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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0513100-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:19966919:19970151:1 gene:Os09g0513100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospholipase A1. (Os09t0513100-01);Similar to phospholipase A1. (Os09t0513100-02)
Sequence

GTGAACAAATGGATTTGTATTGCATGTCCATTTCAAGGTGCCCCAGGATGCATCAATGAT
TCTCTGCTAACTGGGCTACAATTTGTTTATGGGTTTGAAAGCTTCTTTTTTGTTTCTAGA
TGGGTGATGCATCAACTGCTTGTTGAATGCCCATCCATCTACGAAATGCTGCCAAATCCA
CATTTCAAGTGGAAGAAAGCACCAGTTGTTCAGGTTTGGAGAAAGAAACCTGAAAAGGAT
GGAATAGCGGAGTTAGTTCTGTATGAAGCTACCGATTGTTTATCTCTGTTTCAAGAAGCT
TTAAGGAACAATGAGCTCAAGTATAATGGGAAGACAATTGCACTGCCATTCAATATGTCA
GTCTTCAAGTGGGCCACTGAGACCCGCCGAATTCTTGAGGATGCTGAATTACCAGATACT
GTGAGCTTTTATAATATATATGGGACATCTTACGATACTCCATATGATGTTTGTTACGGC
TCTGAAAGCTCCCCAATTGGAGATCTGTCAGAAGTGTGCCACACAATGCCAGTGTACACT
TATGTGGATGGAGATGGCACAGTTCCTATTGAGTCAACTATGGCTGATGGATTTGCAGCC
AAGGAAAGAGTTGGCATCGAGGCCGACCACCGAGGGCTGCTTTGCGACGAGAATGTGTTT
GAGCTTCTGAAGAAATGGCTCGGCGTGAAGGAAGAAAGCACACGGCGGCGTCGGTTGTCC
AAGTCCAAAGTGACAGACTTTGCACCATCATAA

Peptide Sequence

PEP ID

Os09t0513100-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:19966919:19970151:1 gene:Os09g0513100 transcript:Os09t0513100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospholipase A1. (Os09t0513100-01);Similar to phospholipase A1. (Os09t0513100-02)
Sequence

VNKWICIACPFQGAPGCINDSLLTGLQFVYGFESFFFVSRWVMHQLLVECPSIYEMLPNP
HFKWKKAPVVQVWRKKPEKDGIAELVLYEATDCLSLFQEALRNNELKYNGKTIALPFNMS
VFKWATETRRILEDAELPDTVSFYNIYGTSYDTPYDVCYGSESSPIGDLSEVCHTMPVYT
YVDGDGTVPIESTMADGFAAKERVGIEADHRGLLCDENVFELLKKWLGVKEESTRRRRLS
KSKVTDFAPS

Transcript Sequence

Transcript ID

Os09t0513100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19966919:19970151:1 gene:Os09g0513100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phospholipase A1. (Os09t0513100-01);Similar to phospholipase A1. (Os09t0513100-02)
Sequence

GTGAACAAATGGATTTGTATTGCATGTCCATTTCAAGGTGCCCCAGGATGCATCAATGAT
TCTCTGCTAACTGGGCTACAATTTGTTTATGGGTTTGAAAGCTTCTTTTTTGTTTCTAGA
TGGGTGATGCATCAACTGCTTGTTGAATGCCCATCCATCTACGAAATGCTGCCAAATCCA
CATTTCAAGTGGAAGAAAGCACCAGTTGTTCAGGTTTGGAGAAAGAAACCTGAAAAGGAT
GGAATAGCGGAGTTAGTTCTGTATGAAGCTACCGATTGTTTATCTCTGTTTCAAGAAGCT
TTAAGGAACAATGAGCTCAAGTATAATGGGAAGACAATTGCACTGCCATTCAATATGTCA
GTCTTCAAGTGGGCCACTGAGACCCGCCGAATTCTTGAGGATGCTGAATTACCAGATACT
GTGAGCTTTTATAATATATATGGGACATCTTACGATACTCCATATGATGTTTGTTACGGC
TCTGAAAGCTCCCCAATTGGAGATCTGTCAGAAGTGTGCCACACAATGCCAGTGTACACT
TATGTGGATGGAGATGGCACAGTTCCTATTGAGTCAACTATGGCTGATGGATTTGCAGCC
AAGGAAAGAGTTGGCATCGAGGCCGACCACCGAGGGCTGCTTTGCGACGAGAATGTGTTT
GAGCTTCTGAAGAAATGGCTCGGCGTGAAGGAAGAAAGCACACGGCGGCGTCGGTTGTCC
AAGTCCAAAGTGACAGACTTTGCACCATCATAATGAAAGTACTAATCAAGTCAAGGTGCT
CAAAACAAAACCATCACAATCTCTTCAAGGCAGCCATTATTTTTTGGGCTCTTCACTTGA
AGAGAAGATGAATATAGCGAAACACTTGTGTTTAAAATGTTACTTGTTATTCCGGAAGGG
GAAGATGATATGAACCCTACCATTCGTAGCTGAAAATTGTGACACTTTGTGACGTTGTGA
CGGTTATTTAATTTGCATCCAGTAACGGAGCAAAACTTAAAGGAAATAAATAAATCGTAT
TATTTACAAAGC