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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0520100-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:20313593:20315695:-1 gene:Os09g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase delta, subunit 4 family protein. (Os09t0520100-01);DNA polymerase delta, subunit 4 family protein. (Os09t0520100-02)
Sequence

ATGGCTTCTGGTGGCATGAAGGACTTTTACCGGCAGAAGAAGAAAGGAGGTCCCACCAAA
GCATCGTCATCTTCCAAGAAGAAAACACAGCATTACACTGGAGGGGCCTCTGTTGGGGCC
TCAGACACTGCTCAGACATCAGCACTAATTTCTCATGGTAACCTAGATCTTAAAGATGAT
TTCAGTGAGCAAGAGGAGCAGTTGCGACTGTTTGATATGGACATGAAGTTTGGCCCTTGC
ATTGGCGTTACTCGTCTTCAGCGTTGGGAACGTGCTTCTGCCATGGGTCTTCACCCACCA
CCTCATCTCAGGGATCTCTTACTGAACAATACTCATGCAGGCAATCACAATAACAATGGT
CCCTCCCTTGAGTGCCTCTGGGAGGGCAAAGTCTAG

Peptide Sequence

PEP ID

Os09t0520100-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:20313593:20315695:-1 gene:Os09g0520100 transcript:Os09t0520100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase delta, subunit 4 family protein. (Os09t0520100-01);DNA polymerase delta, subunit 4 family protein. (Os09t0520100-02)
Sequence

MASGGMKDFYRQKKKGGPTKASSSSKKKTQHYTGGASVGASDTAQTSALISHGNLDLKDD
FSEQEEQLRLFDMDMKFGPCIGVTRLQRWERASAMGLHPPPHLRDLLLNNTHAGNHNNNG
PSLECLWEGKV

Transcript Sequence

Transcript ID

Os09t0520100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20313593:20315695:-1 gene:Os09g0520100 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase delta, subunit 4 family protein. (Os09t0520100-01);DNA polymerase delta, subunit 4 family protein. (Os09t0520100-02)
Sequence

ATTCCTATCCCGAAAGCTCCCAAACCCTAGCCGGCGAGCGACACCGCCGGGCGCGCGAGG
CGGCGGCTCACGAGCAGCGCCACCGAGGGCGCGAGCGGCCGGCCGGCCGGACGCCGGGGA
GAGTGCCGGTGAGTTCGCGTCTCCCCGCAGCGGCAGCCAGCGAGACGCGGAGCGGCACGA
AGGAAAACATTGGTAGAACTGAAGAATAGACAGATATGGCTTCTGGTGGCATGAAGGACT
TTTACCGGCAGAAGAAGAAAGGAGGTCCCACCAAAGCATCGTCATCTTCCAAGAAGAAAA
CACAGCATTACACTGGAGGGGCCTCTGTTGGGGCCTCAGACACTGCTCAGACATCAGCAC
TAATTTCTCATGGTAACCTAGATCTTAAAGATGATTTCAGTGAGCAAGAGGAGCAGTTGC
GACTGTTTGATATGGACATGAAGTTTGGCCCTTGCATTGGCGTTACTCGTCTTCAGCGTT
GGGAACGTGCTTCTGCCATGGGTCTTCACCCACCACCTCATCTCAGGGATCTCTTACTGA
ACAATACTCATGCAGGCAATCACAATAACAATGGTCCCTCCCTTGAGTGCCTCTGGGAGG
GCAAAGTCTAGAACAAACAAATAGTCTGTACTACTGTAAATCCTGCACTGTTCATAGCTA
CTCGCTATGCCTAGCCCTTCAAACCCCACCCCAACTGATGGATGAATCCCTGTATTTCTT
CTTAGTCGAGGGCTTTGGGCTCAGTCAATGACCTTGTGTTGTCGCAATCCTTTGTTTCTG
CTACGTTTTCTGACAATACTGCAGTGTTTCTTCAGTTTGTTCTTAATCCTAAGCTGTTAC
TAGTAAAAATAAGGAGAATGAGCTGGCAGTGTATCTCCAGTTTGCCCCAAATCCAATGTT
TGCCAAAAGGATAATGTAACTGCTGGTGATTGATGCGAGAAAAAGG