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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0512800-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:19950775:19953947:1 gene:Os09g0512800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA231 description:Similar to snRK1-interacting protein 1. (Os09t0512800-00)
Sequence

ATGGAGGCGCTCCGGCTGTCGGGCCCGGCGGCGCCGCCCTTCGTCCCCGCGGCGAGGGTG
GCGGCCGCGTGGGGCGCGCGTAGGCGGGGGGCGTCGAGGTCGTCGTCGTCCGTGGTGGCG
AAGATGGAGGGGGGCGGAGGCGGGAAGGGGGTGCCGACCACCAACTACGTGGTGCCGCTC
GACAAGGCCACCGGGATGACGCGCCCGCTCGTCGAGATCCTCCGGGACCTCAACAAGCGC
GTCCCCGACAAGATCATCGACCCCGACACCAACACCGTCCCCTGGTACCATGCCAATAGA
ATGCTGAGCTTTTATGCACCAGGTTGGTGTGGAGAAGTTCGCAATGTTATTTATTCTGAC
AATGGAACTGTAACCGTGGTTTATCGAGTGATTCTGAGAGGAACAGACGGAGAGGCATAC
AGAGAGGCTACTGGCACGGCACCAGTGCACGAGGGCCGTAACGACGATGCTGTTGCGGCT
GCGGAGGAAGCAGCGTTCTGCAAAGCCTGCGCACGGTTTGGTTTCGGCCTCTACCTATAC
CACCAGGACGAGATCCCATAG

Peptide Sequence

PEP ID

Os09t0512800-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:19950775:19953947:1 gene:Os09g0512800 transcript:Os09t0512800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA231 description:Similar to snRK1-interacting protein 1. (Os09t0512800-00)
Sequence

MEALRLSGPAAPPFVPAARVAAAWGARRRGASRSSSSVVAKMEGGGGGKGVPTTNYVVPL
DKATGMTRPLVEILRDLNKRVPDKIIDPDTNTVPWYHANRMLSFYAPGWCGEVRNVIYSD
NGTVTVVYRVILRGTDGEAYREATGTAPVHEGRNDDAVAAAEEAAFCKACARFGFGLYLY
HQDEIP

Transcript Sequence

Transcript ID

Os09t0512800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19950775:19953947:1 gene:Os09g0512800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA231 description:Similar to snRK1-interacting protein 1. (Os09t0512800-00)
Sequence

CTCCTCCTCCTCCTCTTCCTCCACCCGCTCCCCACCCACCACCACCACCTCTCACCTCGT
CACCGATCACCGAGCGCATTTCGCATGGAGGCGCTCCGGCTGTCGGGCCCGGCGGCGCCG
CCCTTCGTCCCCGCGGCGAGGGTGGCGGCCGCGTGGGGCGCGCGTAGGCGGGGGGCGTCG
AGGTCGTCGTCGTCCGTGGTGGCGAAGATGGAGGGGGGCGGAGGCGGGAAGGGGGTGCCG
ACCACCAACTACGTGGTGCCGCTCGACAAGGCCACCGGGATGACGCGCCCGCTCGTCGAG
ATCCTCCGGGACCTCAACAAGCGCGTCCCCGACAAGATCATCGACCCCGACACCAACACC
GTCCCCTGGTACCATGCCAATAGAATGCTGAGCTTTTATGCACCAGGTTGGTGTGGAGAA
GTTCGCAATGTTATTTATTCTGACAATGGAACTGTAACCGTGGTTTATCGAGTGATTCTG
AGAGGAACAGACGGAGAGGCATACAGAGAGGCTACTGGCACGGCACCAGTGCACGAGGGC
CGTAACGACGATGCTGTTGCGGCTGCGGAGGAAGCAGCGTTCTGCAAAGCCTGCGCACGG
TTTGGTTTCGGCCTCTACCTATACCACCAGGACGAGATCCCATAGAGATGAGGATGGCTT
TGAGGCTCATTTCTGCAGAGGATCTGGTGGTCACAAAGTTTGTAGGAAAACCGCGATGAA
TTTTCGCACCTTGCTGGTAGCACAAGGCGAGCTTTTGCTGATGCATATTTACACAAGAAA
AGCTTTAATTTGTTGCTGCCTCAGTTGTTAAATGTATTGAGTCCATGTCGTCCAGCATAG
TTTGTCAGATAGGAAAAGAAACATTAAAATCGTGCCGTTGCATAGTTGCTGTGTTTATAC
CCGTTTTTTGTATTTGAGTCCACGGATGGATATTTTTGTTGTCATGATAATGAAGTTGCT
TCGACA