Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0513200-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:19971392:19975282:-1 gene:Os09g0513200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Solute carrier family 35, member F1. (Os09t0513200-00)
Sequence

ATGGCGCCGGCGGCGGCGAGGTGGCTGCGGCGGGAGGTGTTCGTGGGGCTCGCGCTGGGG
CAGTTCGTCTCGCTGCTCATCACCTCCACCGGCTTCTCCTCCTCCGAGCTCGCCCGCCGA
GGCGTCAACGCGCCAACTTCGCAGTCTCTGCTGAATTACGTCCTTCTTGCGCTTGTTTAT
GGTGGGATACTGATCTACAGAAGGCAACACCTGACGATTAAATGGTACTACTTCTTGATC
CTTGGCATCGTTGATGTAGAAGCTAACTATATTGTTGTGAAGGCTTATCAGTATACATCC
TTAACGAGTGTGATGCTCATCGATTGCTGGGCGATCCCGTGTGTCATTCTCCTCACTTGG
GTCTTCTTGAAGACAAAGTATGGATTGAGGAAGTTCATCGGTGTTGTGATTTGTGTGGCT
GGCATTATATTGGTAGTATTTTCTGATGTCCATGCCTCTGATAGAGCAAAAGGACCCAAC
CCCTTGAAAGGTGATTTGTTTGTCATTGCTGGGGCCATGCTTTATGCTGTCAGTAATGTT
ACCGAGGAGTACTTTGTCAAGAAAAGCAGCAGAATTGAGGTGATGGCAATGCTGGGCGTT
TTTGGAGCAGTTATAAGTGGTATACAAATAAGCATACTTGAACGACAAGAACTTCGGTCA
ACCGAATGGAATGCTGGTGCGATTCTACCTTTCATTGGATTTGCGGTAGCAATGTTCTTG
TTCTACTCAACAGTACCGATTATATTGAAGATATGTGGTGCAACTATGCTCAATCTCTCC
CTTTTGACCTCGGACATGTGGGCTGTTCTAATCCGTATCTTCGCTTACCATGAGAAGGTT
GATTGGATGTATTTCGTTGCTTTTGCTGGCACGGCAGCTGGCCTTGTCATCTACTCATAC
AAGGGCTCCAAGGTGGCGGAGGAGACGGCGCAGGTCGCCGGCGCGACGGACGAGGAGGCC
GCGACGCGAGTTGCCGGCGCCGGAGACGATGAGCCAGCCTCCACCAACAAGGAGGTCTCC
TCGTTGGCTGCTACTACCTCAAGGTAG

Peptide Sequence

PEP ID

Os09t0513200-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:19971392:19975282:-1 gene:Os09g0513200 transcript:Os09t0513200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Solute carrier family 35, member F1. (Os09t0513200-00)
Sequence

MAPAAARWLRREVFVGLALGQFVSLLITSTGFSSSELARRGVNAPTSQSLLNYVLLALVY
GGILIYRRQHLTIKWYYFLILGIVDVEANYIVVKAYQYTSLTSVMLIDCWAIPCVILLTW
VFLKTKYGLRKFIGVVICVAGIILVVFSDVHASDRAKGPNPLKGDLFVIAGAMLYAVSNV
TEEYFVKKSSRIEVMAMLGVFGAVISGIQISILERQELRSTEWNAGAILPFIGFAVAMFL
FYSTVPIILKICGATMLNLSLLTSDMWAVLIRIFAYHEKVDWMYFVAFAGTAAGLVIYSY
KGSKVAEETAQVAGATDEEAATRVAGAGDDEPASTNKEVSSLAATTSR

Transcript Sequence

Transcript ID

Os09t0513200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19971392:19975282:-1 gene:Os09g0513200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Solute carrier family 35, member F1. (Os09t0513200-00)
Sequence

GAGGGGAGGAGAGGGAGAGGGAGCAATGGCGCCGGCGGCGGCGAGGTGGCTGCGGCGGGA
GGTGTTCGTGGGGCTCGCGCTGGGGCAGTTCGTCTCGCTGCTCATCACCTCCACCGGCTT
CTCCTCCTCCGAGCTCGCCCGCCGAGGCGTCAACGCGCCAACTTCGCAGTCTCTGCTGAA
TTACGTCCTTCTTGCGCTTGTTTATGGTGGGATACTGATCTACAGAAGGCAACACCTGAC
GATTAAATGGTACTACTTCTTGATCCTTGGCATCGTTGATGTAGAAGCTAACTATATTGT
TGTGAAGGCTTATCAGTATACATCCTTAACGAGTGTGATGCTCATCGATTGCTGGGCGAT
CCCGTGTGTCATTCTCCTCACTTGGGTCTTCTTGAAGACAAAGTATGGATTGAGGAAGTT
CATCGGTGTTGTGATTTGTGTGGCTGGCATTATATTGGTAGTATTTTCTGATGTCCATGC
CTCTGATAGAGCAAAAGGACCCAACCCCTTGAAAGGTGATTTGTTTGTCATTGCTGGGGC
CATGCTTTATGCTGTCAGTAATGTTACCGAGGAGTACTTTGTCAAGAAAAGCAGCAGAAT
TGAGGTGATGGCAATGCTGGGCGTTTTTGGAGCAGTTATAAGTGGTATACAAATAAGCAT
ACTTGAACGACAAGAACTTCGGTCAACCGAATGGAATGCTGGTGCGATTCTACCTTTCAT
TGGATTTGCGGTAGCAATGTTCTTGTTCTACTCAACAGTACCGATTATATTGAAGATATG
TGGTGCAACTATGCTCAATCTCTCCCTTTTGACCTCGGACATGTGGGCTGTTCTAATCCG
TATCTTCGCTTACCATGAGAAGGTTGATTGGATGTATTTCGTTGCTTTTGCTGGCACGGC
AGCTGGCCTTGTCATCTACTCATACAAGGGCTCCAAGGTGGCGGAGGAGACGGCGCAGGT
CGCCGGCGCGACGGACGAGGAGGCCGCGACGCGAGTTGCCGGCGCCGGAGACGATGAGCC
AGCCTCCACCAACAAGGAGGTCTCCTCGTTGGCTGCTACTACCTCAAGGTAGTAG