Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0515500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20078193:20082633:1 gene:Os09g0515500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os09t0515500-01)
Sequence	ATGGCGTGGCGGATGCTGCGACGGAAGGATTTTCACACGGGCCTTGTGAATTTGGCCTCC CGTGTGGATCATGGGGGAGCGAAGAATTTTTCCAGTGGGACGTTTGGAAAGCTGGCTGAC TTCGTTCTTAGCGATACTCATACACCCATTGTAAAAGGTGCTGCTAATTGTACGGCTTAT AAACACTGCACTATCAGGAATTTTCATGCAGGTGTATACATGTTAGCATGGAGTAGGAAG CGTGAAGAAGTTGCAGGGTTAAAAGCACCTAAAAAGGAGAAGCGAGTGAAAAGAGAAACT AGAACTCAACCTCCTGTAGAAGCGCCATATGTTGCACCAAAACAAAAGATAGCTATCAAA TCATCACCAGATAAAACAGTTGACATTTTTGATGGGATGACATTGCTTGATCTCTCCAAA CGGACTGGTGCATCAATTGGTGCACTTCAAGACATACTCACAGATCTTGGTGAAAAGGTT GAATCAGAGTTCGACGCTATCAGCATTGATCTTGCTGAGTTAGTTGCTATGGAACTTGGT GTTAATATCAGAAGAATGCACACTGGTGAAGGCACACTTGAACCACGTCCTGCTGTGGTA ACAATCATGGGCCATGTTGACCATGGTAAAACGTCACTTCTAGATTCCCTGCGTCAAACA TCTGTTGCGGCTAAGGAAGCTGGTGGGATTACTCAACATATAGGTGCCTTTGTTGTTGAG ATGCCATCAGGAGCCTCTATCACATTTCTTGATACACCAGGGCATGCTGCCTTTAGTGCA ATGCGGGCTAGAGGTGCTGCTGTCACAGATATTGTAGTGCTTGTAGTTGCAGCTGATGAT GGGGTGATGCCTCAAACACTTGAAGCTATGTCACATGCAAAAGCAGCCAATGTTCCCATT GTAGTTGCTGTAAACAAATGTGATAAATCTGGAGCCGATCCTGAGAGGGTCAGAATTCAG CTGGGTTCAGAAGGATTGCTTTTGGAGGATATGGGTGGTGATGTACAGGTTGTAGAAATT TCTGCAGTAACAAAACTTGGTTTGGACAAATTGGAAGAGGCTTTGCTCCTTCAGGCTGAG ATAATGGACCTGAAAGCTAGAATTGATGGACCTGCCCAAGCTTTTGTGGTGGAGGCAAGA GTAGACAGAGGCAGGGGGCCATTGGCAACAGCTATAGTCAAGGCTGGCACATTAGTCAGC GGGCAGCACATTGTTGTGGGAGCAGAGTGGGGAAGAATTCGGTCTCTTAGAGATACTGCT GGGAAAATAACAGAGTCTGCAAAACCTGCAATGCCTGTTGAGATTGAGGGGTTAAGGGGC CTTCCAATGGCTGGGGATGATGTTGTGGTTGTTGACTCGGAAGAAAGGGCAAGAATGCTT AGTCAAGGACGGAAGAAAAAACAGGAAAAAGACAGGCTTCGAAAGATTGATGAAGACATG ACAGAGGAGGCGGAAATTGGTGAAGAGACTCCTGAAAGAGTTGAGATGCCCATCATTGTG AAAGCTGATGTACAAGGCAGTGTTCAAGCAGTTACAGATGCCTTAAGAAGCCTTAATAGT CCACAGGTGTTTGTGAATATTGTTCATGTTGGTGTTGGCCCAATAAGCCAACATGACATT GATCTGGCACAAGCATGCCGGGCATATATAGTCGGTTTCAACATCCGTACTCCTCCAAGT GCTATCACTCTAGCAGCAACACAAGCCAACATAAAGATTTTGCTGCACAAGGTGATCTAT CATCTCCTTGAAGAAATGGGACGGGAGATTGTCGAGAAGGCACCGGGCACCCCTGAGACC CAGGTTTCAGGGGAAGCCGAGGTTCTGAACATATTCGAGCTGAAAGGGCGTAGCAAGTCA AAAGGGCCTGACATAAAGATTGCCGGCTGCCGAATAACTGACGGGCACTTAAGCAAAACC GGGACGATGAGGCTTTTGAGGAGTGGAGATGTCGTCTTTGAGGGTCCATGCGCATCTCTG AAGCGGGAGAAGCAGGACGCAGAGACGGTCGACAAGGGTAACGACTGTGGATTGGTGATT CAGGACTGTAACGATTTCCAGGTTGGGGACATCGTCCAGTGCTTGGAGCAGGTTATCAGG AAGCCCAAGTTCATCTCAACACAAAGCGGCGCGGTTCGGATAGAATGCTGA

Peptide Sequence

PEP ID	Os09t0515500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20078193:20082633:1 gene:Os09g0515500 transcript:Os09t0515500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os09t0515500-01)
Sequence	MAWRMLRRKDFHTGLVNLASRVDHGGAKNFSSGTFGKLADFVLSDTHTPIVKGAANCTAY KHCTIRNFHAGVYMLAWSRKREEVAGLKAPKKEKRVKRETRTQPPVEAPYVAPKQKIAIK SSPDKTVDIFDGMTLLDLSKRTGASIGALQDILTDLGEKVESEFDAISIDLAELVAMELG VNIRRMHTGEGTLEPRPAVVTIMGHVDHGKTSLLDSLRQTSVAAKEAGGITQHIGAFVVE MPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPI VVAVNKCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVTKLGLDKLEEALLLQAE IMDLKARIDGPAQAFVVEARVDRGRGPLATAIVKAGTLVSGQHIVVGAEWGRIRSLRDTA GKITESAKPAMPVEIEGLRGLPMAGDDVVVVDSEERARMLSQGRKKKQEKDRLRKIDEDM TEEAEIGEETPERVEMPIIVKADVQGSVQAVTDALRSLNSPQVFVNIVHVGVGPISQHDI DLAQACRAYIVGFNIRTPPSAITLAATQANIKILLHKVIYHLLEEMGREIVEKAPGTPET QVSGEAEVLNIFELKGRSKSKGPDIKIAGCRITDGHLSKTGTMRLLRSGDVVFEGPCASL KREKQDAETVDKGNDCGLVIQDCNDFQVGDIVQCLEQVIRKPKFISTQSGAVRIEC

Transcript Sequence

Transcript ID	Os09t0515500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20078193:20082633:1 gene:Os09g0515500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os09t0515500-01)
Sequence	GATCTCCTCCGAACCCTCTGCATCCCCCTAAACCTTTCTCCGCTCCTCCCCGCCGTCGCC GCCGCCAGCAACCCTAGCCCTCCTCCGCCGTCGCCGGTGATAACCTCTCCCATCGCCGTA CGTCCCCAGGATCCCTTCCCATCCTCCTCCCTTATCCCGTCTCTTTAGTCTCGCCGTGGG GGGCAGGGTGGAAGAGCCGCCGCCGGCGGAGCGCCGAGAATGGCGTGGCGGATGCTGCGA CGGAAGGATTTTCACACGGGCCTTGTGAATTTGGCCTCCCGTGTGGATCATGGGGGAGCG AAGAATTTTTCCAGTGGGACGTTTGGAAAGCTGGCTGACTTCGTTCTTAGCGATACTCAT ACACCCATTGTAAAAGGTGCTGCTAATTGTACGGCTTATAAACACTGCACTATCAGGAAT TTTCATGCAGGTGTATACATGTTAGCATGGAGTAGGAAGCGTGAAGAAGTTGCAGGGTTA AAAGCACCTAAAAAGGAGAAGCGAGTGAAAAGAGAAACTAGAACTCAACCTCCTGTAGAA GCGCCATATGTTGCACCAAAACAAAAGATAGCTATCAAATCATCACCAGATAAAACAGTT GACATTTTTGATGGGATGACATTGCTTGATCTCTCCAAACGGACTGGTGCATCAATTGGT GCACTTCAAGACATACTCACAGATCTTGGTGAAAAGGTTGAATCAGAGTTCGACGCTATC AGCATTGATCTTGCTGAGTTAGTTGCTATGGAACTTGGTGTTAATATCAGAAGAATGCAC ACTGGTGAAGGCACACTTGAACCACGTCCTGCTGTGGTAACAATCATGGGCCATGTTGAC CATGGTAAAACGTCACTTCTAGATTCCCTGCGTCAAACATCTGTTGCGGCTAAGGAAGCT GGTGGGATTACTCAACATATAGGTGCCTTTGTTGTTGAGATGCCATCAGGAGCCTCTATC ACATTTCTTGATACACCAGGGCATGCTGCCTTTAGTGCAATGCGGGCTAGAGGTGCTGCT GTCACAGATATTGTAGTGCTTGTAGTTGCAGCTGATGATGGGGTGATGCCTCAAACACTT GAAGCTATGTCACATGCAAAAGCAGCCAATGTTCCCATTGTAGTTGCTGTAAACAAATGT GATAAATCTGGAGCCGATCCTGAGAGGGTCAGAATTCAGCTGGGTTCAGAAGGATTGCTT TTGGAGGATATGGGTGGTGATGTACAGGTTGTAGAAATTTCTGCAGTAACAAAACTTGGT TTGGACAAATTGGAAGAGGCTTTGCTCCTTCAGGCTGAGATAATGGACCTGAAAGCTAGA ATTGATGGACCTGCCCAAGCTTTTGTGGTGGAGGCAAGAGTAGACAGAGGCAGGGGGCCA TTGGCAACAGCTATAGTCAAGGCTGGCACATTAGTCAGCGGGCAGCACATTGTTGTGGGA GCAGAGTGGGGAAGAATTCGGTCTCTTAGAGATACTGCTGGGAAAATAACAGAGTCTGCA AAACCTGCAATGCCTGTTGAGATTGAGGGGTTAAGGGGCCTTCCAATGGCTGGGGATGAT GTTGTGGTTGTTGACTCGGAAGAAAGGGCAAGAATGCTTAGTCAAGGACGGAAGAAAAAA CAGGAAAAAGACAGGCTTCGAAAGATTGATGAAGACATGACAGAGGAGGCGGAAATTGGT GAAGAGACTCCTGAAAGAGTTGAGATGCCCATCATTGTGAAAGCTGATGTACAAGGCAGT GTTCAAGCAGTTACAGATGCCTTAAGAAGCCTTAATAGTCCACAGGTGTTTGTGAATATT GTTCATGTTGGTGTTGGCCCAATAAGCCAACATGACATTGATCTGGCACAAGCATGCCGG GCATATATAGTCGGTTTCAACATCCGTACTCCTCCAAGTGCTATCACTCTAGCAGCAACA CAAGCCAACATAAAGATTTTGCTGCACAAGGTGATCTATCATCTCCTTGAAGAAATGGGA CGGGAGATTGTCGAGAAGGCACCGGGCACCCCTGAGACCCAGGTTTCAGGGGAAGCCGAG GTTCTGAACATATTCGAGCTGAAAGGGCGTAGCAAGTCAAAAGGGCCTGACATAAAGATT GCCGGCTGCCGAATAACTGACGGGCACTTAAGCAAAACCGGGACGATGAGGCTTTTGAGG AGTGGAGATGTCGTCTTTGAGGGTCCATGCGCATCTCTGAAGCGGGAGAAGCAGGACGCA GAGACGGTCGACAAGGGTAACGACTGTGGATTGGTGATTCAGGACTGTAACGATTTCCAG GTTGGGGACATCGTCCAGTGCTTGGAGCAGGTTATCAGGAAGCCCAAGTTCATCTCAACA CAAAGCGGCGCGGTTCGGATAGAATGCTGATAGATGTTTAGTTGTTTTCTGCTTCCATTC GTGATCAACTAACCAAGATTTTGGCAGTGGAACAAGAGGGAGATGATCAAGTTGGTGCGC TTATTATTTTCTCGCCAACAAACTTGTTGCTGCAACCAATTTCAAACAGAAACCTCTATT CATATATGAGATGAAGACATGGTTAATCTTGTTCAGGTGCTTGTGTTTGTTGTACATTCC TGCAGTTTCCACAAGTTCTGCGAATAACGTGGATTACTGGATTAGTGAAAAGGTTATTGT TATTGACTTAATTATTATTACTGTATAATTGCAGCCACAGAAAGGCCATTTTTGCCGGTT CATGCGAGTCCAGGCTCTGTTG