Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0515100-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:20059613:20066583:1 gene:Os09g0515100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bromodomain protein 103. (Os09t0515100-01);Similar to Cdc48 cell division control protein 48, AAA family. (Os09t0515100-02)
Sequence	ATGGTGGGGATGGAAGGGAAGGGGGATGCATCGGTGACACCAGTGAGGACTAGTGACCGG CTGCGTAAGCGGCCCAAGTACTTCGGTCGCAATTATATGTACTACAATCCAGCCATACGC AAGAAGATGAAGTCTAAGAAGAGAGCGGCTGCATCACAGATTGCCAAGAAGCTGCTTCGC AAGTCAGCTGCCAGGGCACCGCCTGCTGATTCTATTGCAGCAAATCTACGTCGTTCAACA CGAAAGCGAAGAATGTCTGTAAATCTGGAGGACTATGACACCGATAGTTCTAGTATGGAA GATGATGATCTTATGAGGCCCAGATATCGATCTTCAAAGAATAAAGTGGATGACGAAGTG TCAGCTAGGCCAAAGCGCAAGAAGCTGTCCAACTCTAGCTCCATTCCTCGCCGTGAGGGT TTACGGCCTAGAAGATCTATCCGAGGACAAAGACTTCATCCATACCAAGAATCTGAGGAT GACCAGGAAAGCTCTGAAGAACAGCCTGCACAAGATAGGAGGGAAAATGGTAATGATATC GAAGAGGATGGCAATGAGGAGGAAGTTGATGGAGGTGATGAAGCTGAAGCGGATGGAGAT GATGAAGATGGTGAGGAAGAACAAGAAGGGAGGAGGAGATATGATCTCAGGGATCGTTCA GAAGTTCGTAGACCCTCCCCACGGAAGGAAGGGAAGCACAGAACACAATCACCCCGTAGA GTACTAGTACATGGAATTGGTCCAAAGAACAGCAAATATTTGAAAAAGGGTGGTTCACGC ATGCATAAGCGCCCTCGATTCTCATTGCCAGATGATTCAGATGATTCTCTTCTTGTGGAT GAGCCAGATGAAGGTCCATCCATGCCATGGATGCGTGGTGGGAGAGGAGGTATGCCGTGG TTTTTAGGTGGATTGGATATGCATTGTCCAGGAGCATGGGGTCTGAATGTTGGAGCATCC GGTTGGGGTCATCAGGGTGACAACACAGTGAGTACTTCTTCACTTATGCCAGGGATCCAA ACTGCTGGACCAAGTTCCAAGGGAGGAGCTGATATTCAGCCTCTCCAGGTTGACGGGAGT GTGAGTTTTAATGATATAGGGGGGCTGTCCGATTACATTGATGCATTGAAGGAAATGGTT TTCTTCCCTTTGCTTTATCCAGATTTTTTTGCAAACTATCACATTACTCCTCCTAGGGGT GTTCTTCTCTGTGGCCCTCCTGGTACAGGGAAGACATTGATTGCTCGTGCCTTAGCGTGT GCTGCCTCTAAAGCTGGTCAGAAGGTTAGCTTTTATATGAGAAAAGGAGCTGATGTTCTT AGTAAGTGGGTTGGAGAGGCTGAAAGGCAGCTCAAGCTACTGTTTGAGGAAGCTCAGAAG AATCAGCCATCAATCATATTTTTTGACGAAATAGATGGTTTGGCACCTGTGAGGTCTAGC AAGCAAGAGCAGATTCACAATTCAATTGTTTCTACATTGCTTGCTTTGATGGATGGTCTG GATTCACGTGGACAAGTTGTTTTGATTGGAGCAACAAACCGAATTGATGCCATTGATGGA GCATTGCGTAGGCCTGGCCGATTTGATCGTGAGTTCTTTTTTCCTCTACCTGGTTATGAG GCAAGGGCTGAAATACTGGACATTCATACACGGAAATGGAAGGACCCTCCACCAAAGGAA TTAAAGACGGAGCTTGCTGCAAGCTGTGTGGGGTATTGTGGAGCTGATTTGAAAGCCTTA TGTACAGAAGCTGCTATTCGAGCATTTAGGGAGAAGTATCCTCAGGTCTACACGAGTGAC GATAAGTTTGTCATTGATGTTGATTCAGTCAGGGTTGAGAAGTACCACTTCTTGGAAGCT ATGTCTACAATAACTCCAGCTGCACATAGGGGGTCGATTGTGCATTCAAGGCCGCTGTCA CCAGTTATCGCTCCTTGTCTAAAAAGGCATCATGAAAAAATAATGGAAAGAATTGCTGAT ATTTTCCCTTTCCTATCATCAGTAGATGTTAGCAAGTTCTCTGCCCTTTCCTATGGATCA TCCATCCCTCTTGTTTATAGACCTCGACTTTTGATGTGCGGTGGTGTGAGTGTTGGACTG GATCATGTTGGGCCAGCTGTTTTGCACGAACTTGAGAAATTTTCTGTTCACTCCTTGGGG TTGCCGTCTCTTCTGTCTGATCCAAGTGCAAAGACACCTGAAGAAGCTCTTGTGCACATT TTTGGGGAAGCTAGGAGAACAACCCCGTCAATACTGTACTTGCCTCAGTTTCATCTTTGG TGGGATACGGCACATGAACAGCTTAGGGCTGTGCTATTGACTTTGTTGAATGAGCTGCCA TCCAACCTTCCAGTTTTGTTGCTAGGAACCTCGTCAGTGGCCTTTGGTGACCTTGAAGAA GAGTGTGCTTCCATATTTTCTTCTCGTAATGTATATGAAGTGGATCAACCAAGTGATGAT GATAGAATGAGATACCTGCATGCACTGTTTGAGTCATTGCTCTCATTTCAAATGGAAGAG TCTAGGAGTAAGTCTAAAGACCAGAAGTCTTCTGTTGATCTTCCCAAAGCACCAAAGGAA GTGGATGGTCCCAAACTTTCAGAGCTAAAAGCGAAGGCAGAAGCCGAACAACATGCTGTT CGACGGATGAGAATGTGTCTTCGAGATATTTGTAACCGCATTCTGTACAACAAAAGGTTC AATGTGTTTCACTTCCCAGTATCCGAAGAGGAGGTACCTGACTATAGATCTGTAGTTCAC AATCCTATGGATATGGCTACTGTCTTACAGCAGGTGGACTCTGGGCAGTACCTTACTCGG GCCTCATTTATGAAGGACATTGATCTTATAGTCTCAAATGCAAAGACATATAATGGGAGT GACTACAATGGATCTCGTATTGTCAGTAGAGCATGTGAACTACGAGATGTGGTGCAAGGA ATGTTGTCACAGATGGACCCATCTTTGGTGTCCTTTTGTGATAAAATTGCTGAACAGGGG GGACCACTACAGGTTACGGATGATGGAGATAGCTCTATTCTTCAAGCAGCGCCTGTTGCT CAGCTGGTATCTGGTACTAGGATGAGCGCAAGGCTTCGTAATGTACAACCAGAAGTAAAT CTATCACGAAGTTATGAGGCGTTGAAGCGGCAAAAGAAAAGCACCGAAACTGAACAAGGC ATGGTTAAAGAATCGACAACAAGAGATGACAAGTCTCTTGGTGATGTTGATTTGTCAAAG CCAATCTCCCCAGAAGAAGCTCCAAAAGAACCAGATTCAAATGGTGTTCTGAAAGAAACT GACAATCCACCAACTGAATTACCAGAATTACCGGAACTAAATCCTGAACCCATGGTGACT GACAACGGTGAAAACGCGGCCATGCCTGCTAGCGACGACATACCTGAACAACTGGAAGTC GTGAAGCGACGCTTCATGGAACTCACCACAGGCTATGGCGTGCCACAGCTCGAAAGGCTT TGCACCCGGGTAATGAAAGGCATGATAGAATTGAGCGGTAAAGAAAGCAACGAGGATCAT AGGCGGTTAGTCGTTAGGTATTTGTTGACATTTGTTGAGAACAGCGACAATTTTTAA

Peptide Sequence

PEP ID	Os09t0515100-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:20059613:20066583:1 gene:Os09g0515100 transcript:Os09t0515100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bromodomain protein 103. (Os09t0515100-01);Similar to Cdc48 cell division control protein 48, AAA family. (Os09t0515100-02)
Sequence	MVGMEGKGDASVTPVRTSDRLRKRPKYFGRNYMYYNPAIRKKMKSKKRAAASQIAKKLLR KSAARAPPADSIAANLRRSTRKRRMSVNLEDYDTDSSSMEDDDLMRPRYRSSKNKVDDEV SARPKRKKLSNSSSIPRREGLRPRRSIRGQRLHPYQESEDDQESSEEQPAQDRRENGNDI EEDGNEEEVDGGDEAEADGDDEDGEEEQEGRRRYDLRDRSEVRRPSPRKEGKHRTQSPRR VLVHGIGPKNSKYLKKGGSRMHKRPRFSLPDDSDDSLLVDEPDEGPSMPWMRGGRGGMPW FLGGLDMHCPGAWGLNVGASGWGHQGDNTVSTSSLMPGIQTAGPSSKGGADIQPLQVDGS VSFNDIGGLSDYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALAC AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSS KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFFFPLPGYE ARAEILDIHTRKWKDPPPKELKTELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD DKFVIDVDSVRVEKYHFLEAMSTITPAAHRGSIVHSRPLSPVIAPCLKRHHEKIMERIAD IFPFLSSVDVSKFSALSYGSSIPLVYRPRLLMCGGVSVGLDHVGPAVLHELEKFSVHSLG LPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFHLWWDTAHEQLRAVLLTLLNELP SNLPVLLLGTSSVAFGDLEEECASIFSSRNVYEVDQPSDDDRMRYLHALFESLLSFQMEE SRSKSKDQKSSVDLPKAPKEVDGPKLSELKAKAEAEQHAVRRMRMCLRDICNRILYNKRF NVFHFPVSEEEVPDYRSVVHNPMDMATVLQQVDSGQYLTRASFMKDIDLIVSNAKTYNGS DYNGSRIVSRACELRDVVQGMLSQMDPSLVSFCDKIAEQGGPLQVTDDGDSSILQAAPVA QLVSGTRMSARLRNVQPEVNLSRSYEALKRQKKSTETEQGMVKESTTRDDKSLGDVDLSK PISPEEAPKEPDSNGVLKETDNPPTELPELPELNPEPMVTDNGENAAMPASDDIPEQLEV VKRRFMELTTGYGVPQLERLCTRVMKGMIELSGKESNEDHRRLVVRYLLTFVENSDNF

Transcript Sequence

Transcript ID	Os09t0515100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20059613:20066583:1 gene:Os09g0515100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to bromodomain protein 103. (Os09t0515100-01);Similar to Cdc48 cell division control protein 48, AAA family. (Os09t0515100-02)
Sequence	CTCTCTCTCTCTCTCGCCTCCGCTTCGAAACCCCCGACGCGAAGGAAGCGAGACGAAACC CTCGCGCGAGCCGCCTCCGCCACCGCCGCCTCCTTCCGACCAGCCGCCGCCGCCGCCGCC GCGTCGCCGAATCCGGGCGGGGGCTAGGCGCGGGCTCCCCGCTCCCCGCCGATCGAATCC TTCGAGGGAGCAATGGCCGGCGTGGTGTGGATGAGGACGTGAGGTGGGAGCGATGGTGGG GATGGAAGGGAAGGGGGATGCATCGGTGACACCAGTGAGGACTAGTGACCGGCTGCGTAA GCGGCCCAAGTACTTCGGTCGCAATTATATGTACTACAATCCAGCCATACGCAAGAAGAT GAAGTCTAAGAAGAGAGCGGCTGCATCACAGATTGCCAAGAAGCTGCTTCGCAAGTCAGC TGCCAGGGCACCGCCTGCTGATTCTATTGCAGCAAATCTACGTCGTTCAACACGAAAGCG AAGAATGTCTGTAAATCTGGAGGACTATGACACCGATAGTTCTAGTATGGAAGATGATGA TCTTATGAGGCCCAGATATCGATCTTCAAAGAATAAAGTGGATGACGAAGTGTCAGCTAG GCCAAAGCGCAAGAAGCTGTCCAACTCTAGCTCCATTCCTCGCCGTGAGGGTTTACGGCC TAGAAGATCTATCCGAGGACAAAGACTTCATCCATACCAAGAATCTGAGGATGACCAGGA AAGCTCTGAAGAACAGCCTGCACAAGATAGGAGGGAAAATGGTAATGATATCGAAGAGGA TGGCAATGAGGAGGAAGTTGATGGAGGTGATGAAGCTGAAGCGGATGGAGATGATGAAGA TGGTGAGGAAGAACAAGAAGGGAGGAGGAGATATGATCTCAGGGATCGTTCAGAAGTTCG TAGACCCTCCCCACGGAAGGAAGGGAAGCACAGAACACAATCACCCCGTAGAGTACTAGT ACATGGAATTGGTCCAAAGAACAGCAAATATTTGAAAAAGGGTGGTTCACGCATGCATAA GCGCCCTCGATTCTCATTGCCAGATGATTCAGATGATTCTCTTCTTGTGGATGAGCCAGA TGAAGGTCCATCCATGCCATGGATGCGTGGTGGGAGAGGAGGTATGCCGTGGTTTTTAGG TGGATTGGATATGCATTGTCCAGGAGCATGGGGTCTGAATGTTGGAGCATCCGGTTGGGG TCATCAGGGTGACAACACAGTGAGTACTTCTTCACTTATGCCAGGGATCCAAACTGCTGG ACCAAGTTCCAAGGGAGGAGCTGATATTCAGCCTCTCCAGGTTGACGGGAGTGTGAGTTT TAATGATATAGGGGGGCTGTCCGATTACATTGATGCATTGAAGGAAATGGTTTTCTTCCC TTTGCTTTATCCAGATTTTTTTGCAAACTATCACATTACTCCTCCTAGGGGTGTTCTTCT CTGTGGCCCTCCTGGTACAGGGAAGACATTGATTGCTCGTGCCTTAGCGTGTGCTGCCTC TAAAGCTGGTCAGAAGGTTAGCTTTTATATGAGAAAAGGAGCTGATGTTCTTAGTAAGTG GGTTGGAGAGGCTGAAAGGCAGCTCAAGCTACTGTTTGAGGAAGCTCAGAAGAATCAGCC ATCAATCATATTTTTTGACGAAATAGATGGTTTGGCACCTGTGAGGTCTAGCAAGCAAGA GCAGATTCACAATTCAATTGTTTCTACATTGCTTGCTTTGATGGATGGTCTGGATTCACG TGGACAAGTTGTTTTGATTGGAGCAACAAACCGAATTGATGCCATTGATGGAGCATTGCG TAGGCCTGGCCGATTTGATCGTGAGTTCTTTTTTCCTCTACCTGGTTATGAGGCAAGGGC TGAAATACTGGACATTCATACACGGAAATGGAAGGACCCTCCACCAAAGGAATTAAAGAC GGAGCTTGCTGCAAGCTGTGTGGGGTATTGTGGAGCTGATTTGAAAGCCTTATGTACAGA AGCTGCTATTCGAGCATTTAGGGAGAAGTATCCTCAGGTCTACACGAGTGACGATAAGTT TGTCATTGATGTTGATTCAGTCAGGGTTGAGAAGTACCACTTCTTGGAAGCTATGTCTAC AATAACTCCAGCTGCACATAGGGGGTCGATTGTGCATTCAAGGCCGCTGTCACCAGTTAT CGCTCCTTGTCTAAAAAGGCATCATGAAAAAATAATGGAAAGAATTGCTGATATTTTCCC TTTCCTATCATCAGTAGATGTTAGCAAGTTCTCTGCCCTTTCCTATGGATCATCCATCCC TCTTGTTTATAGACCTCGACTTTTGATGTGCGGTGGTGTGAGTGTTGGACTGGATCATGT TGGGCCAGCTGTTTTGCACGAACTTGAGAAATTTTCTGTTCACTCCTTGGGGTTGCCGTC TCTTCTGTCTGATCCAAGTGCAAAGACACCTGAAGAAGCTCTTGTGCACATTTTTGGGGA AGCTAGGAGAACAACCCCGTCAATACTGTACTTGCCTCAGTTTCATCTTTGGTGGGATAC GGCACATGAACAGCTTAGGGCTGTGCTATTGACTTTGTTGAATGAGCTGCCATCCAACCT TCCAGTTTTGTTGCTAGGAACCTCGTCAGTGGCCTTTGGTGACCTTGAAGAAGAGTGTGC TTCCATATTTTCTTCTCGTAATGTATATGAAGTGGATCAACCAAGTGATGATGATAGAAT GAGATACCTGCATGCACTGTTTGAGTCATTGCTCTCATTTCAAATGGAAGAGTCTAGGAG TAAGTCTAAAGACCAGAAGTCTTCTGTTGATCTTCCCAAAGCACCAAAGGAAGTGGATGG TCCCAAACTTTCAGAGCTAAAAGCGAAGGCAGAAGCCGAACAACATGCTGTTCGACGGAT GAGAATGTGTCTTCGAGATATTTGTAACCGCATTCTGTACAACAAAAGGTTCAATGTGTT TCACTTCCCAGTATCCGAAGAGGAGGTACCTGACTATAGATCTGTAGTTCACAATCCTAT GGATATGGCTACTGTCTTACAGCAGGTGGACTCTGGGCAGTACCTTACTCGGGCCTCATT TATGAAGGACATTGATCTTATAGTCTCAAATGCAAAGACATATAATGGGAGTGACTACAA TGGATCTCGTATTGTCAGTAGAGCATGTGAACTACGAGATGTGGTGCAAGGAATGTTGTC ACAGATGGACCCATCTTTGGTGTCCTTTTGTGATAAAATTGCTGAACAGGGGGGACCACT ACAGGTTACGGATGATGGAGATAGCTCTATTCTTCAAGCAGCGCCTGTTGCTCAGCTGGT ATCTGGTACTAGGATGAGCGCAAGGCTTCGTAATGTACAACCAGAAGTAAATCTATCACG AAGTTATGAGGCGTTGAAGCGGCAAAAGAAAAGCACCGAAACTGAACAAGGCATGGTTAA AGAATCGACAACAAGAGATGACAAGTCTCTTGGTGATGTTGATTTGTCAAAGCCAATCTC CCCAGAAGAAGCTCCAAAAGAACCAGATTCAAATGGTGTTCTGAAAGAAACTGACAATCC ACCAACTGAATTACCAGAATTACCGGAACTAAATCCTGAACCCATGGTGACTGACAACGG TGAAAACGCGGCCATGCCTGCTAGCGACGACATACCTGAACAACTGGAAGTCGTGAAGCG ACGCTTCATGGAACTCACCACAGGCTATGGCGTGCCACAGCTCGAAAGGCTTTGCACCCG GGTAATGAAAGGCATGATAGAATTGAGCGGTAAAGAAAGCAACGAGGATCATAGGCGGTT AGTCGTTAGGTATTTGTTGACATTTGTTGAGAACAGCGACAATTTTTAACTCGGAACGGT AATAAGATATTAAGATTCTTGTTCCCCAATGTACATTCTCTTTGCCACAAAGAATAGTAG TGGAACGCCCCCTATGAGAGTCACCACCCTGCTTCCATGATGTAAGAAAGTAACAAACTA CCAGATGCTCAGTGTGTCAGTGACACAGTTTTGCCATGGATGTTTGTAGCCAGCCTTGTA GATTAAATCCTGATCAATTTCAGCATCTTGTAATGTGATGGATGATGTACCTCTCTTTGC ACAAATATATTAGCAAGGTTTCTC