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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0514600-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:20039648:20040374:-1 gene:Os09g0514600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-grasp fold, ferredoxin-type domain containing protein. (Os09t0514600-00)
Sequence

ATGGCGATCGCGGCGCGCGCCCTGCGCCGCATCCCCCTCCACCTCGCCCCCTCCCTCTCG
CGGGCCTTCTGCGCGCTCTCGCCGGCCGCCCCCGCCCCGGCCGCTGCCTCCGCCAAGGTC
GCCGACCGCATCGTGCGCCTCCTCGCCATCGACCCGGACGGCGCGCGCCGCGAGGTGGTC
GGCCTGTCCGGCCAGACCGTCCTCCGCGCGCTCGCCAACGCGGGCCTCATCGAGCCGGAG
TCCCACCGCCTCGAGGAGATCGACGCCTGCTCCGCCGAGTGCGAGGTCCACATCGCGCAG
GAGTGGCTCGACAAGCTCCCCCCTCCTTCCTACGAGGAGCGCTACGTCCTCACCCGCGCG
TCCCGGAACCGGGAGCTCAACAAGCACGCGCGGCTCGGGTGCCAGGTCGTGCTCACACCG
GAGCTCCAGGGGATGGTCGTCGCCGTTCCGGAGCCCAAGCCATGGGACATCCCGTAA

Peptide Sequence

PEP ID

Os09t0514600-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:20039648:20040374:-1 gene:Os09g0514600 transcript:Os09t0514600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-grasp fold, ferredoxin-type domain containing protein. (Os09t0514600-00)
Sequence

MAIAARALRRIPLHLAPSLSRAFCALSPAAPAPAAASAKVADRIVRLLAIDPDGARREVV
GLSGQTVLRALANAGLIEPESHRLEEIDACSAECEVHIAQEWLDKLPPPSYEERYVLTRA
SRNRELNKHARLGCQVVLTPELQGMVVAVPEPKPWDIP

Transcript Sequence

Transcript ID

Os09t0514600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:20039648:20040374:-1 gene:Os09g0514600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Beta-grasp fold, ferredoxin-type domain containing protein. (Os09t0514600-00)
Sequence

AGATCTCCCACCTCGAACCCTAGCCATGGCGATCGCGGCGCGCGCCCTGCGCCGCATCCC
CCTCCACCTCGCCCCCTCCCTCTCGCGGGCCTTCTGCGCGCTCTCGCCGGCCGCCCCCGC
CCCGGCCGCTGCCTCCGCCAAGGTCGCCGACCGCATCGTGCGCCTCCTCGCCATCGACCC
GGACGGCGCGCGCCGCGAGGTGGTCGGCCTGTCCGGCCAGACCGTCCTCCGCGCGCTCGC
CAACGCGGGCCTCATCGAGCCGGAGTCCCACCGCCTCGAGGAGATCGACGCCTGCTCCGC
CGAGTGCGAGGTCCACATCGCGCAGGAGTGGCTCGACAAGCTCCCCCCTCCTTCCTACGA
GGAGCGCTACGTCCTCACCCGCGCGTCCCGGAACCGGGAGCTCAACAAGCACGCGCGGCT
CGGGTGCCAGGTCGTGCTCACACCGGAGCTCCAGGGGATGGTCGTCGCCGTTCCGGAGCC
CAAGCCATGGGACATCCCGTAATTGCGAGCCGCCGCTGCGATGGTGATGTGAGACTTCCT
TTCCCCCACCGTCTCCCTCGGCGGGTGCGTTCGTGCCGCGCCAACGCTTTTTTTATGTTA
TGGATTCGATGAAAGAATAATGATTTGATGGGCAAAACTTTAGTGCTGATGTTTAAACTT
TTGTTTACTTTGAATGTGGTAACATGTGGATGATGTAATGTGGAATCCCTTGAAATTGCC
TCGGTTC