Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0519100-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:20268863:20269717:-1 gene:Os09g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 167 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0519100-00)
Sequence	ATGGACGAGCTGCTCTCGCCGTGCTCGTCGTTCTCGCCGCCCTCGCCGTCGTCCATGTTC TCCACCGGCGCGGCGGCGGCGGCGGCGCACGCGGTGCTCGAGTTCACGTCCTGCGAGGTC CCGGACGAATGGCTGATGGGCGACGTGGTGATGGCCAAGAACGAGGAGGATCTGTCCGAG CTGCCGAGGAGCTTCGAGGCGGCGGCGGCGCAGCGGCCGGCGAAGCGGCGGGGGAGGAAG CCCGGGCCGCGGCCGGACGGGCCGACGGTGAGCCACGTGGAGGCCGAGCGGCAGCGCCGG GAGAAGCTGAACCGCCGGTTCTGCGACCTCCGCGCCGCGGTGCCTACCGTGTCCCGCATG GACAAGGCCTCCCTCCTCGCCGACGCCGCCGCCTACATCGCCGAGCTCCGCGCCCGCGTC GCCCGCCTCGAGTCCGACGCGAGGCAGGCCGCCGCTGCGAGGTTTGAGCCGAGCTCCTGC GGCGGCGGCGGCAACGCCTCGTACCACGGCGGCGGCGGCGGCGGCGGCGCCGCCCCCGGG CTCGACGAGGCCGTGGAGGTGCGCAAGATGGGGCGCGACGCCGCCGCCGTGCGCGTCACC ACGACGGGCGCCCGCCACGCGCCGGCGAGGCTGATGGGCGCGCTCCGCTCCCTCGAGCTG CCGGTGCAGCACGCGTGCGTCATGCGCGTCCACGGCGCCACCACCGTCCAGGAGGTCCTC GTCGACGTCCCCGCCGCGCTCCAGGACGGCGACGCCCTCCGCGCCGCGCTGCTCCAGCGG CTGCAGGACAGCTAG

Peptide Sequence

PEP ID	Os09t0519100-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:20268863:20269717:-1 gene:Os09g0519100 transcript:Os09t0519100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 167 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0519100-00)
Sequence	MDELLSPCSSFSPPSPSSMFSTGAAAAAAHAVLEFTSCEVPDEWLMGDVVMAKNEEDLSE LPRSFEAAAAQRPAKRRGRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRM DKASLLADAAAYIAELRARVARLESDARQAAAARFEPSSCGGGGNASYHGGGGGGGAAPG LDEAVEVRKMGRDAAAVRVTTTGARHAPARLMGALRSLELPVQHACVMRVHGATTVQEVL VDVPAALQDGDALRAALLQRLQDS

Transcript Sequence

Transcript ID	Os09t0519100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20268863:20269717:-1 gene:Os09g0519100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 167 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0519100-00)
Sequence	ATGGACGAGCTGCTCTCGCCGTGCTCGTCGTTCTCGCCGCCCTCGCCGTCGTCCATGTTC TCCACCGGCGCGGCGGCGGCGGCGGCGCACGCGGTGCTCGAGTTCACGTCCTGCGAGGTC CCGGACGAATGGCTGATGGGCGACGTGGTGATGGCCAAGAACGAGGAGGATCTGTCCGAG CTGCCGAGGAGCTTCGAGGCGGCGGCGGCGCAGCGGCCGGCGAAGCGGCGGGGGAGGAAG CCCGGGCCGCGGCCGGACGGGCCGACGGTGAGCCACGTGGAGGCCGAGCGGCAGCGCCGG GAGAAGCTGAACCGCCGGTTCTGCGACCTCCGCGCCGCGGTGCCTACCGTGTCCCGCATG GACAAGGCCTCCCTCCTCGCCGACGCCGCCGCCTACATCGCCGAGCTCCGCGCCCGCGTC GCCCGCCTCGAGTCCGACGCGAGGCAGGCCGCCGCTGCGAGGTTTGAGCCGAGCTCCTGC GGCGGCGGCGGCAACGCCTCGTACCACGGCGGCGGCGGCGGCGGCGGCGCCGCCCCCGGG CTCGACGAGGCCGTGGAGGTGCGCAAGATGGGGCGCGACGCCGCCGCCGTGCGCGTCACC ACGACGGGCGCCCGCCACGCGCCGGCGAGGCTGATGGGCGCGCTCCGCTCCCTCGAGCTG CCGGTGCAGCACGCGTGCGTCATGCGCGTCCACGGCGCCACCACCGTCCAGGAGGTCCTC GTCGACGTCCCCGCCGCGCTCCAGGACGGCGACGCCCTCCGCGCCGCGCTGCTCCAGCGG CTGCAGGACAGCTAG