTCAACAGGTGAATTACTAACAGAACAGGAATCCACATTACTGACAGATT
ACATTTACCATACTTTGGCTGCCAAAGCTAGTGGAGAGTTGTGCTTAAAACATATATTTT
CCTTTGGGGCATTCGTGAGGAAACCTCTTCTGCAAAGTGCATCCGATTGGAAAGTGCCAA
CTACTTTCATATATGGCCAACAAGATTGGATGAATTACCAAGGTGCACAGCAAGCACGGA
AAGAAATGAAAGTCCCCTGTGAGATCATCAGAGTTCCACAGGCAAGACATTTTGTGTTCA
TAGATAATCCTTCGGGGTTCCACTCCGCGGTCTTCCACGCATGCCGCAAGTTTCTATCTG
GAGATGGAGAGGAAGGCCTCTCTCTTCCTGAAGGCCTAACATCGGCCTGAGATGGCGTCT
CGTACGACAATCTCATCATAGCAACCCAGCACGATTGATGGAAAATACTGTGACCGTTGT
CGCCGTCTTGTTTGTGTTTACACGAGTTGCGTCAACATGTATCATGTAGATATATATACA
CATGTGTACAATTGTACAAGTAGTGAGAAACACACGCATTGCTATGAAA