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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0506000-03
CDS Infomation

cds chromosome:IRGSP-1.0:9:19581493:19584869:-1 gene:Os09g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 27A description:Nucleotide pyrophosphatase/phosphodiesterase (Os09t0506000-01);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-02);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-03)
Sequence

GGGGAAGATACTGCCTGGGTAACTGTTGATTTCGCAGCTCCGCATGCGAGTGACGGCGAT
TGGATCGGAGTATTCTCTCCTTCAAATTTCAACGCGTCCACATGCCCCGGTCCTTCTGGA
TCAGACTCAGGACCTGTTATATGCTCTGCACCAATAAAGTATCAGCTTGCAAATTATTCT
TCAGATTATGGCAAGACAGGAAAAGGCACTCTCAAGTTTCAGTTGATCAATCAGAGGCAG
GACTTCTCCTTTGCACTGTTCACTGGTGGTCTCTCAAATCCAAAGCTTATCGCAGTATCA
AATAAGATCGCCTTCGCAAACCCGAAAGCTCCGGTTTACCCTCGTCTAGCTCAAGGCAAA
TCCTGGAATGAGATGACTGTCACATGGACTAGTGGTTATGACATCAAAGAGGCATATCCC
TTTGTTGAATGGGGCATGAAATGGAGCCCTCCTACGCGCACAGCAGCTGGCACCGTCACT
TTTGATCGCGAAAGCTTATGCGGAGAACCTGCCCGTACTGTTGGTTGGAGAGATCCAGGT
TTCATACACACAGCATTCCTGACTGATTTATGGCCAAATAAAGAATACTATTACAAGATT
GGACATATGCTACCTGATGGAAAAATTGTATGGGGCAAATTTTACTCCTTCAAAGCACCT
CCTTTTCCTGGGCAAAAGTCACTGCAGAGGGTTGTCATTTTTGGTGATATGGGAAAGGCC
GAGAGGGATGGAAGCAACGAGTACAGCAACTACCAGCCTGGATCACTGAACACAACTGAC
ACACTGATCAAGGACCTTGACAACATCGACATTGTATTTCACATCGGTGACATTACCTAT
GCCAACGGGTACATTTCCCAGTGGGATCAGTTCACTCAGCAAGTCGAGCCGATCACTGCT
CGAGTCCCCTACATGATTGCAAGTGGAAACCATGAACGGGATTGGCCAAACAGTGGATCT
TTCTTCAATGGGACAGATTCTGGAGGGGAGTGTGGGGTGCTTGCTGAGACCATGTACTAC
ACACCCACAGAGAACAGGGCAAACTACTGGTACAAGACGGACTACGGGATGTTCAGATTC
TGCGTGGCGGACAGCGAGCACGACTGGCGGGAAGGCACGGAGCAGTACGCGTTCATCGAG
AGCTGCCTCGCCACGGTGGACCGGAAGAAGCAGCCATGGCTGGTGTTCATCGCGCACCGC
GTCCTCGGCTACTCCTCGGGCTTCTTCTACGGCGCCGGCGGCGCCTTCGCGGAGCCGACG
GCAAGGCAGAGCCTCCAGAGGCTATGGCAGCGGCACCGCGTCGACCTCGCCTTCTACGGC
CACGTCCACAACTACGAGCGGACGTGCCCGGTCTACGACGGGCGGTGCGCGTCGCCGGAG
AGGTCGCGCTACTCCGGCGCGGTGGGCGGCACCATCCACGCGGTGGTCGGCGGCGGCGGC
AGCCACCTGAGCAACTTCACCGCCGAGGCGCCGCCGTGGAGCGTGTACAGGGAGATGGAC
TACGGCTTCGTCAAGCTCACGGCGTTCAACTACACGTCGCTGCTCTACGAGTACAGGCGG
TCCAGCGACGGCGAGGTGCACGACAGCTTCACCGTCCACCGGGAGTACCGCGACGTGCTC
GCCTGCGTCGCCGACAGCTGCCCGCCGACCATCCCGCCGGCGACGTGA

Peptide Sequence

PEP ID

Os09t0506000-03
PEP Infomation

pep chromosome:IRGSP-1.0:9:19581493:19584869:-1 gene:Os09g0506000 transcript:Os09t0506000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 27A description:Nucleotide pyrophosphatase/phosphodiesterase (Os09t0506000-01);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-02);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-03)
Sequence

GEDTAWVTVDFAAPHASDGDWIGVFSPSNFNASTCPGPSGSDSGPVICSAPIKYQLANYS
SDYGKTGKGTLKFQLINQRQDFSFALFTGGLSNPKLIAVSNKIAFANPKAPVYPRLAQGK
SWNEMTVTWTSGYDIKEAYPFVEWGMKWSPPTRTAAGTVTFDRESLCGEPARTVGWRDPG
FIHTAFLTDLWPNKEYYYKIGHMLPDGKIVWGKFYSFKAPPFPGQKSLQRVVIFGDMGKA
ERDGSNEYSNYQPGSLNTTDTLIKDLDNIDIVFHIGDITYANGYISQWDQFTQQVEPITA
RVPYMIASGNHERDWPNSGSFFNGTDSGGECGVLAETMYYTPTENRANYWYKTDYGMFRF
CVADSEHDWREGTEQYAFIESCLATVDRKKQPWLVFIAHRVLGYSSGFFYGAGGAFAEPT
ARQSLQRLWQRHRVDLAFYGHVHNYERTCPVYDGRCASPERSRYSGAVGGTIHAVVGGGG
SHLSNFTAEAPPWSVYREMDYGFVKLTAFNYTSLLYEYRRSSDGEVHDSFTVHREYRDVL
ACVADSCPPTIPPAT

Transcript Sequence

Transcript ID

Os09t0506000-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19581493:19584869:-1 gene:Os09g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 27A description:Nucleotide pyrophosphatase/phosphodiesterase (Os09t0506000-01);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-02);Similar to Nucleotide pyrophosphatase/phosphodiesterase. (Os09t0506000-03)
Sequence

AGGGGGAAGATACTGCCTGGGTAACTGTTGATTTCGCAGCTCCGCATGCGAGTGACGGCG
ATTGGATCGGAGTATTCTCTCCTTCAAATTTCAACGCGTCCACATGCCCCGGTCCTTCTG
GATCAGACTCAGGACCTGTTATATGCTCTGCACCAATAAAGTATCAGCTTGCAAATTATT
CTTCAGATTATGGCAAGACAGGAAAAGGCACTCTCAAGTTTCAGTTGATCAATCAGAGGC
AGGACTTCTCCTTTGCACTGTTCACTGGTGGTCTCTCAAATCCAAAGCTTATCGCAGTAT
CAAATAAGATCGCCTTCGCAAACCCGAAAGCTCCGGTTTACCCTCGTCTAGCTCAAGGCA
AATCCTGGAATGAGATGACTGTCACATGGACTAGTGGTTATGACATCAAAGAGGCATATC
CCTTTGTTGAATGGGGCATGAAATGGAGCCCTCCTACGCGCACAGCAGCTGGCACCGTCA
CTTTTGATCGCGAAAGCTTATGCGGAGAACCTGCCCGTACTGTTGGTTGGAGAGATCCAG
GTTTCATACACACAGCATTCCTGACTGATTTATGGCCAAATAAAGAATACTATTACAAGA
TTGGACATATGCTACCTGATGGAAAAATTGTATGGGGCAAATTTTACTCCTTCAAAGCAC
CTCCTTTTCCTGGGCAAAAGTCACTGCAGAGGGTTGTCATTTTTGGTGATATGGGAAAGG
CCGAGAGGGATGGAAGCAACGAGTACAGCAACTACCAGCCTGGATCACTGAACACAACTG
ACACACTGATCAAGGACCTTGACAACATCGACATTGTATTTCACATCGGTGACATTACCT
ATGCCAACGGGTACATTTCCCAGTGGGATCAGTTCACTCAGCAAGTCGAGCCGATCACTG
CTCGAGTCCCCTACATGATTGCAAGTGGAAACCATGAACGGGATTGGCCAAACAGTGGAT
CTTTCTTCAATGGGACAGATTCTGGAGGGGAGTGTGGGGTGCTTGCTGAGACCATGTACT
ACACACCCACAGAGAACAGGGCAAACTACTGGTACAAGACGGACTACGGGATGTTCAGAT
TCTGCGTGGCGGACAGCGAGCACGACTGGCGGGAAGGCACGGAGCAGTACGCGTTCATCG
AGAGCTGCCTCGCCACGGTGGACCGGAAGAAGCAGCCATGGCTGGTGTTCATCGCGCACC
GCGTCCTCGGCTACTCCTCGGGCTTCTTCTACGGCGCCGGCGGCGCCTTCGCGGAGCCGA
CGGCAAGGCAGAGCCTCCAGAGGCTATGGCAGCGGCACCGCGTCGACCTCGCCTTCTACG
GCCACGTCCACAACTACGAGCGGACGTGCCCGGTCTACGACGGGCGGTGCGCGTCGCCGG
AGAGGTCGCGCTACTCCGGCGCGGTGGGCGGCACCATCCACGCGGTGGTCGGCGGCGGCG
GCAGCCACCTGAGCAACTTCACCGCCGAGGCGCCGCCGTGGAGCGTGTACAGGGAGATGG
ACTACGGCTTCGTCAAGCTCACGGCGTTCAACTACACGTCGCTGCTCTACGAGTACAGGC
GGTCCAGCGACGGCGAGGTGCACGACAGCTTCACCGTCCACCGGGAGTACCGCGACGTGC
TCGCCTGCGTCGCCGACAGCTGCCCGCCGACCATCCCGCCGGCGACGTGATCCAGCTCCG
GTGATTCCGCCGGCGAGTCTGCCGGCGACGTGTGCACTATTGCTGCTTGGTGGTGCTTGC
GGGCCTCGTCTGTAATCTTGACTTGTCAATCGTGTGTAAATTGAATTGCGAAATATTTCG
AAATTAAGTCAAATAAAGAAATGTT