Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0505100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19522173:19527787:-1 gene:Os09g0505100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0505100-01)
Sequence	ATGGGGAAGAGGGTGAAGGCGAAGGCCAAGAATCCGAGGAAAGCACAGCAACAACAGGAG CCGACGGCAGCGGCGCCCTCTGATGCTGGATCTGGGGATGCGGCGGCGGCGGCGGCGCAG GACTCGGGGAATTCGACGGAGGAAGCTGCTGCTGCTGCTGCTGCTGCCGCGTCGGCCAGC GGCAGGGAGCAGTGCGGACACTACGGCGGCGACAGCGCCCGCTTGGACAAGGTCCTCTTG GAGATCATGACGTCCAAGCATTTCGCGTCGTGCGAGCATTGCCGGGATGATGCCCCTAGG AAGAAAGGGGGTGGCAAGGAGAAAGGGGGTAAGCAGCAGCAGAAGAAGAAAGGAGGTGGA ACGAAAGGTTCCGCGGCCAAGGCGAAGGTGGAGAAGAGTGACATGTGGGTGTGCTTGGAC TGCGGTCGGCATTTCTGCGGGGGTGAGGTTGATGTGACCAAGCCGTACGGCCATGCCCGA AGGCATGCCAAGCAGGACCGGCATTGGTGGGCTGCACGGTTTGATGATCCGACTGTTGCG TTTTGTTTGTCGTGTGAGAAGGAGGTGTCGATCGAGATGCCTAGAATAGAGACAGTTGCC GCAGTGCCAACAGAGGTGGCTGGTGCAGCTGACAGAGATCTAGGTTTGGTTAACTCTCAT GGTAGTGTAATCAGAGGGCTGCCAAATCTTGGGAACACATGCTTCTTCAATGCAGTGATG CAGAGCCTCCTCGCGCTTGATAGGTTGCGCAGTAAGATGTTGGGACCAGATGTTCCAACG GGGGCTCTTTTGATGTCATTGAAGAAACTCTTCATGGAGACAAGTGCTTCAAATGATGTA GGAGGTGCGCTGAGTCCAAAGAATCTCTTCTCAAATATTTGCTCAAAGTACCCGCAGTTC AGGGGCTTCCAGATGCAGGACAGCCATGAATTACTCCGCTGTTTTCTTGATGGTCTGCAC ACGGAGGAAAATGAAGCACGGAAGCTAGCGGATGAAGCTTCAAGTGCAACCATTCCTACA ATTGTCGATTCCATCTTTGGGGGTCAGCTGTCTAGTACAGTGTCCAGCACAGAATGCACA CACAGTTCTGTTAAACATGACCAATTCCTTGATCTGTCACTACCAGTTCCATCCAGGAGG CCTCCAGCCAAGAGTGTGTCATCACCACCAGCAAAGAGGAACAAACAATCCCTAAGAGAT AGGAATAAAAATCGGAGATATGGGAAGATTTCGACCCGAGTGACTCCTACAATAGAGGTG AGCAACAAAGAAAAGATTCAAACAGTTGCTGAAGGCAATAATTCCCTGATTCCTGGTTCA GAGTCAGGACAGGTTGTCAGTGAGAAAGAGCCTGAGCCTTCTGAATGCAGTGAGTCATGT GCTTCTGTGCCTAATCTAGAACAAACAGGTACTTCAAATGTGGAGGATGGCACTTGCTGG TTGGATTACATTGATGATGCAGATGAAGCAAAATCAGAGATTCTTGATTCTGCAGATTCT ATTGAAGCGGGACAGATCTGGGAAGACAAGGGTGTTACTTATGGTCCATTTCTTCCACAG GATGATGCCTTATCGAAAGAGCAGGTCTTGGGTTCTGAACACTCTGGTGAAAACCCTATT GATGATGCAACATCTTCACAGCCTGTTATCTTGCTTCCTTACAAAGAATTTGGTTCCACT GCCAATGAAATGGATGGAACCACAGAAAATTCACAGAAACCAGAAGATGCAGTTGCTCCT CCAGCTGTTTCTCCCTTGCCAGAAGATAATGCACAACCTGCATCTGTTGGCGATGGGGAT CAAGATGACTATGTTGGTCTTGGTGATATGTTCAATGAGCCTGAAGTTACTTCTGAAGTC AAGAAAGAAATAGGTACAGTTGAAGATATTGATGTGATGGCCTGGAGTAGCAACAGTGCT GAAGACGAGGTGGATGATAGTAATGCTCCCGTATCAGTTGAGGGCTGCTTGGCTTTGTTT ACTGAACCGGAGTTGCTCTCTGAACCATGGCACTGTGAGCTCTGCTCTGACTCTATTGCA TGCCCAAACACCAATGATGGCAAAGATGATGAGATGGCGACTAGTGTCAATGAAAGAAAG GATGGTGAGGAGATGATGGCAGGTGGTGATGAAACACAAGACGGTGATAAGTTGATCGCT AACTGCACCGAAAAGGAGGGCATTGATCAGATTATGGCAACTGACGGTTGCTCAGATAAT TTAAATAGTGATATGAACAGTAAAGAAGGTGGTTGTGCAAATTCTTCTTTGGTTGGTGCT GACAACTCAGTTGATGCTAACTTTCCAGAAAATGGGAAAGTTGCTTTACTGAAAACAGGT TCGTCACTTGTTGACACAACTGAACAGGCAGACAGCAAAGCATATCGTCGAGAGATTAGG GATTTGAACAACTCAGCAGTGGAATATACATCTTCGAGTAAGCAACCTCATGATTCTGCC CAGCATAAGGATGAACATAATGTGGATGTAGCCTCTGAAGAAACAACTGCACCAGAGTGT TCTTGTGACAACGAATCTGCCTCTTGCAGCACAACCAATAAGAATGAAGCTGAATGTGGT GTTGGTGCTGAAGAAATTGTTACTAGTAGCCTTCCATCTGAGACGCAAAGAATCTTACCA GGTGAAAAAGACAATGAAGATGTTGTCACGCGGAATCATGGCAGAAGGAAGCGAATGAAG ATGGTTGGCAAGGCACATCAAGGGCAAGATAACCAAAATGAACAGAAAGAGAATGGAAAA AAGGTTTTCAGATCTGCAATGAGAAGGATCCTTATTAGCAAGGCGCCACCTGTATTGACA ATTAATTTGAACAGATTCAGTCAGGACTCGCATGGTCGGTTCAAGAAATTGAAAGGGCAT GTGCACTTTAAGGAGACACTTGATGTGCGGCCATTCATGGACCCAAGGTCTAAGGAGAAT GACAATACAACTTATCGTCTCGTTGGCGTTGTTGAGCACTTGGGAACCATGGCAGCTGGG CATTATGTTGCATATGTGAGAACTGGCAAGATTGGGGGTCGGCAGCAGAGGAGCACCGGC TCCAAGTCATGGTTTTATGCAAGTGATGCACAAGTCAGAGAAGCCTCTCTGGAGGAAGTT CTTAACTGCGAGGCTTACATACTGTTTTACGAAAGGGTGGGAGACTAA

Peptide Sequence

PEP ID	Os09t0505100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19522173:19527787:-1 gene:Os09g0505100 transcript:Os09t0505100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0505100-01)
Sequence	MGKRVKAKAKNPRKAQQQQEPTAAAPSDAGSGDAAAAAAQDSGNSTEEAAAAAAAAASAS GREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKKGGGKEKGGKQQQKKKGGG TKGSAAKAKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVA FCLSCEKEVSIEMPRIETVAAVPTEVAGAADRDLGLVNSHGSVIRGLPNLGNTCFFNAVM QSLLALDRLRSKMLGPDVPTGALLMSLKKLFMETSASNDVGGALSPKNLFSNICSKYPQF RGFQMQDSHELLRCFLDGLHTEENEARKLADEASSATIPTIVDSIFGGQLSSTVSSTECT HSSVKHDQFLDLSLPVPSRRPPAKSVSSPPAKRNKQSLRDRNKNRRYGKISTRVTPTIEV SNKEKIQTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCW LDYIDDADEAKSEILDSADSIEAGQIWEDKGVTYGPFLPQDDALSKEQVLGSEHSGENPI DDATSSQPVILLPYKEFGSTANEMDGTTENSQKPEDAVAPPAVSPLPEDNAQPASVGDGD QDDYVGLGDMFNEPEVTSEVKKEIGTVEDIDVMAWSSNSAEDEVDDSNAPVSVEGCLALF TEPELLSEPWHCELCSDSIACPNTNDGKDDEMATSVNERKDGEEMMAGGDETQDGDKLIA NCTEKEGIDQIMATDGCSDNLNSDMNSKEGGCANSSLVGADNSVDANFPENGKVALLKTG SSLVDTTEQADSKAYRREIRDLNNSAVEYTSSSKQPHDSAQHKDEHNVDVASEETTAPEC SCDNESASCSTTNKNEAECGVGAEEIVTSSLPSETQRILPGEKDNEDVVTRNHGRRKRMK MVGKAHQGQDNQNEQKENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGH VHFKETLDVRPFMDPRSKENDNTTYRLVGVVEHLGTMAAGHYVAYVRTGKIGGRQQRSTG SKSWFYASDAQVREASLEEVLNCEAYILFYERVGD

Transcript Sequence

Transcript ID	Os09t0505100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19522173:19527787:-1 gene:Os09g0505100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. (Os09t0505100-01)
Sequence	GGATAAAATAAAATAAAAATAAAAACTTATTTTTTTTCCTCCCCCACTCTCCCCGACCTC CACCCTCTGCCACCCCGGCCGCCTCACCGCCGCGCCGTCCTCCTGCACGGCGGCGCCGCC GCCGCCAAAGCTGAGCCTGCTCTCTTGCCGACCGGCGCCCAACTCCCAGCCTCGGCCTCC ACCCTTCCGATTCTTGCGTCTCGGCATCGGAAGCGATGGGGAAGAGGGTGAAGGCGAAGG CCAAGAATCCGAGGAAAGCACAGCAACAACAGGAGCCGACGGCAGCGGCGCCCTCTGATG CTGGATCTGGGGATGCGGCGGCGGCGGCGGCGCAGGACTCGGGGAATTCGACGGAGGAAG CTGCTGCTGCTGCTGCTGCTGCCGCGTCGGCCAGCGGCAGGGAGCAGTGCGGACACTACG GCGGCGACAGCGCCCGCTTGGACAAGGTCCTCTTGGAGATCATGACGTCCAAGCATTTCG CGTCGTGCGAGCATTGCCGGGATGATGCCCCTAGGAAGAAAGGGGGTGGCAAGGAGAAAG GGGGTAAGCAGCAGCAGAAGAAGAAAGGAGGTGGAACGAAAGGTTCCGCGGCCAAGGCGA AGGTGGAGAAGAGTGACATGTGGGTGTGCTTGGACTGCGGTCGGCATTTCTGCGGGGGTG AGGTTGATGTGACCAAGCCGTACGGCCATGCCCGAAGGCATGCCAAGCAGGACCGGCATT GGTGGGCTGCACGGTTTGATGATCCGACTGTTGCGTTTTGTTTGTCGTGTGAGAAGGAGG TGTCGATCGAGATGCCTAGAATAGAGACAGTTGCCGCAGTGCCAACAGAGGTGGCTGGTG CAGCTGACAGAGATCTAGGTTTGGTTAACTCTCATGGTAGTGTAATCAGAGGGCTGCCAA ATCTTGGGAACACATGCTTCTTCAATGCAGTGATGCAGAGCCTCCTCGCGCTTGATAGGT TGCGCAGTAAGATGTTGGGACCAGATGTTCCAACGGGGGCTCTTTTGATGTCATTGAAGA AACTCTTCATGGAGACAAGTGCTTCAAATGATGTAGGAGGTGCGCTGAGTCCAAAGAATC TCTTCTCAAATATTTGCTCAAAGTACCCGCAGTTCAGGGGCTTCCAGATGCAGGACAGCC ATGAATTACTCCGCTGTTTTCTTGATGGTCTGCACACGGAGGAAAATGAAGCACGGAAGC TAGCGGATGAAGCTTCAAGTGCAACCATTCCTACAATTGTCGATTCCATCTTTGGGGGTC AGCTGTCTAGTACAGTGTCCAGCACAGAATGCACACACAGTTCTGTTAAACATGACCAAT TCCTTGATCTGTCACTACCAGTTCCATCCAGGAGGCCTCCAGCCAAGAGTGTGTCATCAC CACCAGCAAAGAGGAACAAACAATCCCTAAGAGATAGGAATAAAAATCGGAGATATGGGA AGATTTCGACCCGAGTGACTCCTACAATAGAGGTGAGCAACAAAGAAAAGATTCAAACAG TTGCTGAAGGCAATAATTCCCTGATTCCTGGTTCAGAGTCAGGACAGGTTGTCAGTGAGA AAGAGCCTGAGCCTTCTGAATGCAGTGAGTCATGTGCTTCTGTGCCTAATCTAGAACAAA CAGGTACTTCAAATGTGGAGGATGGCACTTGCTGGTTGGATTACATTGATGATGCAGATG AAGCAAAATCAGAGATTCTTGATTCTGCAGATTCTATTGAAGCGGGACAGATCTGGGAAG ACAAGGGTGTTACTTATGGTCCATTTCTTCCACAGGATGATGCCTTATCGAAAGAGCAGG TCTTGGGTTCTGAACACTCTGGTGAAAACCCTATTGATGATGCAACATCTTCACAGCCTG TTATCTTGCTTCCTTACAAAGAATTTGGTTCCACTGCCAATGAAATGGATGGAACCACAG AAAATTCACAGAAACCAGAAGATGCAGTTGCTCCTCCAGCTGTTTCTCCCTTGCCAGAAG ATAATGCACAACCTGCATCTGTTGGCGATGGGGATCAAGATGACTATGTTGGTCTTGGTG ATATGTTCAATGAGCCTGAAGTTACTTCTGAAGTCAAGAAAGAAATAGGTACAGTTGAAG ATATTGATGTGATGGCCTGGAGTAGCAACAGTGCTGAAGACGAGGTGGATGATAGTAATG CTCCCGTATCAGTTGAGGGCTGCTTGGCTTTGTTTACTGAACCGGAGTTGCTCTCTGAAC CATGGCACTGTGAGCTCTGCTCTGACTCTATTGCATGCCCAAACACCAATGATGGCAAAG ATGATGAGATGGCGACTAGTGTCAATGAAAGAAAGGATGGTGAGGAGATGATGGCAGGTG GTGATGAAACACAAGACGGTGATAAGTTGATCGCTAACTGCACCGAAAAGGAGGGCATTG ATCAGATTATGGCAACTGACGGTTGCTCAGATAATTTAAATAGTGATATGAACAGTAAAG AAGGTGGTTGTGCAAATTCTTCTTTGGTTGGTGCTGACAACTCAGTTGATGCTAACTTTC CAGAAAATGGGAAAGTTGCTTTACTGAAAACAGGTTCGTCACTTGTTGACACAACTGAAC AGGCAGACAGCAAAGCATATCGTCGAGAGATTAGGGATTTGAACAACTCAGCAGTGGAAT ATACATCTTCGAGTAAGCAACCTCATGATTCTGCCCAGCATAAGGATGAACATAATGTGG ATGTAGCCTCTGAAGAAACAACTGCACCAGAGTGTTCTTGTGACAACGAATCTGCCTCTT GCAGCACAACCAATAAGAATGAAGCTGAATGTGGTGTTGGTGCTGAAGAAATTGTTACTA GTAGCCTTCCATCTGAGACGCAAAGAATCTTACCAGGTGAAAAAGACAATGAAGATGTTG TCACGCGGAATCATGGCAGAAGGAAGCGAATGAAGATGGTTGGCAAGGCACATCAAGGGC AAGATAACCAAAATGAACAGAAAGAGAATGGAAAAAAGGTTTTCAGATCTGCAATGAGAA GGATCCTTATTAGCAAGGCGCCACCTGTATTGACAATTAATTTGAACAGATTCAGTCAGG ACTCGCATGGTCGGTTCAAGAAATTGAAAGGGCATGTGCACTTTAAGGAGACACTTGATG TGCGGCCATTCATGGACCCAAGGTCTAAGGAGAATGACAATACAACTTATCGTCTCGTTG GCGTTGTTGAGCACTTGGGAACCATGGCAGCTGGGCATTATGTTGCATATGTGAGAACTG GCAAGATTGGGGGTCGGCAGCAGAGGAGCACCGGCTCCAAGTCATGGTTTTATGCAAGTG ATGCACAAGTCAGAGAAGCCTCTCTGGAGGAAGTTCTTAACTGCGAGGCTTACATACTGT TTTACGAAAGGGTGGGAGACTAAGAAAATTATGTCTGCCATCCAGCAACATCAATCAGTC TCTATCAGGGCATGTTCAAATGGCAAGCAATAGATAAGAAACGTCATTTTTTGGAAAATC AGAGGCTCAGTTAGTCTTCATACTAATTACTATCCATCAAGTCCATTTTGTTTCTTTGAT TGAGTCCAGTTGGCCTTGTTACCATTTGTCTACTCAGTCAAAGAGATTTTTCACAAGTGG ACTTGAGCAGTTAATCTGTTCATACTGCCTACAGCCTTTTTGTCTTTTGAAGCATATTTT GGAGGTGTGCAAATGTTCAGAATTGGCGAGCTGCTCATACATATCTTGGCAAGGGCTCTG TGGAGAAGCCCATAGATATTGTTTTACAACCAAACAAACAATGTTCACCTTAGTACTACA TATTTTTTGATTATTATGTCTCCAGTCTCCACCCCTAAATTTTGAGTGATGGGGGTGTAT ACTGTAACGTGCCTTAGGTCCATTTAAAAGTGGTAATTACATACTTTTACC