Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0505600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19562287:19565726:1 gene:Os09g0505600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-6 subunit of 20 S proteasome, 20 S proteasome beta-6 subunit, 20S proteasome beta6 subunit description:Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os09t0505600-01)
Sequence	ATGTCGAGGCGCGGCGACTGGGTCTACGAGAACAACGGCGGGACGTGCGTGGCCATCGCC GGCGCGGACTACTGCGTGGTGGCCGCCGATACCCGCCTTTCCGTCGGATACAACATCCTC ACGCGCGACCACTCCAAGATCTGCGAGCTAGCGGACAAATGCGCACTAGCATCTTCCGGC TTCCAAGGTGATATCAAAGCTCTGCACAAGAACTTGGCTGCCAGAGAATTGCTGTACCAG CACCAGCACAATAAAAGGATGAGCTGCCCTGCCATGGCACAACTGCTCTCCAACACTCTG TACTACAAGCGATTCTTCCCATATTATGCTTTCAATGTACTTGGTGGGCTTGATAGTGAA GGGAAAGGATGTGTTTTCACCTATGATGCAGTTGGGTCCTATGAGAGGACTGGCTACAGT GCACAGGGAACAGGATCTGCTTTGATCATGCCAGTGCTGGACAACCAACTAAAATCACCT AGTCCACTATTACTCCCTGCAAGAGATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTC GATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTGGTGATAAG CTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAGTACATCGACCTGAGGAAG GACTAG

Peptide Sequence

PEP ID	Os09t0505600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19562287:19565726:1 gene:Os09g0505600 transcript:Os09t0505600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-6 subunit of 20 S proteasome, 20 S proteasome beta-6 subunit, 20S proteasome beta6 subunit description:Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os09t0505600-01)
Sequence	MSRRGDWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG FQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE GKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAV DLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD

Transcript Sequence

Transcript ID	Os09t0505600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19562287:19565726:1 gene:Os09g0505600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:beta-6 subunit of 20 S proteasome, 20 S proteasome beta-6 subunit, 20S proteasome beta6 subunit description:Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os09t0505600-01)
Sequence	ATACTCTCTCTCCTCCTCCTCCTCCACTCCGGCGACTCCTCCGCCGCATCCCGAGCAAGC AAGCCGCCGCCGCCGACGACCTAGCTCCCCGATCGCGGCCATGTCGAGGCGCGGCGACTG GGTCTACGAGAACAACGGCGGGACGTGCGTGGCCATCGCCGGCGCGGACTACTGCGTGGT GGCCGCCGATACCCGCCTTTCCGTCGGATACAACATCCTCACGCGCGACCACTCCAAGAT CTGCGAGCTAGCGGACAAATGCGCACTAGCATCTTCCGGCTTCCAAGGTGATATCAAAGC TCTGCACAAGAACTTGGCTGCCAGAGAATTGCTGTACCAGCACCAGCACAATAAAAGGAT GAGCTGCCCTGCCATGGCACAACTGCTCTCCAACACTCTGTACTACAAGCGATTCTTCCC ATATTATGCTTTCAATGTACTTGGTGGGCTTGATAGTGAAGGGAAAGGATGTGTTTTCAC CTATGATGCAGTTGGGTCCTATGAGAGGACTGGCTACAGTGCACAGGGAACAGGATCTGC TTTGATCATGCCAGTGCTGGACAACCAACTAAAATCACCTAGTCCACTATTACTCCCTGC AAGAGATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTT TGCATCGGCAACTGAGAGGGACATCTACACTGGTGATAAGCTGGAGATAGTTGTCATCAA CAAAGCTGGGACGAAGCGAGAGTACATCGACCTGAGGAAGGACTAGATCGACGATTATGT TCTTCAGTTACCGCAAATTTGCATCAACAAATTTGCTTCGAACATTCTCCCTGATACGCC AGGGAATCATGCCCTGAACTTGATAGAAACGCCTGTGCTTTCTTGCTTCTATTCTGTACC AGGATTCTCCCAACCTGCTTTGTTGAACTAATCGCTGCCTTGATGCAAATGAGACCGAAC ATATTTATTGTCAGAAATATCACAATGGTCGATATGTTGAACTGTGCTTGTGTTTGCTCG ATATTCGATATGTTTATTG