Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0504400-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:19498962:19503132:1 gene:Os09g0504400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cyclin, cyclin C description:Transcription regulator cyclin domain containing protein. (Os09t0504400-01)
Sequence

ATGGCCGCCAACTTCTGGACGTCGTCGCACTGCAAGCAGCTGCTGGACCAGGAGGACGTG
GACAAGGTCCCCCAGGCGGACAGCGACCGGGGCATCACGCTGGAGGAGTTCCGCCTCGTC
AAGATCCACATGTCCTTCCATATCTGGCGATTGGCACAACAGGTGAAAGTTAGACAAAGG
GTGATAGCTACTGCTGTTACTTATTTCAGGCGTGTATACACAAGAAAGAGCATGACTGAA
TATGATCCTCGTCTGGTAGCACCAACCTGTTTGTATTTGGCATCAAAGGTGGAAGAGAGC
ACAGTGCAAGCAAGACTTCTTGTCTTTTACATAAAAAAGATGTGTGCTTCTGATGAGAAG
TACCGGTTTGAAATCAAGGATATCCTTGAAATGGAAATGAAGCTCCTGGAGGCACTTGAC
TATTATTTAGTTGTTTACCACCCATATCGTCCTCTTTTACAGTTATTGCAGGATGCTGGC
ATAACAGATCTGACACAATTTGCCTGGGGAATTGTCAATGATACTTACAAGATGGATCTT
ATTCTCATACACCCACCATATATGATAGCATTAGCCTGCATCTACATTGCAAGCGTTCTT
AAAGACAAGGACATAACTCTGTGGTTTGAAGAGCTCCGTGTTGACATGAACATTGTCAAG
AATATCTCGATGGAAATTTTGGACTTCTATGACACCTACAAGATTGATCCTCAAAGAGGG
CTCCCAGAGGACAAAATAGCCCCTGTGATGAACAAACTGCCTTCAAAGGCCTAA

Peptide Sequence

PEP ID

Os09t0504400-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:19498962:19503132:1 gene:Os09g0504400 transcript:Os09t0504400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cyclin, cyclin C description:Transcription regulator cyclin domain containing protein. (Os09t0504400-01)
Sequence

MAANFWTSSHCKQLLDQEDVDKVPQADSDRGITLEEFRLVKIHMSFHIWRLAQQVKVRQR
VIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASDEK
YRFEIKDILEMEMKLLEALDYYLVVYHPYRPLLQLLQDAGITDLTQFAWGIVNDTYKMDL
ILIHPPYMIALACIYIASVLKDKDITLWFEELRVDMNIVKNISMEILDFYDTYKIDPQRG
LPEDKIAPVMNKLPSKA

Transcript Sequence

Transcript ID

Os09t0504400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19498962:19503132:1 gene:Os09g0504400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cyclin, cyclin C description:Transcription regulator cyclin domain containing protein. (Os09t0504400-01)
Sequence

GGTGGGTCCCCTCCCCTTCCCCCCTCCCCTCCGGCGAACTCCGAGCTCTTCCCGGTGAGC
GCCGCCGATTCGGCCGGAGAGGCTCGCCGGAGTCGCCTCCGCCCTGCCCACGATGGCCGC
CAACTTCTGGACGTCGTCGCACTGCAAGCAGCTGCTGGACCAGGAGGACGTGGACAAGGT
CCCCCAGGCGGACAGCGACCGGGGCATCACGCTGGAGGAGTTCCGCCTCGTCAAGATCCA
CATGTCCTTCCATATCTGGCGATTGGCACAACAGGTGAAAGTTAGACAAAGGGTGATAGC
TACTGCTGTTACTTATTTCAGGCGTGTATACACAAGAAAGAGCATGACTGAATATGATCC
TCGTCTGGTAGCACCAACCTGTTTGTATTTGGCATCAAAGGTGGAAGAGAGCACAGTGCA
AGCAAGACTTCTTGTCTTTTACATAAAAAAGATGTGTGCTTCTGATGAGAAGTACCGGTT
TGAAATCAAGGATATCCTTGAAATGGAAATGAAGCTCCTGGAGGCACTTGACTATTATTT
AGTTGTTTACCACCCATATCGTCCTCTTTTACAGTTATTGCAGGATGCTGGCATAACAGA
TCTGACACAATTTGCCTGGGGAATTGTCAATGATACTTACAAGATGGATCTTATTCTCAT
ACACCCACCATATATGATAGCATTAGCCTGCATCTACATTGCAAGCGTTCTTAAAGACAA
GGACATAACTCTGTGGTTTGAAGAGCTCCGTGTTGACATGAACATTGTCAAGAATATCTC
GATGGAAATTTTGGACTTCTATGACACCTACAAGATTGATCCTCAAAGAGGGCTCCCAGA
GGACAAAATAGCCCCTGTGATGAACAAACTGCCTTCAAAGGCCTAAAGCAGACTGAGCCC
TAGTTCAGTTGTTATCAGTCTGAGCGTCAAATCACCTTATGCTCGTACAACAGGAAATAT
GTGTCACCTTCCTTGGAGAACTTTATATTTCAAAGCCATATATATATATAGTATCAGAAT
TCAGAATTGCCCCTAACGAACGATTTAATTCAGAATTCCGAACTATATACAGCTGTTCCT
GTTGCAGCAGCTTGCGAGGCAAATCATTTACAATGAAGATCCCAACGGGTTGGGAATGGT
CTGTATCTGTATGTGTTTTTGATGTGTAAAAAAAAACATGGCTTTGGTACTATTTAGTTT
CTATAGCAAATGAAATCCTGAAAAATTCTTGCGGTGTC