Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0514900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:20053869:20057671:1 gene:Os09g0514900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix, Nulp1-type domain containing protein. (Os09t0514900-01)
Sequence	ATGTCCGCCAGGCTGCTCCGGCGAGTGCTCCAGGAGCGGGAGACCGCCCCGCAGGACCCT GCCGCCGCCGCCGCCGCCGCAGAGGTCGAGCGGGAGGAGGAGGAGGAGGCCTCCCCTCCC CGTGTCGCCGCCAGGAACCCCTTCGATCTCCTCGACGAAGAGGAGGAGGAAGAGGAGGAG AAGGAAGATGAAGTGTATTCTGAGCAACCTGTGAGTTACAACGAACAGAAACATTCTGTG AACAAGAAGCCTGGCAATGCTGTTCCTGAAACAAACAAGAAATCAAAGAAAAAGAAGAAA AAGAGCAAGGCAGACAAACAAGTGTCAACAAAGTCAAGGGATGAAAAGTCACTGGATTCA ATTCTGGAAGATTTATCTATTGAAAAGAAGCCCATGCAGCAAAGAGTTAATCAAAATGAA AGAGCATCTGGGAAGGAGATTGAGATAGATGAAACCACTCCTGGGACATCATCTATTCTC TCAATTGATCCCAAACATCTAAAAGCTGAAAATGAGATGAGGCGCATTTTTGGATCAAAA GTAGTGGATTCACTTGAAAATCAACGGAATGTGCCTAGCAGTTCAACATCAAGGCTACGA GGTGTTAGGCGCGTTGCCCACAATCCAAGAAAAACCCTTCTTGTTACTCCATCTAGCTAC TGGCCACCATGGGATAAATCAATGTCAATGGATATTGTGGAGACAAAGAGTGGTTTCAAC TATTTCAGGTACATATATGATCCTTCTGTCAGTCATGTGCAAGACTTGTTTGAAGTTGCC AAATCTGCAAATGATCTCAATGCTATTGCAGCTATATTAGCAAAGTACCCTTATCACCCA GAATCATTGTTAACATTTGCTGAACTTTTCAAATATTCTGGAGAACATCAATCGTCAGCA GATGCTGTTGAGAAGTGTCTATTTGCTCTGGAGTGTGCTTGGCATCCATTGTTTAGCCCA CTGCACAGCAACTGCCAGCTGAAATATAGCCATGACACAAACAAGCCATTCTTTACTGCG CTTTTTAGTCACATGAAAAATTTGGATAGACGTGGCTGCCATCGGTCTGCTTTAGAGGTC TGCAAATTCCTTCTTTCATTGGATTCTGATGATCCAAAGGGTGCTCTATTCTGCATTGAT TACTTTGCTCTAAGATCACAACAGTACAAATGGTTGGAACAGTTTGCAGAAGAGTACCAG TGTGATAACTCCTTGTGGTTATTCCCTAATTTCTCATTTTCCCTTGCCATTGCACGGTTC TACGTTGAGCGTGATGCAACAAATGGGGAGGCTTCTGACCATTCTGACAAGTCAACATCT GTAGATCTCATGAAGCAAGCATTGATGCTTCATCCTTTGGTGCTGCGCAAGATTGTTGAC AAGGCTCCTTTGAAAGACTCCTCGTGGACCCAAATACTCAGGAATGTGTTCTTTGGATCA GCAAAGCCAGGAAGCCCTTCCCTTGAGCATATGATTAGCATATATGTTGAACGCCATTAC ATCATGTGGAGGTTCCCAGAACTGCAGAATTTACTCAAAGATGCTGCTCTTTTGGTGATT GAATCACTAAAACAGGATAACAGAGAGGCCCAGGACTGGGCATGTGTTAGAAAAGAAGCA TTCTCTTCAGATAAGAATGAGTACTCTCATCTTCTTGTTTCAGACTTCTCCGACACAACA CCATCACTCCCCCCTGAAGAATTGCGGCCATTCATGGTTGCTCCTGGAATGGCACATGAG ATGCCGCCAGCTGAACAAGAACTGGGGATTGAGGTCAGACCCCGTGCCCCCCGTGAAGTT GCAGGGCGCAATCCTGCGTTGGTTTTCCTGGAATCACTGCTCCCGTGGGTTGACTATGGT GACAATCATCATGACGAAAATGACCAAAACAATGATGACTGA

Peptide Sequence

PEP ID	Os09t0514900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:20053869:20057671:1 gene:Os09g0514900 transcript:Os09t0514900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix, Nulp1-type domain containing protein. (Os09t0514900-01)
Sequence	MSARLLRRVLQERETAPQDPAAAAAAAEVEREEEEEASPPRVAARNPFDLLDEEEEEEEE KEDEVYSEQPVSYNEQKHSVNKKPGNAVPETNKKSKKKKKKSKADKQVSTKSRDEKSLDS ILEDLSIEKKPMQQRVNQNERASGKEIEIDETTPGTSSILSIDPKHLKAENEMRRIFGSK VVDSLENQRNVPSSSTSRLRGVRRVAHNPRKTLLVTPSSYWPPWDKSMSMDIVETKSGFN YFRYIYDPSVSHVQDLFEVAKSANDLNAIAAILAKYPYHPESLLTFAELFKYSGEHQSSA DAVEKCLFALECAWHPLFSPLHSNCQLKYSHDTNKPFFTALFSHMKNLDRRGCHRSALEV CKFLLSLDSDDPKGALFCIDYFALRSQQYKWLEQFAEEYQCDNSLWLFPNFSFSLAIARF YVERDATNGEASDHSDKSTSVDLMKQALMLHPLVLRKIVDKAPLKDSSWTQILRNVFFGS AKPGSPSLEHMISIYVERHYIMWRFPELQNLLKDAALLVIESLKQDNREAQDWACVRKEA FSSDKNEYSHLLVSDFSDTTPSLPPEELRPFMVAPGMAHEMPPAEQELGIEVRPRAPREV AGRNPALVFLESLLPWVDYGDNHHDENDQNNDD

Transcript Sequence

Transcript ID	Os09t0514900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:20053869:20057671:1 gene:Os09g0514900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Basic helix-loop-helix, Nulp1-type domain containing protein. (Os09t0514900-01)
Sequence	GCAGCCCGCATCCCATCCCATCGCATCGCGTCGCACCGCACCGCACCGCAACCCGCCCAA ACCCTAACCCTCGCGCCATCTCGTCCTCGCCGGCGTGCTCCGCCGCCGCCGCCATGTCCG CCAGGCTGCTCCGGCGAGTGCTCCAGGAGCGGGAGACCGCCCCGCAGGACCCTGCCGCCG CCGCCGCCGCCGCAGAGGTCGAGCGGGAGGAGGAGGAGGAGGCCTCCCCTCCCCGTGTCG CCGCCAGGAACCCCTTCGATCTCCTCGACGAAGAGGAGGAGGAAGAGGAGGAGAAGGAAG ATGAAGTGTATTCTGAGCAACCTGTGAGTTACAACGAACAGAAACATTCTGTGAACAAGA AGCCTGGCAATGCTGTTCCTGAAACAAACAAGAAATCAAAGAAAAAGAAGAAAAAGAGCA AGGCAGACAAACAAGTGTCAACAAAGTCAAGGGATGAAAAGTCACTGGATTCAATTCTGG AAGATTTATCTATTGAAAAGAAGCCCATGCAGCAAAGAGTTAATCAAAATGAAAGAGCAT CTGGGAAGGAGATTGAGATAGATGAAACCACTCCTGGGACATCATCTATTCTCTCAATTG ATCCCAAACATCTAAAAGCTGAAAATGAGATGAGGCGCATTTTTGGATCAAAAGTAGTGG ATTCACTTGAAAATCAACGGAATGTGCCTAGCAGTTCAACATCAAGGCTACGAGGTGTTA GGCGCGTTGCCCACAATCCAAGAAAAACCCTTCTTGTTACTCCATCTAGCTACTGGCCAC CATGGGATAAATCAATGTCAATGGATATTGTGGAGACAAAGAGTGGTTTCAACTATTTCA GGTACATATATGATCCTTCTGTCAGTCATGTGCAAGACTTGTTTGAAGTTGCCAAATCTG CAAATGATCTCAATGCTATTGCAGCTATATTAGCAAAGTACCCTTATCACCCAGAATCAT TGTTAACATTTGCTGAACTTTTCAAATATTCTGGAGAACATCAATCGTCAGCAGATGCTG TTGAGAAGTGTCTATTTGCTCTGGAGTGTGCTTGGCATCCATTGTTTAGCCCACTGCACA GCAACTGCCAGCTGAAATATAGCCATGACACAAACAAGCCATTCTTTACTGCGCTTTTTA GTCACATGAAAAATTTGGATAGACGTGGCTGCCATCGGTCTGCTTTAGAGGTCTGCAAAT TCCTTCTTTCATTGGATTCTGATGATCCAAAGGGTGCTCTATTCTGCATTGATTACTTTG CTCTAAGATCACAACAGTACAAATGGTTGGAACAGTTTGCAGAAGAGTACCAGTGTGATA ACTCCTTGTGGTTATTCCCTAATTTCTCATTTTCCCTTGCCATTGCACGGTTCTACGTTG AGCGTGATGCAACAAATGGGGAGGCTTCTGACCATTCTGACAAGTCAACATCTGTAGATC TCATGAAGCAAGCATTGATGCTTCATCCTTTGGTGCTGCGCAAGATTGTTGACAAGGCTC CTTTGAAAGACTCCTCGTGGACCCAAATACTCAGGAATGTGTTCTTTGGATCAGCAAAGC CAGGAAGCCCTTCCCTTGAGCATATGATTAGCATATATGTTGAACGCCATTACATCATGT GGAGGTTCCCAGAACTGCAGAATTTACTCAAAGATGCTGCTCTTTTGGTGATTGAATCAC TAAAACAGGATAACAGAGAGGCCCAGGACTGGGCATGTGTTAGAAAAGAAGCATTCTCTT CAGATAAGAATGAGTACTCTCATCTTCTTGTTTCAGACTTCTCCGACACAACACCATCAC TCCCCCCTGAAGAATTGCGGCCATTCATGGTTGCTCCTGGAATGGCACATGAGATGCCGC CAGCTGAACAAGAACTGGGGATTGAGGTCAGACCCCGTGCCCCCCGTGAAGTTGCAGGGC GCAATCCTGCGTTGGTTTTCCTGGAATCACTGCTCCCGTGGGTTGACTATGGTGACAATC ATCATGACGAAAATGACCAAAACAATGATGACTGATTCAACCCAAAGCACCAAGTGGCAT GGATGCCTAGTTAGCAGAACAAGACTTAAATTGCACCCATGTGCTTTCCTGTCTCTATGA TGATTAACACAAATTGCTGTCAATCATTGTATCACCTTCACACTCTCAAGCAACAATCAT CAGAAACTAGTGCTCTAGTACTTTTCATGGTTTCGGCATACATGTATAGCTGATCCACCA AAATCTAAATCGCTGAAATATTAAGTCAATTTTGGGCCTGGAAACATGAGAGATCAATGT GTCAATTTCTGC