Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0505700-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:19566193:19568821:1 gene:Os09g0505700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel domain containing protein. (Os09t0505700-01);Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5- phosphate 3-epimerase) (PPE). (Os09t0505700-02)
Sequence	ATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACTTCGCCAAC CTCGCCGCGGAGGCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACATGGACATC ATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGAGCTTGAGG AAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGGATTATGTA GAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTATCCAGAGAC AATTGGCAAGAACTCATCCAAAGTATCAAAGCAAAGGGTATGCGACCGGGTGTATCATTG AGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGGTGGAGGCAGAAAATCCTGTTGAA TTGGTTCTTGTTATGACAGTTGAACCTGGCTTTGGTGGTCAGAAGTTTATGCCAGAAATG ATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGGTTGATGGT GGTCTGGGTCCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCATTGTCGCT GGAAGCTCAATATTTGGAGCAGCTGAACCAGGAGAGGTCATATCGGCACTAAGGAAGAGC GTTGAAGGATCTCAGAACAAAAGCTGA

Peptide Sequence

PEP ID	Os09t0505700-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:19566193:19568821:1 gene:Os09g0505700 transcript:Os09t0505700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel domain containing protein. (Os09t0505700-01);Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5- phosphate 3-epimerase) (PPE). (Os09t0505700-02)
Sequence	MAAAAAAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLR KHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSL RPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDG GLGPSTIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQNKS

Transcript Sequence

Transcript ID	Os09t0505700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19566193:19568821:1 gene:Os09g0505700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldolase-type TIM barrel domain containing protein. (Os09t0505700-01);Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5- phosphate 3-epimerase) (PPE). (Os09t0505700-02)
Sequence	GCCGCCCCCCAAACACACCACCACCCAACACTATCGGAATTGGTTCGGGAGCAGGTCAAG CAGGAGGCATGGCGGCGGCGGCGGCGGCGAAGATAGCGCCGTCGATGCTCTCGTCGGACT TCGCCAACCTCGCCGCGGAGGCCGACCGCATGGTCCGCCTCGGCGCCGACTGGCTCCACA TGGACATCATGGACGGGCACTTTGTTCCTAATCTTACTATTGGAGCTCCAGTGATTCAGA GCTTGAGGAAGCACACCAAGGCATATTTGGACTGCCATCTTATGGTGACCAATCCTTCGG ATTATGTAGAACCATTAGCAAAAGCTGGTGCCTCAGGTTTCACATTCCATATAGAAGTAT CCAGAGACAATTGGCAAGAACTCATCCAAAGTATCAAAGCAAAGGGTATGCGACCGGGTG TATCATTGAGGCCAGGCACTCCTGTGGAGGAAGTTTTTCCCCTGGTGGAGGCAGAAAATC CTGTTGAATTGGTTCTTGTTATGACAGTTGAACCTGGCTTTGGTGGTCAGAAGTTTATGC CAGAAATGATGGAAAAGGTGCGTGCCCTGAGAAAGAAGTACCCATCCCTTGACATCGAGG TTGATGGTGGTCTGGGTCCTTCCACCATTGATGTGGCTGCATCTGCTGGGGCTAACTGCA TTGTCGCTGGAAGCTCAATATTTGGAGCAGCTGAACCAGGAGAGGTCATATCGGCACTAA GGAAGAGCGTTGAAGGATCTCAGAACAAAAGCTGATCTGTGGTTTTGTACTCGGTTTCTA TTGTAAACTAGGGCCACTCTGCACGTCTTCTTTACAGAGATCCCCAGATTGCACTACGTG AGCTGTTGAGAGATAATAAAATGTGCCCTTGGCAGTTGGCACTGATTCCAGTGTTACTAA ATGTTAAAACTCTTGGGTCCGTTTTTGATGGACAAGTCACAAGTAAAGCTTAATGATACT TT