Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0516600-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:20122516:20127336:-1 gene:Os09g0516600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE II-3 description:Glyoxalase II. (Os09t0516600-01);Glyoxalase II. (Os09t0516600-02)
Sequence

ATGCGGATGCTGTCCAAGGCGTGCTCGCTCGTGGCCTCCTCCCTCCCGCGGTGCTCATCC
TCCGCTGCCCCCACGATCAGAGGGCAGCCGTCGTTGCTGCCAAGCGTGCGCAAGGAATGG
CTTGGCAAGCCGCTGCTGTACGGAATCGGCACGCTGCTCGTCATGCCTCTGAGGACGCTG
CACGGGGTGGGACGGATGTTTGGCGCTGGGCGGTTCCTCTGCAACATGACCAGCGTCTCG
TCGTCGCTGCAAATTGAGCTCGTACCCTGCCTTCAAGATAACTATGCTTACATCCTACAT
GATGTTGATACTGGAACAGTTGGAGTTGTGGACCCTTCTGAAGCAACGCCAATCATAAAT
GCACTAGAAAAAAGAAACCAGAACTTGACCTACATACTGAACACCCATCATCACTATGAC
CATACTGGTGGCAACTTGGAACTGAAGGCAAAATATGGTGCAAAGGTGATTGGTTCTGCA
AAGGATAGGGATAGAATTCCAGGCATTGACATAACTCTTAGTGAGGGTGACACATGGATG
TTTGCTGGTCATCAAGTTCTTGTAATGGAAACTCCTGGTCATACATCAGGTCATGTGTGC
TACCACTTCCCTGGATCTGGAGCAATATTTACAGGGGACACATTGTTTAGTTTGTCATGT
GGAAAGCTTTTTGAAGGGACTCCACAACAGATGTACTCTTCACTCCAGAAAATTATAGCA
CTTCCGGATGAGACAAGAGTGTATTGCGGACATGAATATACATTGAGCAATTCAAAGTTT
GCCTTGAGCATAGAACCAGGAAATAAAGACTTACAGGAATACGCTGCAAATGCCGCTGAT
CTCCGCAAGAGGAATACACCCACGGTGCCAACAACAATTGGGAGAGAGAAGCAGTGCAAT
CCTTTTCTGAGGACCTCAAGTCCAGAGATAAAGAATACCCTGTCCATCCCAGACCATTTT
GATGATGCACGCGTTCTTGAAGTTGTTCGACGAGCGAAGGATAACTTTTAA

Peptide Sequence

PEP ID

Os09t0516600-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:20122516:20127336:-1 gene:Os09g0516600 transcript:Os09t0516600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE II-3 description:Glyoxalase II. (Os09t0516600-01);Glyoxalase II. (Os09t0516600-02)
Sequence

MRMLSKACSLVASSLPRCSSSAAPTIRGQPSLLPSVRKEWLGKPLLYGIGTLLVMPLRTL
HGVGRMFGAGRFLCNMTSVSSSLQIELVPCLQDNYAYILHDVDTGTVGVVDPSEATPIIN
ALEKRNQNLTYILNTHHHYDHTGGNLELKAKYGAKVIGSAKDRDRIPGIDITLSEGDTWM
FAGHQVLVMETPGHTSGHVCYHFPGSGAIFTGDTLFSLSCGKLFEGTPQQMYSSLQKIIA
LPDETRVYCGHEYTLSNSKFALSIEPGNKDLQEYAANAADLRKRNTPTVPTTIGREKQCN
PFLRTSSPEIKNTLSIPDHFDDARVLEVVRRAKDNF

Transcript Sequence

Transcript ID

Os09t0516600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20122516:20127336:-1 gene:Os09g0516600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLYOXALASE II-3 description:Glyoxalase II. (Os09t0516600-01);Glyoxalase II. (Os09t0516600-02)
Sequence

ACTCCTCTCGTCTCGCGTGAGTACTCGCGACCTCACCGCCGGCGGCGACGAGCGGCGGCG
GCGGCGGTTGAGGAAGGAAGGGGGAGGGAGAGCAGGAAATGCGGATGCTGTCCAAGGCGT
GCTCGCTCGTGGCCTCCTCCCTCCCGCGGTGCTCATCCTCCGCTGCCCCCACGATCAGAG
GGCAGCCGTCGTTGCTGCCAAGCGTGCGCAAGGAATGGCTTGGCAAGCCGCTGCTGTACG
GAATCGGCACGCTGCTCGTCATGCCTCTGAGGACGCTGCACGGGGTGGGACGGATGTTTG
GCGCTGGGCGGTTCCTCTGCAACATGACCAGCGTCTCGTCGTCGCTGCAAATTGAGCTCG
TACCCTGCCTTCAAGATAACTATGCTTACATCCTACATGATGTTGATACTGGAACAGTTG
GAGTTGTGGACCCTTCTGAAGCAACGCCAATCATAAATGCACTAGAAAAAAGAAACCAGA
ACTTGACCTACATACTGAACACCCATCATCACTATGACCATACTGGTGGCAACTTGGAAC
TGAAGGCAAAATATGGTGCAAAGGTGATTGGTTCTGCAAAGGATAGGGATAGAATTCCAG
GCATTGACATAACTCTTAGTGAGGGTGACACATGGATGTTTGCTGGTCATCAAGTTCTTG
TAATGGAAACTCCTGGTCATACATCAGGTCATGTGTGCTACCACTTCCCTGGATCTGGAG
CAATATTTACAGGGGACACATTGTTTAGTTTGTCATGTGGAAAGCTTTTTGAAGGGACTC
CACAACAGATGTACTCTTCACTCCAGAAAATTATAGCACTTCCGGATGAGACAAGAGTGT
ATTGCGGACATGAATATACATTGAGCAATTCAAAGTTTGCCTTGAGCATAGAACCAGGAA
ATAAAGACTTACAGGAATACGCTGCAAATGCCGCTGATCTCCGCAAGAGGAATACACCCA
CGGTGCCAACAACAATTGGGAGAGAGAAGCAGTGCAATCCTTTTCTGAGGACCTCAAGTC
CAGAGATAAAGAATACCCTGTCCATCCCAGACCATTTTGATGATGCACGCGTTCTTGAAG
TTGTTCGACGAGCGAAGGATAACTTTTAACTAACCATAAAAAAGGAAAATTTCACGTCCA
TGACCCAATTGTCATGTTGAGGAGAGAAGCAGACAAAGAACTCCACAAGAGAAACAAAAG
AACTACAAGGTATATGATGACTACATAAGATCGAGCTAGTTTGTTTCTAAAATGCTTCGG
CAAAATTGTGTCGCGGTGTATGTAGCTTTTGGCAGTGGTTGTAAAATGTCGTCCAATAGC
AGCTGGTGATTCTTTCTATCAACTACAAATAAGTGTGATCTGTTATCATCAACTCTGTAA
AAAGAATGCGAGTTAGAGATTGATAGTTCTCCCAGAATCTC