Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0509200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:19753514:19758951:1 gene:Os09g0509200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 3 (EC 1.2.4.1). (Os09t0509200-01);Similar to (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta. (Os09t0509200-02)
Sequence	ATGGTATTGTGCGGTTTTTCTTTAGATGTATCGTTGTGGAGATGTAGACAGTTGACTTCA AAACTGATGACTGTCCGTGAAGCGCTGAACTCTGCACTCGATGAAGAAATGTCTGCTGAT CCTTCTGTTTTTCTGATGGGTGAAGAGGTGGGAGAGTATCAAGGTGCATACAAGATTTCA AAGGGCTTGCTTGACAAGTATGGTCCTGAGAGGGTTCTGGATACACCAATCACAGAGGCT GGGTTTACTGGCATTGCTGTTGGTGCAGCGTATCAAGGTCTTCGACCTGTTGTAGAGTTC ATGACATTCAATTTCTCAATGCAGGCAATTGATCATATCATCAATTCAGCTGCCAAGTCA AACTACATGTCAGCGGGTCAGATATCTGTCCCTATTGTTTTCAGAGGACCTAATGGAGCT GCTGCTGGAGTTGGCGCTCAACACTCGCAGTGTTATGCGGCTTGGTATGCACATGTTCCG GGTCTTAAGGTTCTGGTTCCATATTCTGCAGAAGATGCTCGTGGCTTGCTCAAAGCTGCG ATTAGGGATCCGGACCCTGTTGTTTTCTTGGAAAATGAACTGCTCTATGGAGAATCATTC CCTATTTCTGCTGAAGTGCTTGATTCTAGTTTCGCTCTGCCAATTGGCAAAGCAAAGATA GAGCGTGAGGGTAAAGATGTTACAATTACTGCATACTCCAAGATGGTTGGATATGCTCTT CAGGCCGCAGATATATTGTCCAAAGAAGGAATCAGTGCTGAGGTGATAAACCTTCGTTCA ATTAGACCACTTGATAGAGCTACTATCAATGCATCTGTTAGAAAAACAAATAGATTGGTG ACCATTGAGGAAAGCTTCCCACAGCATGGGATTGGTGCTGAGATATGCATGTCTGTTGTT GAGGAAAGCTTTGAATATCTTGATGCACCAGTTGAGAGAATTGCTGGAGCTGATGTACCC ATGCCCTATGCTGCCAATCTTGAGAGGATGGCTGTCCCACAGGTTGACGATATTGTCCGT GCAGCGAAGCGTGCGTGCTACAGAGCGGTGCCCATGGCAGCAACTGCCTGA

Peptide Sequence

PEP ID	Os09t0509200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:19753514:19758951:1 gene:Os09g0509200 transcript:Os09t0509200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 3 (EC 1.2.4.1). (Os09t0509200-01);Similar to (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta. (Os09t0509200-02)
Sequence	MVLCGFSLDVSLWRCRQLTSKLMTVREALNSALDEEMSADPSVFLMGEEVGEYQGAYKIS KGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRPVVEFMTFNFSMQAIDHIINSAAKS NYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGLKVLVPYSAEDARGLLKAA IRDPDPVVFLENELLYGESFPISAEVLDSSFALPIGKAKIEREGKDVTITAYSKMVGYAL QAADILSKEGISAEVINLRSIRPLDRATINASVRKTNRLVTIEESFPQHGIGAEICMSVV EESFEYLDAPVERIAGADVPMPYAANLERMAVPQVDDIVRAAKRACYRAVPMAATA

Transcript Sequence

Transcript ID	Os09t0509200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19753514:19758951:1 gene:Os09g0509200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 3 (EC 1.2.4.1). (Os09t0509200-01);Similar to (Rice Genome Annotation Project) pyruvate dehydrogenase E1 component subunit beta. (Os09t0509200-02)
Sequence	ATAGCACAATGGAATTAGGTTATCCCGATTGAAGAATAGAATGTTGTCATGTTTTGATGA CTGCTGATTTGTAGCCACATGTAGACTCGATGTCGGAGTGAACTGATATCTAAACTGCCT ATAGATGTGGGTCGCGTGTCCAAATTTCCCACAGACAGTCAGGCTACAGGGTTAACAGTT TGTATTGATTCATTTGGCAGTCACTATACTAGACGTGGAGATACAGTCTCTTCGGATGGT ATTGTGCGGTTTTTCTTTAGATGTATCGTTGTGGAGATGTAGACAGTTGACTTCAAAACT GATGACTGTCCGTGAAGCGCTGAACTCTGCACTCGATGAAGAAATGTCTGCTGATCCTTC TGTTTTTCTGATGGGTGAAGAGGTGGGAGAGTATCAAGGTGCATACAAGATTTCAAAGGG CTTGCTTGACAAGTATGGTCCTGAGAGGGTTCTGGATACACCAATCACAGAGGCTGGGTT TACTGGCATTGCTGTTGGTGCAGCGTATCAAGGTCTTCGACCTGTTGTAGAGTTCATGAC ATTCAATTTCTCAATGCAGGCAATTGATCATATCATCAATTCAGCTGCCAAGTCAAACTA CATGTCAGCGGGTCAGATATCTGTCCCTATTGTTTTCAGAGGACCTAATGGAGCTGCTGC TGGAGTTGGCGCTCAACACTCGCAGTGTTATGCGGCTTGGTATGCACATGTTCCGGGTCT TAAGGTTCTGGTTCCATATTCTGCAGAAGATGCTCGTGGCTTGCTCAAAGCTGCGATTAG GGATCCGGACCCTGTTGTTTTCTTGGAAAATGAACTGCTCTATGGAGAATCATTCCCTAT TTCTGCTGAAGTGCTTGATTCTAGTTTCGCTCTGCCAATTGGCAAAGCAAAGATAGAGCG TGAGGGTAAAGATGTTACAATTACTGCATACTCCAAGATGGTTGGATATGCTCTTCAGGC CGCAGATATATTGTCCAAAGAAGGAATCAGTGCTGAGGTGATAAACCTTCGTTCAATTAG ACCACTTGATAGAGCTACTATCAATGCATCTGTTAGAAAAACAAATAGATTGGTGACCAT TGAGGAAAGCTTCCCACAGCATGGGATTGGTGCTGAGATATGCATGTCTGTTGTTGAGGA AAGCTTTGAATATCTTGATGCACCAGTTGAGAGAATTGCTGGAGCTGATGTACCCATGCC CTATGCTGCCAATCTTGAGAGGATGGCTGTCCCACAGGTTGACGATATTGTCCGTGCAGC GAAGCGTGCGTGCTACAGAGCGGTGCCCATGGCAGCAACTGCCTGATAGGAGAGACCTCT TTTACATCATCTTTCTTTTCCCGTCCGGCCAACATATGATTCATAATGGTGTCCAACAAT TGCCCAAACTCAAAGCGAGCTAATTTTGCAAGATATTTCCATGACCCCCACCTATTCTTT TAGCTGCAGTTGCATCACTGCGTTCGTTGGTGGTGACCCAAATTTCCCTCTTTTTTTTTG GTGTGTATGCGAGAATTATGCAGCTTATGGTGATTGGTTCACAGTACACACTGGCGCTAG TTACATAAATGAAAGAAAAATCTGAGCTCTTGATGGAC