Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0508900-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:19728447:19735516:-1 gene:Os09g0508900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-044-E12, full insert sequence. (Os09t0508900-01)
Sequence

ATGTCGAGTGCGGCGGTGAATGGATTGGCTGGTGCCGGTGGTGGCATCATCGCCCAGATC
ATCACCTACCCCCTCCAGACTGTGAACACCCGGCAGCAGACAGAGAGGTCAGCAAAAAAG
AAGAAGGCCAATGGCGCAGCCATCGCCAATACTTCCACCCTCTTCCAGATGCTCCAGCTG
TTCCAAACAGAAGGATGGGGAGGGTTGTATAGCGGCCTTAAACCCTCTCTTATTGGCACC
GCTGCTTCACAGGGAATCTATTACTACTTTTACCAGATTCTCAAAAACAAGGTGGAAGAT
CTAGCAGTTGCTCGCGGTAAGAAGGGTCTAGGGGATGGTACTGTTGGGATGTTCTCCTGG
CTTGGTATTGCAGCTGTTGCTGGGTCAATCAATGTTCTTCTTACCAATCCAATATGGGTT
CTCGTGACTCGTATGCAGACACATACACAAGCAGAAAAGAAGATCATGGAGTCTAAAAAG
GAGCTTTTGCTGAAGGATGTTGCTAGGGCCAATTCAATAGAGGTCTCAATTCTTAAGGAC
AGGTTGTATAAACTTGATTCTGAAAAGCCTCGTCCATATGGGACAATTCAAGCGGTCCGG
GAGGTCTACCGTGAATCAGGCATAAGAGGATTCTGGAAAGGACTTATTCCAACACTAATT
ATGGTATGTAATCCATCAATTCAATTTATGATCTATGAAACATTGGCAAAGCGTCTCCGG
TCAAAGAGATCTGGAAAGGAACTCCCAAAAAAGAACCTTACTGCTATGGAGGTATTCTTA
TTAGGTGCAATAGCAAAGCTCGGAGCTACTGTTGTGACATACCCATTGCTAGTGGTTAAG
TCTAGGTTGCAAGCAAAACAAGAAATTGGCAGGAATGTGATGTCCAGATACACAGGTACG
ATTGACGCGATCATAAAGATGATCCGGTATGAAGGATTGCACGGGTTTTACAAAGGAATG
GGTACGAAGATTGTACAGAGCGTCTTTGCCGCCTCAGTTCTTTTTATGGTAAAAGAAGAG
TTGGTAAAATTCGTAGTTATGTTAATTGCTAGGAGTAGGACTGTGCTCGGTCCTAGCTCT
AAGAAACGATAG

Peptide Sequence

PEP ID

Os09t0508900-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:19728447:19735516:-1 gene:Os09g0508900 transcript:Os09t0508900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-044-E12, full insert sequence. (Os09t0508900-01)
Sequence

MSSAAVNGLAGAGGGIIAQIITYPLQTVNTRQQTERSAKKKKANGAAIANTSTLFQMLQL
FQTEGWGGLYSGLKPSLIGTAASQGIYYYFYQILKNKVEDLAVARGKKGLGDGTVGMFSW
LGIAAVAGSINVLLTNPIWVLVTRMQTHTQAEKKIMESKKELLLKDVARANSIEVSILKD
RLYKLDSEKPRPYGTIQAVREVYRESGIRGFWKGLIPTLIMVCNPSIQFMIYETLAKRLR
SKRSGKELPKKNLTAMEVFLLGAIAKLGATVVTYPLLVVKSRLQAKQEIGRNVMSRYTGT
IDAIIKMIRYEGLHGFYKGMGTKIVQSVFAASVLFMVKEELVKFVVMLIARSRTVLGPSS
KKR

Transcript Sequence

Transcript ID

Os09t0508900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19728447:19735516:-1 gene:Os09g0508900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-044-E12, full insert sequence. (Os09t0508900-01)
Sequence

TCTCCCGTTCATCCCTTCACTCACTTCCCTCCTCCTTATCCACGAAATCAGGAGGCGCGG
CGAGGGCGGCGCTCACAGCCGGCGGCGGGCGGCGGGCGGCCGCGTCGTCCCTCCTCCTTC
CACGCACCGCAACCTCGGGCAGGTTGGCGCATGTCGAGTGCGGCGGTGAATGGATTGGCT
GGTGCCGGTGGTGGCATCATCGCCCAGATCATCACCTACCCCCTCCAGACTGTGAACACC
CGGCAGCAGACAGAGAGGTCAGCAAAAAAGAAGAAGGCCAATGGCGCAGCCATCGCCAAT
ACTTCCACCCTCTTCCAGATGCTCCAGCTGTTCCAAACAGAAGGATGGGGAGGGTTGTAT
AGCGGCCTTAAACCCTCTCTTATTGGCACCGCTGCTTCACAGGGAATCTATTACTACTTT
TACCAGATTCTCAAAAACAAGGTGGAAGATCTAGCAGTTGCTCGCGGTAAGAAGGGTCTA
GGGGATGGTACTGTTGGGATGTTCTCCTGGCTTGGTATTGCAGCTGTTGCTGGGTCAATC
AATGTTCTTCTTACCAATCCAATATGGGTTCTCGTGACTCGTATGCAGACACATACACAA
GCAGAAAAGAAGATCATGGAGTCTAAAAAGGAGCTTTTGCTGAAGGATGTTGCTAGGGCC
AATTCAATAGAGGTCTCAATTCTTAAGGACAGGTTGTATAAACTTGATTCTGAAAAGCCT
CGTCCATATGGGACAATTCAAGCGGTCCGGGAGGTCTACCGTGAATCAGGCATAAGAGGA
TTCTGGAAAGGACTTATTCCAACACTAATTATGGTATGTAATCCATCAATTCAATTTATG
ATCTATGAAACATTGGCAAAGCGTCTCCGGTCAAAGAGATCTGGAAAGGAACTCCCAAAA
AAGAACCTTACTGCTATGGAGGTATTCTTATTAGGTGCAATAGCAAAGCTCGGAGCTACT
GTTGTGACATACCCATTGCTAGTGGTTAAGTCTAGGTTGCAAGCAAAACAAGAAATTGGC
AGGAATGTGATGTCCAGATACACAGGTACGATTGACGCGATCATAAAGATGATCCGGTAT
GAAGGATTGCACGGGTTTTACAAAGGAATGGGTACGAAGATTGTACAGAGCGTCTTTGCC
GCCTCAGTTCTTTTTATGGTAAAAGAAGAGTTGGTAAAATTCGTAGTTATGTTAATTGCT
AGGAGTAGGACTGTGCTCGGTCCTAGCTCTAAGAAACGATAGGCAGTTTATATATATCGA
AACAATTTGCAACGACCTCTTCGAGACTATATATCGATTATTTACAAGATAGGAAACCCA
AAATGTCTCCAAATACTAATGCTTCTCTTCT