Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0512900-03
CDS Infomation	cds chromosome:IRGSP-1.0:9:19955895:19957739:1 gene:Os09g0512900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to arabinogalactan protein. (Os09t0512900-01);Similar to arabinogalactan protein. (Os09t0512900-02);Similar to arabinogalactan protein. (Os09t0512900-03)
Sequence	ATGGCGGAGAACCCGCAGCTGTTCGGGAACGGGATGCTGGTGCCCTTCTACGGCGAGATG TTCGTCCTCGCCCGCGACGGCGTCGAGTTCCACGTCGACAAGATCCCCTCAGCTCCTGGT GGTCATGCGAAAACAAAGGGCACAATTTACCTGTCAAACATAAGGATGGTCTTTGTCGCC AGCAAGCCTGTTGGGAACTTCTTTGCTTTTGATATGCCCCTGTTGTATGTGCATGGTGAG AAATTCAATCAGCCAATATTTCACTGCAACAACATATCGGGTTTCGTTGAGCCGGTTGTA CCAGAGAACCAGAACAGGGCCCTGTACTCGACCCACACTTTCAAGATCTTGTTCAAGGAG GGTGGCTGTGGTACCTTTGTTCCTCTCTTCCTAAACCTGGTTGCATCTGTGCGACGCTAC AATCAGTTTGAGGCCCAGTCTGCCGCAAGTATGGCGCCACGTGTGGACCCGCTACAAGCT GTTCAGACTCCTGTTGATGATATGATGCGTCATGCGTATGTTGATCCGAACGATCCTACA AAGATTTTCCTTCAGCAGCCTGCGCCAGAGTCACAGCTGAGGAGGAGAAACTACCACGGA CGGGCTGACAATGCGTACTAG

Peptide Sequence

PEP ID	Os09t0512900-03
PEP Infomation	pep chromosome:IRGSP-1.0:9:19955895:19957739:1 gene:Os09g0512900 transcript:Os09t0512900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to arabinogalactan protein. (Os09t0512900-01);Similar to arabinogalactan protein. (Os09t0512900-02);Similar to arabinogalactan protein. (Os09t0512900-03)
Sequence	MAENPQLFGNGMLVPFYGEMFVLARDGVEFHVDKIPSAPGGHAKTKGTIYLSNIRMVFVA SKPVGNFFAFDMPLLYVHGEKFNQPIFHCNNISGFVEPVVPENQNRALYSTHTFKILFKE GGCGTFVPLFLNLVASVRRYNQFEAQSAASMAPRVDPLQAVQTPVDDMMRHAYVDPNDPT KIFLQQPAPESQLRRRNYHGRADNAY

Transcript Sequence

Transcript ID	Os09t0512900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19955895:19957739:1 gene:Os09g0512900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to arabinogalactan protein. (Os09t0512900-01);Similar to arabinogalactan protein. (Os09t0512900-02);Similar to arabinogalactan protein. (Os09t0512900-03)
Sequence	ATCCACCACCGCGCTCGGCGAGGCGATCCACCGGCGGCGAGGAGAGGCGCGCGGGAGCGG CCGGAGATGGCGGAGAACCCGCAGCTGTTCGGGAACGGGATGCTGGTGCCCTTCTACGGC GAGATGTTCGTCCTCGCCCGCGACGGCGTCGAGTTCCACGTCGACAAGATCCCCTCAGCT CCTGGTGGTCATGCGAAAACAAAGGGCACAATTTACCTGTCAAACATAAGGATGGTCTTT GTCGCCAGCAAGCCTGTTGGGAACTTCTTTGCTTTTGATATGCCCCTGTTGTATGTGCAT GGTGAGAAATTCAATCAGCCAATATTTCACTGCAACAACATATCGGGTTTCGTTGAGCCG GTTGTACCAGAGAACCAGAACAGGGCCCTGTACTCGACCCACACTTTCAAGATCTTGTTC AAGGAGGGTGGCTGTGGTACCTTTGTTCCTCTCTTCCTAAACCTGGTTGCATCTGTGCGA CGCTACAATCAGTTTGAGGCCCAGTCTGCCGCAAGTATGGCGCCACGTGTGGACCCGCTA CAAGCTGTTCAGACTCCTGTTGATGATATGATGCGTCATGCGTATGTTGATCCGAACGAT CCTACAAAGATTTTCCTTCAGCAGCCTGCGCCAGAGTCACAGCTGAGGAGGAGAAACTAC CACGGACGGGCTGACAATGCGTACTAGTGTTCTTACCTGATTGCAAAGAACCCATATGTT CGAGCCTATGAACATATGGATTTCGGCCTCTAGTCGCGTATCATGCTATTACGTGGGTGT GAAATGAAAGCTTCATGTTGCCCAGAAACCTATTGTATATCTTTTATGCCATATTCAGTT GCATATCTCAATAATGGTGTACATATTCCGTAGTCCTCTGGACTTGGTGCAAAAAATGGT TTATTTGATCCCATGGTGTATGGAATTATCATTGCTCGTGCCAGCTTGTAAATCACAGAA ACAATACGATTATTGCTTGTGTT