Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0509400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:19769695:19775038:1 gene:Os09g0509400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0509400-01);Hypothetical conserved gene. (Os09t0509400-02)
Sequence

AATCTGAATAGGAACAAAGTGTGGGCAAGAGGAAAATTGGTTTCCTTTTGCTGGAGTAAC
TCTAGTGAGATGGGTTTGCCTCAGGTTCCTGCAATCAAGGAGGAAGTGCTTCCTACAATG
AGTGCATCTCTTATTGTTCGTCCTCATTTTGCGGGGAATAGCACCTGTCATTTGGGTAAG
CTTCCTGCAGAAAGCTCAAGTAACAGGGCATCTCCATGCTCATACATCAGTGATTTCAAG
AGAAATGATGTTTTAGATTCTTTGAATGGATTTGATGGCAATTTTAGAGCCAGCCATGCT
GCTTATGGGCCTGCAGGCTTCCAAGGTCTAAAACCTGATACAGGGGATGTAGGTTCCAGA
TCAGGCCCTAAATTGGGATCAAATGTTCAGATGCCTGCAATGAGGATTGTTGGCTTTGAA
TCAGGTTTTGCTAATTCCACTGGAGGTCCTGATACGATGGTAGCTGACAATACGGATTCA
CCTTTAGTTATTGATAATTGCCATTCATTGATTGAACAGCATGGGCCTCATGCGAGGAAA
AGGGTGTTGTCGCCTTTGAACAATGCGCTCCCTGGACATTTCCGAGGTGATGCCCTGAAT
ATTGGTTCTGGTGATGCCAAAATTCAGCATTCTGATTGTGCTAGGAGACTTTATACTTCT
GGCTTTCAAGATCGTAAAAAGGCAAATACTGCAATTCTTGATTCTTTTGAGGCACCTACA
TGGCCAGCTTCGAGATACTCCAACTGGAGTACAGAGCAGGGTGTCGATAAATTTAGTGGT
AGTACATTCACTGATGGTCCTTTGCTTGAGAGCAGGGAGTCATTTCCTTGTTCAGATCAC
CTGGAAGCTCTTGAAAGTGTTGCTGTTCCACTTGCAAAATTGGCACATCCTCCTCTGCTT
AATCTGTCTCCTCTTGGCCCAACATGGATGCATGGAACAAATACTGTAGGATCTCATGGA
GAATCATTGAGAGAAACTGAAGGTTCAACCTGTGAAGGGTATTCAGAAGGTCATGGTAGG
TCAAGGATAAGAGATGCGTTTGAAAAAACTAATATCTTACATGATGACTTTGATATGAGG
ATCCCTAAGAAGAGTTCAGATAGAAAATCTCAAAACTGGGGCCCGGAATCTGCCTCTGTA
TCCCCACGCATTGGATGTATTCGGAGTATTGGTCTCCTTCCTGTACGAAGGTCGTTAATT
GGCTCTTTTGAGGAATCTCTTTTATCTGGTCGCTATTCCTGTGGAAAAGACAATCAGAAT
ATTGACGGTTTCCTTGCTGTCCTGAATGTGACTGGTGGTAACTTCTCTCCCCCAACTCAG
AAGCTTCCATTTTCAGCTACCAGCATTGATGAGAACAGCTCCTTACTCTACTATTCATCG
ATCGATCTTGTGGGGAGGCTGCCTATGAGCAGTAGCAAAAGCCCAAAGCTCAAAAGAAGC
CTGAGTAATCATGATTCACGATCAGCGAAGAGTCGGTTACGTATCCCAGTTAAAGGGCGT
GTGCAGCTGGTTGTCAGTAACCCAGAGAAGACACCGCTACATACCTTCTTCTGCAACTAT
GATTTGAGTGACATGCCTGCTGGAACCAAGACTTTCATGCGGCAAAAGGTCACTCTGTTC
CCTGTTTCTCCCTCTAATCAAAAGAAAGAAGGAAGCAAGGCCAATGAAACAAAGGTCGAG
TCAGTCCAGTTTGGGAGTGAACTTAGAGAATGCGGCACTCTATTTTCTGAATGCTGTAGA
CCAGGGCAGAACTGCAACTTGATCGATGACTCGGAAAAGGGCGGCCGCAAGAACATGACA
TGTTGCTCTATGGAGTGTGACATTAGAGAATCAAATGACTCTAGCTCTCTAGAAACTTCA
GAAAATGGCAGTAGTACCAATGTTTGCTGTTGTCAATCAGACACATTTCCCTTAGGTGAA
AAGAAATACTGCTGTAGATCGTCCAAGATCAATGATCCAGCTGGAGGTGCTCTTCGTTAT
GCTTTGCACCTACGATTTCTGAGCCCATTTGCCAAGAAACCGTCAAGATCTATGCAGCGT
AGCAAATCTGATGTATCATCAGAACCATACAACCATAGTTCAGGGCCTGAGGAACACAGA
CGATTCTATCTCTACAATGATGTTAGAGTTGTCTTTCCTCAAAGACACTCAGATGCAGAT
GAAGGCGAGCTGCGGGTCGAGCACGACTTCCCTGCTGATCCCAAGTACTTCGACATAAGC
AACTGA

Peptide Sequence

PEP ID

Os09t0509400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:19769695:19775038:1 gene:Os09g0509400 transcript:Os09t0509400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0509400-01);Hypothetical conserved gene. (Os09t0509400-02)
Sequence

NLNRNKVWARGKLVSFCWSNSSEMGLPQVPAIKEEVLPTMSASLIVRPHFAGNSTCHLGK
LPAESSSNRASPCSYISDFKRNDVLDSLNGFDGNFRASHAAYGPAGFQGLKPDTGDVGSR
SGPKLGSNVQMPAMRIVGFESGFANSTGGPDTMVADNTDSPLVIDNCHSLIEQHGPHARK
RVLSPLNNALPGHFRGDALNIGSGDAKIQHSDCARRLYTSGFQDRKKANTAILDSFEAPT
WPASRYSNWSTEQGVDKFSGSTFTDGPLLESRESFPCSDHLEALESVAVPLAKLAHPPLL
NLSPLGPTWMHGTNTVGSHGESLRETEGSTCEGYSEGHGRSRIRDAFEKTNILHDDFDMR
IPKKSSDRKSQNWGPESASVSPRIGCIRSIGLLPVRRSLIGSFEESLLSGRYSCGKDNQN
IDGFLAVLNVTGGNFSPPTQKLPFSATSIDENSSLLYYSSIDLVGRLPMSSSKSPKLKRS
LSNHDSRSAKSRLRIPVKGRVQLVVSNPEKTPLHTFFCNYDLSDMPAGTKTFMRQKVTLF
PVSPSNQKKEGSKANETKVESVQFGSELRECGTLFSECCRPGQNCNLIDDSEKGGRKNMT
CCSMECDIRESNDSSSLETSENGSSTNVCCCQSDTFPLGEKKYCCRSSKINDPAGGALRY
ALHLRFLSPFAKKPSRSMQRSKSDVSSEPYNHSSGPEEHRRFYLYNDVRVVFPQRHSDAD
EGELRVEHDFPADPKYFDISN

Transcript Sequence

Transcript ID

Os09t0509400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19769695:19775038:1 gene:Os09g0509400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0509400-01);Hypothetical conserved gene. (Os09t0509400-02)
Sequence

CCGGAGGGGAGAGAAAATCCATGGAATCCGCCTATTTAACCATGAGAAGGGAGAAGCGAA
GATAGGAGAGAGAAGAACACCACCACCAATCCACCATCACGAGGAGGAGGAGAAGAGAAG
ACGCGCAAGCGAAATCCAGGGGAGGAGGGCGAGCGAGAGAGAGAGAGATTCTCGCGGCAG
GAAATGGCCCATTCCGCTTGCTGCTGGACTCTGATCTGATCTATTGGAATGGTTCATCCC
AGGTTCCTTGTTGCTTGTTCAGGCTCCAAATTGTGCTTCATCTCCAATTGTTGCAGTAAC
TATTGGAACATGATTGGTGGTGGGATGGTGAAATCATTAGTGCTGATGGGGTTCGATTCA
GAAGCCACATTGTAGTTTTAGCCTTCTTGTGTCATCATAGTTTAGCTGATTATTACTGGA
ACAATTGCTAGAGACTTTGTTGCTGAAAATAAGAGGCTGAAATGGATCATGGTAAAATCT
GAATAGGAACAAAGTGTGGGCAAGAGGAAAATTGGTTTCCTTTTGCTGGAGTAACTCTAG
TGAGATGGGTTTGCCTCAGGTTCCTGCAATCAAGGAGGAAGTGCTTCCTACAATGAGTGC
ATCTCTTATTGTTCGTCCTCATTTTGCGGGGAATAGCACCTGTCATTTGGGTAAGCTTCC
TGCAGAAAGCTCAAGTAACAGGGCATCTCCATGCTCATACATCAGTGATTTCAAGAGAAA
TGATGTTTTAGATTCTTTGAATGGATTTGATGGCAATTTTAGAGCCAGCCATGCTGCTTA
TGGGCCTGCAGGCTTCCAAGGTCTAAAACCTGATACAGGGGATGTAGGTTCCAGATCAGG
CCCTAAATTGGGATCAAATGTTCAGATGCCTGCAATGAGGATTGTTGGCTTTGAATCAGG
TTTTGCTAATTCCACTGGAGGTCCTGATACGATGGTAGCTGACAATACGGATTCACCTTT
AGTTATTGATAATTGCCATTCATTGATTGAACAGCATGGGCCTCATGCGAGGAAAAGGGT
GTTGTCGCCTTTGAACAATGCGCTCCCTGGACATTTCCGAGGTGATGCCCTGAATATTGG
TTCTGGTGATGCCAAAATTCAGCATTCTGATTGTGCTAGGAGACTTTATACTTCTGGCTT
TCAAGATCGTAAAAAGGCAAATACTGCAATTCTTGATTCTTTTGAGGCACCTACATGGCC
AGCTTCGAGATACTCCAACTGGAGTACAGAGCAGGGTGTCGATAAATTTAGTGGTAGTAC
ATTCACTGATGGTCCTTTGCTTGAGAGCAGGGAGTCATTTCCTTGTTCAGATCACCTGGA
AGCTCTTGAAAGTGTTGCTGTTCCACTTGCAAAATTGGCACATCCTCCTCTGCTTAATCT
GTCTCCTCTTGGCCCAACATGGATGCATGGAACAAATACTGTAGGATCTCATGGAGAATC
ATTGAGAGAAACTGAAGGTTCAACCTGTGAAGGGTATTCAGAAGGTCATGGTAGGTCAAG
GATAAGAGATGCGTTTGAAAAAACTAATATCTTACATGATGACTTTGATATGAGGATCCC
TAAGAAGAGTTCAGATAGAAAATCTCAAAACTGGGGCCCGGAATCTGCCTCTGTATCCCC
ACGCATTGGATGTATTCGGAGTATTGGTCTCCTTCCTGTACGAAGGTCGTTAATTGGCTC
TTTTGAGGAATCTCTTTTATCTGGTCGCTATTCCTGTGGAAAAGACAATCAGAATATTGA
CGGTTTCCTTGCTGTCCTGAATGTGACTGGTGGTAACTTCTCTCCCCCAACTCAGAAGCT
TCCATTTTCAGCTACCAGCATTGATGAGAACAGCTCCTTACTCTACTATTCATCGATCGA
TCTTGTGGGGAGGCTGCCTATGAGCAGTAGCAAAAGCCCAAAGCTCAAAAGAAGCCTGAG
TAATCATGATTCACGATCAGCGAAGAGTCGGTTACGTATCCCAGTTAAAGGGCGTGTGCA
GCTGGTTGTCAGTAACCCAGAGAAGACACCGCTACATACCTTCTTCTGCAACTATGATTT
GAGTGACATGCCTGCTGGAACCAAGACTTTCATGCGGCAAAAGGTCACTCTGTTCCCTGT
TTCTCCCTCTAATCAAAAGAAAGAAGGAAGCAAGGCCAATGAAACAAAGGTCGAGTCAGT
CCAGTTTGGGAGTGAACTTAGAGAATGCGGCACTCTATTTTCTGAATGCTGTAGACCAGG
GCAGAACTGCAACTTGATCGATGACTCGGAAAAGGGCGGCCGCAAGAACATGACATGTTG
CTCTATGGAGTGTGACATTAGAGAATCAAATGACTCTAGCTCTCTAGAAACTTCAGAAAA
TGGCAGTAGTACCAATGTTTGCTGTTGTCAATCAGACACATTTCCCTTAGGTGAAAAGAA
ATACTGCTGTAGATCGTCCAAGATCAATGATCCAGCTGGAGGTGCTCTTCGTTATGCTTT
GCACCTACGATTTCTGAGCCCATTTGCCAAGAAACCGTCAAGATCTATGCAGCGTAGCAA
ATCTGATGTATCATCAGAACCATACAACCATAGTTCAGGGCCTGAGGAACACAGACGATT
CTATCTCTACAATGATGTTAGAGTTGTCTTTCCTCAAAGACACTCAGATGCAGATGAAGG
CGAGCTGCGGGTCGAGCACGACTTCCCTGCTGATCCCAAGTACTTCGACATAAGCAACTG
ATATTTACTCGCGCACTTCACATGAAATCTGTATATATCATACCCTCATTAACCCGTCCA
TCAATCCCTTGTGTTCATAAACATTCACCCATTTGTATAGGACTAAAATCTTCCAATGAA
ATACCTCATTTCGTTC