Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0505000-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:19519267:19520097:-1 gene:Os09g0505000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0505000-00)
Sequence

ATGGAGGCGCGGGCGATGCCGCCGCCGACGCGGACGCGGCGAGGCGTCACGCTCGCCGAG
CAGATGGCCGCGTCGTCCAACCTCCGCGACCTCCTCAAGCTCCGCGACAACGACGACGAC
GACGACGACGGCGGCGGGCAAGGTGGTCGCCGCCAGCCGCGGCCGCTGCCCGACGCGGTG
GTGGTGGCGGCGGGGCGGCGACGCACGCTGCTCGACGTCATCCGCGGCGTCGACGACGAC
GATGGCCACGACCACCCGCCCACCGGCGTCCTTGAGGGACACCGCCCCGCGACGTCGACG
AGGACGGCGGCGGCGGGGGGAGCGCGGGGCGGGAGGGTGTCGCTGATGGCGCTGCTGGAG
CAGGCGGAGCGGCAGTGGACGACGGCCGCCGCCGGGGACGCCAGCCGGAGGCGCGTCGCG
GACGACCACGCGGCGGCGGCGGAGGCGGGCACGAACAAGGGCTTCGCCGGCGCCGCCGCC
GGCGTGGGAGGGCGGTGCTGCGTGTGCATGGCGCGCGGCAAGGCCGCGGCGTTCATCCCC
TGCGGCCACACCTTCTGCCGCGCCTGCGCCCGCGAGCTCCGAGTCGGCCGCGGCCGCTGC
CCGCTCTGCAACGCCGCCATCCACGACGTCCTCAACCTCTTCTGA

Peptide Sequence

PEP ID

Os09t0505000-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:19519267:19520097:-1 gene:Os09g0505000 transcript:Os09t0505000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0505000-00)
Sequence

MEARAMPPPTRTRRGVTLAEQMAASSNLRDLLKLRDNDDDDDDGGGQGGRRQPRPLPDAV
VVAAGRRRTLLDVIRGVDDDDGHDHPPTGVLEGHRPATSTRTAAAGGARGGRVSLMALLE
QAERQWTTAAAGDASRRRVADDHAAAAEAGTNKGFAGAAAGVGGRCCVCMARGKAAAFIP
CGHTFCRACARELRVGRGRCPLCNAAIHDVLNLF

Transcript Sequence

Transcript ID

Os09t0505000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19519267:19520097:-1 gene:Os09g0505000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0505000-00)
Sequence

AAATAGGCGTAGGCTTCTGCTTCTCCTTCTCCTTCTCCAGGTGAGTGAGGAGAGAATGGA
GGCGCGGGCGATGCCGCCGCCGACGCGGACGCGGCGAGGCGTCACGCTCGCCGAGCAGAT
GGCCGCGTCGTCCAACCTCCGCGACCTCCTCAAGCTCCGCGACAACGACGACGACGACGA
CGACGGCGGCGGGCAAGGTGGTCGCCGCCAGCCGCGGCCGCTGCCCGACGCGGTGGTGGT
GGCGGCGGGGCGGCGACGCACGCTGCTCGACGTCATCCGCGGCGTCGACGACGACGATGG
CCACGACCACCCGCCCACCGGCGTCCTTGAGGGACACCGCCCCGCGACGTCGACGAGGAC
GGCGGCGGCGGGGGGAGCGCGGGGCGGGAGGGTGTCGCTGATGGCGCTGCTGGAGCAGGC
GGAGCGGCAGTGGACGACGGCCGCCGCCGGGGACGCCAGCCGGAGGCGCGTCGCGGACGA
CCACGCGGCGGCGGCGGAGGCGGGCACGAACAAGGGCTTCGCCGGCGCCGCCGCCGGCGT
GGGAGGGCGGTGCTGCGTGTGCATGGCGCGCGGCAAGGCCGCGGCGTTCATCCCCTGCGG
CCACACCTTCTGCCGCGCCTGCGCCCGCGAGCTCCGAGTCGGCCGCGGCCGCTGCCCGCT
CTGCAACGCCGCCATCCACGACGTCCTCAACCTCTTCTGATGTCACCATCTCCGCCGCCG
GCGACGACGCCGCCACCATTAATTCCGTCGACCCAATACACCATTGCTGTAATGTACTTG
TAGATAAAAAAAAGGTTCTACTACTTCTTGGCTTCTTGGCAACTGCAAATC