Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0518500-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:20237772:20240546:1 gene:Os09g0518500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os09t0518500-01);Similar to protein binding protein. (Os09t0518500-02);Similar to protein binding protein. (Os09t0518500-03)
Sequence	GTGAGTGAGATACTGAAGTTTTGTGATCTGCAGTCAGCAGGGCTCAAGGCTACTAACAGT TTCGATGCGTTCCATATTGCGGCGAAGCAGGGCCATCTGGATGTTTTGAAGGAGCTCTTA CAAGCATTTCCAGCATTAGCTATGACAACAAATTCCGTAAATGCCACTGCTTTGGATACT GCTGCCACTCAGGGCCATATTGATATTGTCAATCTTCTGCTGGAAACAGATGCAAGCCTA GCCAGAATAGCTAGAAATAATGGCAAAACAGTTTTGCATTCAGCAGCAAGAATGGGTCAT GTGGAGGTGGTAACAGCATTGTTAAATAAAGATCCAGGGATTGGTTTTAGAACAGATAAG AAAGGACAAACAGCACTGCACATGGCTTCGAAAGGCCAAAATGCTGAAATTCTGCTTGAA TTGTTGAAGCCTGATCTCTCAGTTATCCATGTGGAAGATAACAAAGGGAACAGAGCATTG CATGTTGCAACTCGGAAGGGCAACACCGTTATAGTCCAGACTCTAATATCAGTCAAAGAG ATCGTAATCAATGCAGTTAATAGAGCAGGAGAGACTGCTTTTGCTATTGCAGAGAAACTA GGTAATGAAGAACTTTCTAACATCCTGAGAGAGGTTGGTGGTGAAACTGCAAAAGAGCAA GTAAACCCTCCGAATTCAGCAAAGCAGCTTAAGAAGACAGTTAGCGACATTAGGCATGAC GTCCAATCTGGGATCAAGCAAACACGTCAGACCAAGATGCAATTCCAAAAAATCAAGAAG AGGATTCAAAAGCTTCACATTGGTGGGCTAAACAATGCCATCAACTCCAATACTGTTGTT GCGGTGCTTATTGCCACAGTTGCCTTTGCAGCCATATTTACTATCCCTGGTAATTTTCTG GAAGATATGAAAGATCCACATGATCCCAACATGACCTTAGGGCAAGCATTTGTAGCAAGC AATCCGGCATTTATAATCTTCTTGGTATTTGATGCCTTGGCTCTTTTTATCTCGCTTGCC GTCGTCGTTGTCCAGACCTCTCTAATTGTTGTTGAGCAGAAAGCCAAGAAGAAGATGGTC TTTGTGATGAACAAGCTGATGTGGATGGCATGCCTTTGCATCTCAGCAGCCTTCATAGCA CTAACATATGTCGTCGTGGGCCGTGATGATCGGTGGCTAGCTTGGTGTACAATGGCAATC GGCACCGCGATCATGCTGGCCACCCTTGGGTCCATGTGCTACTGCATTATCGCTCACAGG ATGGAGGAGAAGAACATGAAGAAGATCAGGAGGTCATCCACCAGCCAGTCGTGGTCCATA TCAGTCGATTCGGATACAGAGCTACTGAACAACGAATACAAGAAGATCTATGCACTTTAG

Peptide Sequence

PEP ID	Os09t0518500-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:20237772:20240546:1 gene:Os09g0518500 transcript:Os09t0518500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os09t0518500-01);Similar to protein binding protein. (Os09t0518500-02);Similar to protein binding protein. (Os09t0518500-03)
Sequence	VSEILKFCDLQSAGLKATNSFDAFHIAAKQGHLDVLKELLQAFPALAMTTNSVNATALDT AATQGHIDIVNLLLETDASLARIARNNGKTVLHSAARMGHVEVVTALLNKDPGIGFRTDK KGQTALHMASKGQNAEILLELLKPDLSVIHVEDNKGNRALHVATRKGNTVIVQTLISVKE IVINAVNRAGETAFAIAEKLGNEELSNILREVGGETAKEQVNPPNSAKQLKKTVSDIRHD VQSGIKQTRQTKMQFQKIKKRIQKLHIGGLNNAINSNTVVAVLIATVAFAAIFTIPGNFL EDMKDPHDPNMTLGQAFVASNPAFIIFLVFDALALFISLAVVVVQTSLIVVEQKAKKKMV FVMNKLMWMACLCISAAFIALTYVVVGRDDRWLAWCTMAIGTAIMLATLGSMCYCIIAHR MEEKNMKKIRRSSTSQSWSISVDSDTELLNNEYKKIYAL

Transcript Sequence

Transcript ID	Os09t0518500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20237772:20240546:1 gene:Os09g0518500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os09t0518500-01);Similar to protein binding protein. (Os09t0518500-02);Similar to protein binding protein. (Os09t0518500-03)
Sequence	GTGAGTGAGATACTGAAGTTTTGTGATCTGCAGTCAGCAGGGCTCAAGGCTACTAACAGT TTCGATGCGTTCCATATTGCGGCGAAGCAGGGCCATCTGGATGTTTTGAAGGAGCTCTTA CAAGCATTTCCAGCATTAGCTATGACAACAAATTCCGTAAATGCCACTGCTTTGGATACT GCTGCCACTCAGGGCCATATTGATATTGTCAATCTTCTGCTGGAAACAGATGCAAGCCTA GCCAGAATAGCTAGAAATAATGGCAAAACAGTTTTGCATTCAGCAGCAAGAATGGGTCAT GTGGAGGTGGTAACAGCATTGTTAAATAAAGATCCAGGGATTGGTTTTAGAACAGATAAG AAAGGACAAACAGCACTGCACATGGCTTCGAAAGGCCAAAATGCTGAAATTCTGCTTGAA TTGTTGAAGCCTGATCTCTCAGTTATCCATGTGGAAGATAACAAAGGGAACAGAGCATTG CATGTTGCAACTCGGAAGGGCAACACCGTTATAGTCCAGACTCTAATATCAGTCAAAGAG ATCGTAATCAATGCAGTTAATAGAGCAGGAGAGACTGCTTTTGCTATTGCAGAGAAACTA GGTAATGAAGAACTTTCTAACATCCTGAGAGAGGTTGGTGGTGAAACTGCAAAAGAGCAA GTAAACCCTCCGAATTCAGCAAAGCAGCTTAAGAAGACAGTTAGCGACATTAGGCATGAC GTCCAATCTGGGATCAAGCAAACACGTCAGACCAAGATGCAATTCCAAAAAATCAAGAAG AGGATTCAAAAGCTTCACATTGGTGGGCTAAACAATGCCATCAACTCCAATACTGTTGTT GCGGTGCTTATTGCCACAGTTGCCTTTGCAGCCATATTTACTATCCCTGGTAATTTTCTG GAAGATATGAAAGATCCACATGATCCCAACATGACCTTAGGGCAAGCATTTGTAGCAAGC AATCCGGCATTTATAATCTTCTTGGTATTTGATGCCTTGGCTCTTTTTATCTCGCTTGCC GTCGTCGTTGTCCAGACCTCTCTAATTGTTGTTGAGCAGAAAGCCAAGAAGAAGATGGTC TTTGTGATGAACAAGCTGATGTGGATGGCATGCCTTTGCATCTCAGCAGCCTTCATAGCA CTAACATATGTCGTCGTGGGCCGTGATGATCGGTGGCTAGCTTGGTGTACAATGGCAATC GGCACCGCGATCATGCTGGCCACCCTTGGGTCCATGTGCTACTGCATTATCGCTCACAGG ATGGAGGAGAAGAACATGAAGAAGATCAGGAGGTCATCCACCAGCCAGTCGTGGTCCATA TCAGTCGATTCGGATACAGAGCTACTGAACAACGAATACAAGAAGATCTATGCACTTTAG GATAACAATATAACCTGTGGTCGAGTCTTGTATATATCGAAGCCCGTTTGCCTGATGAAA CTCCATGGCATTCAGCGGAGTTTGACTCACAAAGTATATTTAGGCCTAGAACATGGCAGC TTTGTGCAACTGAAGCCTCCTTTTGTGTAGAGAAAGGAGGCCATCCATCTCACTGCATTT GCTACTATATAGATTCCAGGTGATACTTTGAAGCAGCCACTTTTTTGTAGGCATCATAGG AGTATTGGTAAAGCAGAATGTACTCTTAATGCTCACCAATGTGTATCTGTGGATGATGAT AATGAAAAACCATGCAATTATACTAGTATAGATAGTGGAATAAACTGCCATTTTCTGTC