Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0510700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19823916:19831332:-1 gene:Os09g0510700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN4-complementing protein homolog. (Os09t0510700-01)
Sequence	ATGTTTTTCACCAGGCTGGATGACTCGCCCATGTTCAGGAAGCAGATACAATCCCTTGAA GAAGGTTCTGAATTGCTGAGAGAGAGATGTTTGAGGTTTCATAAAGGTTGCCGCAAATAC ACTGAAGGACTAGGGGAAGCATATGATGGAGATATTGCATTTGCAAGTTCACTGGAAGCA TTTGGAGGGGGGCATAATGATCCAATCAGTGTTGCTTTTGGAGGACCCGTCATGACCAAA TTTACAATTGCCCTGAGAGAAATTGGAACTTACAAGGAAGTATTGCGCTCACAGGTTGAG AATATGCTAAATGACAAGTTGCTGCAATTTGTGGACATTGATTTGCATGATGTGAAGGAT GCCAGGAAGCGTTTTGACAAGGCTAGCCTTCTCTATGACCAGGCTCGTGAGAGGTATTTA TCCTTGAAGAAAGGCACACGGACAGATGTAGCAACTGCGGTGGAGGATGAGCTCCATAGT GCCAGATCCTCATTTGAGCAAGCTCGTTTCAACCTGGTGACTGCACTTTCAAATATCGAG GCCAAGAAAAGATTTGAATTTTTAGAGGCTGTCAGTGGGACAATGGATGCACATCTGCGC TATTTCAAACAAGGATATGAGCTACTCCATCAGATGGAGCCATATATCAATCAAGTTCTT GCTTATGCACAGCAATCAAGGGAACGGTCTAACTATGAGCAAGCTGCTCTTGTAGAGAGG ATGCAAGAGTTTAAAAGGCAAATTGATCGGGAAAGTCGTTGGTCACCAAATGGCATAAAC GATTCCCCTAATGGTGATGGAATACAAGCAATTGGTAGAAGTTCACACAAAATGATTGAG GCGGTGATGCAATCAGCTTCAAAGGGCAAGGTACAGACCATTCGACAAGGCTATCTCTCA AAGCGATCTTCAAACTTGAGAGGTGACTGGAAAAGAAGGTTCTTTGTTCTTGATAGCCGA GGAATGTTATATTATTATCGCAAGCAGAATAGTAGACCATCTAGTGGTTATACTAACCAA AGAAGTAGCGCTCCGTCAGAGCATGGTTCTGGGTTGCTTAGCAGATGGTTCTCTTCTCAT TATCATGGTGGAGTACACGATGAGAAATCTGTAGCAAGGCATACCGTGAACTTGCTAACA TCAACCATTAAAGCTGATGCTGACCAATCGGATCTGCGGTTCTGCTTCAGAATAATTTCT CCCACAAAAAACTACACTTTGCAGGCAGAGAGTGCGATGGATCAGATGGATTGGATTGAA AAAATAACTGGTGTCATCGCTTCTTTGCTGAGCTCCCAATCGCCCGAACGGCGTCTTCTG TCGAGCCCAAAGGGTAGCGGCCATAATCGAACTGCCAGCGAAAGTAGTTCCTTTAGTAGC TCGACAGAACTTGACCATTCCATTAGTGAAGACTGCATGCTGGAAAGGAACTCTGGAAGT GGGTATTTTGACCACTCTGGCAGAGCCATCCAGCATCACCGAACCAGCATGAAACCTGAC AAGCCAATTGACTTGCTTAGGAAAGTGGTCGGCAATAATATTTGTGCTGATTGTGGTGCA GCAGAGCCTGACTGGGCATCCCTAAACCTTGGAATTCTTCTATGCATCGAATGCTCTGGG GTACACAGAAATCTCGGTGTGCATATATCTAAGGTAAGATCACTGACACTTGATGTCAGG GTCTGGGAGCCATCTGTAATCAATCTCTTCCAGTCATTAGGAAACACATTTGCCAACACT ATCTGGGAAGATATGTTACCTTCATCAAGCAGTGTTGATCATGGTGATAATTCAAGGGCT GATGGACTAGAAAACACATCACATAACTTAATTTTCAGCAAGCCTAAACACTCGGATCAT ATTGCTGTGAAGGAGAAATTTATTCATGCAAAGTATGCCGAGCGAGATTATGTGCGAAAG CTTAATATGGATGATAGCCTGGTAGCTCAACAGATGTGGGAAAATGTTAGTTCAAACAAC AAGAAGGGGGTTTACAGTCTGATTGTGGGGTCAAATGCCGATGTAAATTTAACTTATGGG CAGACATCATTTAATTCGGCCCTAACCCTTGGAAAAGCTCTACTTTTACAAGAGCAGCCA ACTTCACCATCAGATGGAAGTTCCAGATGTTTTGATCGTAGTTCACTTGAAAGGATTTCT CCCAGGGACTCTCTTTCTCTTGCCAGCACAAGTGCACGTATAGATGAATTGGATGATTGT GTCGAGGGATTGTCATTGCTTCATCTAGCATGCCGTGTTGCAGATGTGGGTATGGTCGAA CTTCTCTTGCAATATGGTGCCAACGTAAATTCTGCAGACTCTAGAGGTCGAACGCCTCTT CATCACAGCATCTTGAAAGGACGACATATGTTTGCAAAGTTGTTGCTATCCAGGGGCGCT GATTCACAAGCCACGGACCGAGATGGTAGAACAGCATTACAGTATGCTATTGACAGTGGA ACTATTGACGACGAAGAGATTCTTGTTTTGTTAGAAGACCCAAGTAGATAA

Peptide Sequence

PEP ID	Os09t0510700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19823916:19831332:-1 gene:Os09g0510700 transcript:Os09t0510700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN4-complementing protein homolog. (Os09t0510700-01)
Sequence	MFFTRLDDSPMFRKQIQSLEEGSELLRERCLRFHKGCRKYTEGLGEAYDGDIAFASSLEA FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVENMLNDKLLQFVDIDLHDVKD ARKRFDKASLLYDQARERYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTALSNIE AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER MQEFKRQIDRESRWSPNGINDSPNGDGIQAIGRSSHKMIEAVMQSASKGKVQTIRQGYLS KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYTNQRSSAPSEHGSGLLSRWFSSH YHGGVHDEKSVARHTVNLLTSTIKADADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE KITGVIASLLSSQSPERRLLSSPKGSGHNRTASESSSFSSSTELDHSISEDCMLERNSGS GYFDHSGRAIQHHRTSMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSG VHRNLGVHISKVRSLTLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSVDHGDNSRA DGLENTSHNLIFSKPKHSDHIAVKEKFIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNN KKGVYSLIVGSNADVNLTYGQTSFNSALTLGKALLLQEQPTSPSDGSSRCFDRSSLERIS PRDSLSLASTSARIDELDDCVEGLSLLHLACRVADVGMVELLLQYGANVNSADSRGRTPL HHSILKGRHMFAKLLLSRGADSQATDRDGRTALQYAIDSGTIDDEEILVLLEDPSR

Transcript Sequence

Transcript ID	Os09t0510700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19823916:19831332:-1 gene:Os09g0510700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GCN4-complementing protein homolog. (Os09t0510700-01)
Sequence	GTTCTCCTTTCCGCTTTACCTCTCTCCTCTCTCCTCTCGCCTCGCCGAGCCATTCGATTC CTCCGCCGAATCGCCGCCATTACGCCCAATTCCGGCCGCCTCCTAGGGTTTCGCCCGCGC TCCGCCACCGTCGCCCTCCCCCCGGCACTGCGCCGCCTTCCCCACGCCGCCCTGGAGGAG CTGCTCTGACTGCGGGGAGGTGTAGGAGGAGGAGGGCGGAGGAGGTGGTGGTGGTGGTGG TGGAGAGAGAGAGGAGTGCGTCGCCGACGAGGTGGGTGGTGGTGGTGCGAGGAGAGGGCG TTGATGAGGTTGTGGTGGTAGGGAGGCAAAGCAGTGTGGTGGTCGCGGCGGCGGGCGGCG GCGGAGATGTTTTTCACCAGGCTGGATGACTCGCCCATGTTCAGGAAGCAGATACAATCC CTTGAAGAAGGTTCTGAATTGCTGAGAGAGAGATGTTTGAGGTTTCATAAAGGTTGCCGC AAATACACTGAAGGACTAGGGGAAGCATATGATGGAGATATTGCATTTGCAAGTTCACTG GAAGCATTTGGAGGGGGGCATAATGATCCAATCAGTGTTGCTTTTGGAGGACCCGTCATG ACCAAATTTACAATTGCCCTGAGAGAAATTGGAACTTACAAGGAAGTATTGCGCTCACAG GTTGAGAATATGCTAAATGACAAGTTGCTGCAATTTGTGGACATTGATTTGCATGATGTG AAGGATGCCAGGAAGCGTTTTGACAAGGCTAGCCTTCTCTATGACCAGGCTCGTGAGAGG TATTTATCCTTGAAGAAAGGCACACGGACAGATGTAGCAACTGCGGTGGAGGATGAGCTC CATAGTGCCAGATCCTCATTTGAGCAAGCTCGTTTCAACCTGGTGACTGCACTTTCAAAT ATCGAGGCCAAGAAAAGATTTGAATTTTTAGAGGCTGTCAGTGGGACAATGGATGCACAT CTGCGCTATTTCAAACAAGGATATGAGCTACTCCATCAGATGGAGCCATATATCAATCAA GTTCTTGCTTATGCACAGCAATCAAGGGAACGGTCTAACTATGAGCAAGCTGCTCTTGTA GAGAGGATGCAAGAGTTTAAAAGGCAAATTGATCGGGAAAGTCGTTGGTCACCAAATGGC ATAAACGATTCCCCTAATGGTGATGGAATACAAGCAATTGGTAGAAGTTCACACAAAATG ATTGAGGCGGTGATGCAATCAGCTTCAAAGGGCAAGGTACAGACCATTCGACAAGGCTAT CTCTCAAAGCGATCTTCAAACTTGAGAGGTGACTGGAAAAGAAGGTTCTTTGTTCTTGAT AGCCGAGGAATGTTATATTATTATCGCAAGCAGAATAGTAGACCATCTAGTGGTTATACT AACCAAAGAAGTAGCGCTCCGTCAGAGCATGGTTCTGGGTTGCTTAGCAGATGGTTCTCT TCTCATTATCATGGTGGAGTACACGATGAGAAATCTGTAGCAAGGCATACCGTGAACTTG CTAACATCAACCATTAAAGCTGATGCTGACCAATCGGATCTGCGGTTCTGCTTCAGAATA ATTTCTCCCACAAAAAACTACACTTTGCAGGCAGAGAGTGCGATGGATCAGATGGATTGG ATTGAAAAAATAACTGGTGTCATCGCTTCTTTGCTGAGCTCCCAATCGCCCGAACGGCGT CTTCTGTCGAGCCCAAAGGGTAGCGGCCATAATCGAACTGCCAGCGAAAGTAGTTCCTTT AGTAGCTCGACAGAACTTGACCATTCCATTAGTGAAGACTGCATGCTGGAAAGGAACTCT GGAAGTGGGTATTTTGACCACTCTGGCAGAGCCATCCAGCATCACCGAACCAGCATGAAA CCTGACAAGCCAATTGACTTGCTTAGGAAAGTGGTCGGCAATAATATTTGTGCTGATTGT GGTGCAGCAGAGCCTGACTGGGCATCCCTAAACCTTGGAATTCTTCTATGCATCGAATGC TCTGGGGTACACAGAAATCTCGGTGTGCATATATCTAAGGTAAGATCACTGACACTTGAT GTCAGGGTCTGGGAGCCATCTGTAATCAATCTCTTCCAGTCATTAGGAAACACATTTGCC AACACTATCTGGGAAGATATGTTACCTTCATCAAGCAGTGTTGATCATGGTGATAATTCA AGGGCTGATGGACTAGAAAACACATCACATAACTTAATTTTCAGCAAGCCTAAACACTCG GATCATATTGCTGTGAAGGAGAAATTTATTCATGCAAAGTATGCCGAGCGAGATTATGTG CGAAAGCTTAATATGGATGATAGCCTGGTAGCTCAACAGATGTGGGAAAATGTTAGTTCA AACAACAAGAAGGGGGTTTACAGTCTGATTGTGGGGTCAAATGCCGATGTAAATTTAACT TATGGGCAGACATCATTTAATTCGGCCCTAACCCTTGGAAAAGCTCTACTTTTACAAGAG CAGCCAACTTCACCATCAGATGGAAGTTCCAGATGTTTTGATCGTAGTTCACTTGAAAGG ATTTCTCCCAGGGACTCTCTTTCTCTTGCCAGCACAAGTGCACGTATAGATGAATTGGAT GATTGTGTCGAGGGATTGTCATTGCTTCATCTAGCATGCCGTGTTGCAGATGTGGGTATG GTCGAACTTCTCTTGCAATATGGTGCCAACGTAAATTCTGCAGACTCTAGAGGTCGAACG CCTCTTCATCACAGCATCTTGAAAGGACGACATATGTTTGCAAAGTTGTTGCTATCCAGG GGCGCTGATTCACAAGCCACGGACCGAGATGGTAGAACAGCATTACAGTATGCTATTGAC AGTGGAACTATTGACGACGAAGAGATTCTTGTTTTGTTAGAAGACCCAAGTAGATAATCC ATTAGCTACCAATACCCCTTCAGTTCAGCAGAGCAAAGCTTTGTGTGCTCAGTTGCCTCC ATGACAGAGTCAACCGGCACAGCAAGCTCCAAGTTTGTGTCGCCGATGATCACAATCTGT GACGAGAACAGTATTGGTGTTCTGGAGCTGCATTGTGCCCTCCTCGTTTTCCGGGTCTCG TCTTAGCGTGACGAATGACCAGACCCCAATTTCCTTCTGGTTGCAGTTTGC