Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0503400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19472475:19477139:1 gene:Os09g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic domain containing protein. (Os09t0503400-01);Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding domain containing protein. (Os09t0503400-02)
Sequence	ATGTCATCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGAGATATTTTACTCAAGATC CAGTCAGATGCTCAAAAATGGTGGGAGGAGAGCAAGGTTTTTGAGGCTGAACCTGGGAAT AAACCTCCGGGCCCTGGGGAAAAGTTCTTTGGCAACTTTCCATATCCTTACATGAATGGC TTGCTACATTTGGGCCATGCGTTCTCCTTGTCTAAACTTGAGTTTGGTGCTGCATATCAG AGGCTTCGTGGTTCAAATGTTCTTTTGCCATTTGCTTTCCACTGTACGGGAATGCCCATC AAGGCCTCAGCAGATAAACTCTCTAGGGAGGCGCAACAATATGGATATCCTCCAGCGTTT CCTGAAGTAGAGGATGATTCAAGTGCAGAAGTTGCTGATAGTAGCCAGGCTGACAATGCG GCTTCTGTTGTCCCAGATAAATTTAAGAGCAAGAAATCTAAGGCTGCTTCGAAGGTTGGC ATGCAGAAGTTTCAGTGGGAGATCATGAGAGGCTTTGGCTTATCAGATGAAGAAATCGCC AAATTTCAGGATCCTTACCACTGGTTAACTTACTTCCCTCCATTGGCGAAGGAGGACCTC AAGGCCTTTGGTCTGGGCTGTGATTGGAGGAGGTCATTCATAACTACTGACATGAACCCC TTCTATGATGCATTTGTCCGGTGGCAAATGAGAAAGCTGAAGAAAATGGGCAAGGTTGTC AAAGATATGAGGTACACAATCTACTCTCCATTGGATGGTCAACCTTGTGCTGACCATGAT CGAGCATCTGGTGAAGGTGTACAGCCACAAGAATATGTGTTAATTAAAATGGAAGTTGTT CCACCTTTTCCTCCCAAGTTGAAGACCATGGAAGGAAGAAATGTTTATTTGGCAGCAGCC ACATTGAGACCTGAGACAATGTATGGGCAGACAAACTGTTGGGTATTGCCTGATGGAAAA TATGGGGCCTTTGAGATCAATGACACTGATGTCTTCATTGTTACATCAAGGGCTGCTCTT AATCTTGCATATCAGAATCTATCAAGGGTCCCAGAAAAACCAACTTGCTTAATGGAGTTA TCTGGTTGTGATCTGATTGGTTTACCACTGAAATCCCCTCTTGCCTTCAATGAGATCATA TATGCACTTCCCATGCTTACTATCTTAACAGATAAAGGTACTGGCATTGTGACTAGTGTC CCAAGTGATTCTCCAGATGATTTCATGGCACTACAGGATTTAGTCGCAAAGCCAGCTTTG AGACAGAAGTATGGTGTCAAAGATGAATGGGTTCTTCCCTTTAAGGTTGTACCAATAATC AACATTCCTGAATTTGGAGACAAGTCTGCTGAGAAGGTGTGCCTCGATCTTAAGATTAAG AGTCAGAATGACAAGGAGAAGCTTGCTGAAGCAAAAAGGATGACATATCTGAAAGGTTTT ACTGATGGGACAATGATTGTAGGGGAGTTCAATGGCAGAAAAGTTCAAGAAGCGAAGCCA CTGATAAAGAACAAGCTTTTGGAAGAAGGCACAGCAGTGTTGTATAGCGAGCCTGAGAAG AAAGTTATGTCGAGATCTGGTGATGAGTGTGTTGTTGCTCTCACAGATCAATGGTACATT ACTTATGGTGAGACTGAATGGAAGCAGAAGGCAGTTCAATGCTTGGAGAAGATGAATACA TTCTCAGCTGAAACTCGTAATGGTTTTGAACACACGTTAGGCTGGCTGAACCAGTGGGCC TGCTCTCGTTCTTTTGGCCTAGGTACTCGCATTCCATGGGATGAGCAGTTCCTTGTAGAA TCTCTTTCTGATTCCACCCTCTACATGGCATATTACACAATCGCTCACCTTTTGCAAAAT GGCAACATGTATGGCAAGGAAATATCTTCTATCAGACCAGAACAAATGACAGATGAAGTC TGGGATTATGTGTTCTGTGATGGTCCAGCACCCAATAGTGACATCCCTCCTGCCCTCTTG AGCAAAATGAAGCTGGAATTTGAGTACTGGTATCCATTTGATATTCGTGTCTCTGGTAAG GATCTTATCCAAAACCATCTGACTTTCAGCATTTACAATCATACAGCACTTCTTCCAGAG CATCATTGGCCTCGTGGTTTCCGCTGCAATGGACATCTTATGCTTAATTCTGAGAAGATG TCCAAGTCCACAGGGAATTTCCGAACTCTTCGACAGGCCATTGAAGAATTCTCTTCTGAT GCCACTAGATTTGCCCTTGCTGATGCCGGTGATGGTATGGATGATGCAAACTTTGTCTTT GAAACAGCAAATGCTGCTATTTTGAGGCTTACAAAAGAAATTGCATGGATGGAAGAGGTT ATAGCCGCTGAATCTTCTCTGAGAGCTGGGCCTCCCTCTACCTATGCTGACCATGTGTTT GCCAACGAGATAAACATTGCGGTGATAGAAACTGAGAAGAGCTACAATGCCTTCATGTTC AGAGATGCCCTTAAGTTGGGGTTCTATGACCTACAGTTGGCTAGAGATGAGTACAGACTC TCTTGTGGAGCAGCAGGCATGAATCGTGAATTATTATGGCGGTTCATGGAGGTGCAGACT AGGCTCATTACCCCCATTTGTCCACACTATGCTGAGCATGTGTGGCGAAACATCCTGAGG AAGGAAGGATTTGCAATAAAGGCAGGCTGGCCAATTGCTGGAACCCCAGATCCCACACTA AGAATTGCTAACAAATATTTACAGGACTCCATAGTTAAATTCAGGAAGCTGCTCCAGAAG CAAGAATCTGGTTCCAAGAAACCCAAGAAGGGAACTGCACCTCCTCCATCTGAGCAAAAC AAGCTGACTGTTGGTCTGGTCTACGTCAATGAGAACTATTATGGATGGAAAGAGCAATGT TTGAGGGTTCTCCAGTCTAAATTTGATAGCCAAGCACGTTTGTTTGCTCCTGATGAGGAG ATTAATGAAGCATTGAAGAACTGCTCCATCGGACAGGAAACTAACTTCAAACAAGTCCAG AAGCTCTGCATGCCTTTCATCAAGTCGAAAAAAGATGAGGCGAGGAGTGTTGGGCCCCAC GCTTTGAATTTGAAGCTTCCTTTTGGTGAAATGAGTGTTCTCGAGGAGAACTTGGAGCTG ATCAAGAGGCAGGTAGGCCTTGAACATGCAGAGGTCCTGTCTGCTTCTGATGAGGCTGCT CGTGCTAAAGCTGGCGTGCATGCTTCTATGCTGGACAAGACCCCGCCTTCTCCTGGTGAG CCAGTAGCAATCTTCATGAGCAAACTAGACCTCGAAGCGCGGTGCTGA

Peptide Sequence

PEP ID	Os09t0503400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19472475:19477139:1 gene:Os09g0503400 transcript:Os09t0503400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic domain containing protein. (Os09t0503400-01);Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding domain containing protein. (Os09t0503400-02)
Sequence	MSSNPDGGRSFARRDILLKIQSDAQKWWEESKVFEAEPGNKPPGPGEKFFGNFPYPYMNG LLHLGHAFSLSKLEFGAAYQRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPAF PEVEDDSSAEVADSSQADNAASVVPDKFKSKKSKAASKVGMQKFQWEIMRGFGLSDEEIA KFQDPYHWLTYFPPLAKEDLKAFGLGCDWRRSFITTDMNPFYDAFVRWQMRKLKKMGKVV KDMRYTIYSPLDGQPCADHDRASGEGVQPQEYVLIKMEVVPPFPPKLKTMEGRNVYLAAA TLRPETMYGQTNCWVLPDGKYGAFEINDTDVFIVTSRAALNLAYQNLSRVPEKPTCLMEL SGCDLIGLPLKSPLAFNEIIYALPMLTILTDKGTGIVTSVPSDSPDDFMALQDLVAKPAL RQKYGVKDEWVLPFKVVPIINIPEFGDKSAEKVCLDLKIKSQNDKEKLAEAKRMTYLKGF TDGTMIVGEFNGRKVQEAKPLIKNKLLEEGTAVLYSEPEKKVMSRSGDECVVALTDQWYI TYGETEWKQKAVQCLEKMNTFSAETRNGFEHTLGWLNQWACSRSFGLGTRIPWDEQFLVE SLSDSTLYMAYYTIAHLLQNGNMYGKEISSIRPEQMTDEVWDYVFCDGPAPNSDIPPALL SKMKLEFEYWYPFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKM SKSTGNFRTLRQAIEEFSSDATRFALADAGDGMDDANFVFETANAAILRLTKEIAWMEEV IAAESSLRAGPPSTYADHVFANEINIAVIETEKSYNAFMFRDALKLGFYDLQLARDEYRL SCGAAGMNRELLWRFMEVQTRLITPICPHYAEHVWRNILRKEGFAIKAGWPIAGTPDPTL RIANKYLQDSIVKFRKLLQKQESGSKKPKKGTAPPPSEQNKLTVGLVYVNENYYGWKEQC LRVLQSKFDSQARLFAPDEEINEALKNCSIGQETNFKQVQKLCMPFIKSKKDEARSVGPH ALNLKLPFGEMSVLEENLELIKRQVGLEHAEVLSASDEAARAKAGVHASMLDKTPPSPGE PVAIFMSKLDLEARC

Transcript Sequence

Transcript ID	Os09t0503400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19472475:19477139:1 gene:Os09g0503400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic domain containing protein. (Os09t0503400-01);Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding domain containing protein. (Os09t0503400-02)
Sequence	GCAGAAAGAATCCGCCGCCGCCGCCTTCTCCTCTTCCTCCTGCTGCTGCTGGCTCCCAAC TTGCTCTCCGGGCTGAGGCTGCGGCTGCTGCTCCCCCGCCTGCGCGCCGCCGCCGCCGCC GCCGCCGTCGTCAGGAAAATGTCATCAAATCCTGATGGAGGCAGAAGTTTTGCTCGGAGA GATATTTTACTCAAGATCCAGTCAGATGCTCAAAAATGGTGGGAGGAGAGCAAGGTTTTT GAGGCTGAACCTGGGAATAAACCTCCGGGCCCTGGGGAAAAGTTCTTTGGCAACTTTCCA TATCCTTACATGAATGGCTTGCTACATTTGGGCCATGCGTTCTCCTTGTCTAAACTTGAG TTTGGTGCTGCATATCAGAGGCTTCGTGGTTCAAATGTTCTTTTGCCATTTGCTTTCCAC TGTACGGGAATGCCCATCAAGGCCTCAGCAGATAAACTCTCTAGGGAGGCGCAACAATAT GGATATCCTCCAGCGTTTCCTGAAGTAGAGGATGATTCAAGTGCAGAAGTTGCTGATAGT AGCCAGGCTGACAATGCGGCTTCTGTTGTCCCAGATAAATTTAAGAGCAAGAAATCTAAG GCTGCTTCGAAGGTTGGCATGCAGAAGTTTCAGTGGGAGATCATGAGAGGCTTTGGCTTA TCAGATGAAGAAATCGCCAAATTTCAGGATCCTTACCACTGGTTAACTTACTTCCCTCCA TTGGCGAAGGAGGACCTCAAGGCCTTTGGTCTGGGCTGTGATTGGAGGAGGTCATTCATA ACTACTGACATGAACCCCTTCTATGATGCATTTGTCCGGTGGCAAATGAGAAAGCTGAAG AAAATGGGCAAGGTTGTCAAAGATATGAGGTACACAATCTACTCTCCATTGGATGGTCAA CCTTGTGCTGACCATGATCGAGCATCTGGTGAAGGTGTACAGCCACAAGAATATGTGTTA ATTAAAATGGAAGTTGTTCCACCTTTTCCTCCCAAGTTGAAGACCATGGAAGGAAGAAAT GTTTATTTGGCAGCAGCCACATTGAGACCTGAGACAATGTATGGGCAGACAAACTGTTGG GTATTGCCTGATGGAAAATATGGGGCCTTTGAGATCAATGACACTGATGTCTTCATTGTT ACATCAAGGGCTGCTCTTAATCTTGCATATCAGAATCTATCAAGGGTCCCAGAAAAACCA ACTTGCTTAATGGAGTTATCTGGTTGTGATCTGATTGGTTTACCACTGAAATCCCCTCTT GCCTTCAATGAGATCATATATGCACTTCCCATGCTTACTATCTTAACAGATAAAGGTACT GGCATTGTGACTAGTGTCCCAAGTGATTCTCCAGATGATTTCATGGCACTACAGGATTTA GTCGCAAAGCCAGCTTTGAGACAGAAGTATGGTGTCAAAGATGAATGGGTTCTTCCCTTT AAGGTTGTACCAATAATCAACATTCCTGAATTTGGAGACAAGTCTGCTGAGAAGGTGTGC CTCGATCTTAAGATTAAGAGTCAGAATGACAAGGAGAAGCTTGCTGAAGCAAAAAGGATG ACATATCTGAAAGGTTTTACTGATGGGACAATGATTGTAGGGGAGTTCAATGGCAGAAAA GTTCAAGAAGCGAAGCCACTGATAAAGAACAAGCTTTTGGAAGAAGGCACAGCAGTGTTG TATAGCGAGCCTGAGAAGAAAGTTATGTCGAGATCTGGTGATGAGTGTGTTGTTGCTCTC ACAGATCAATGGTACATTACTTATGGTGAGACTGAATGGAAGCAGAAGGCAGTTCAATGC TTGGAGAAGATGAATACATTCTCAGCTGAAACTCGTAATGGTTTTGAACACACGTTAGGC TGGCTGAACCAGTGGGCCTGCTCTCGTTCTTTTGGCCTAGGTACTCGCATTCCATGGGAT GAGCAGTTCCTTGTAGAATCTCTTTCTGATTCCACCCTCTACATGGCATATTACACAATC GCTCACCTTTTGCAAAATGGCAACATGTATGGCAAGGAAATATCTTCTATCAGACCAGAA CAAATGACAGATGAAGTCTGGGATTATGTGTTCTGTGATGGTCCAGCACCCAATAGTGAC ATCCCTCCTGCCCTCTTGAGCAAAATGAAGCTGGAATTTGAGTACTGGTATCCATTTGAT ATTCGTGTCTCTGGTAAGGATCTTATCCAAAACCATCTGACTTTCAGCATTTACAATCAT ACAGCACTTCTTCCAGAGCATCATTGGCCTCGTGGTTTCCGCTGCAATGGACATCTTATG CTTAATTCTGAGAAGATGTCCAAGTCCACAGGGAATTTCCGAACTCTTCGACAGGCCATT GAAGAATTCTCTTCTGATGCCACTAGATTTGCCCTTGCTGATGCCGGTGATGGTATGGAT GATGCAAACTTTGTCTTTGAAACAGCAAATGCTGCTATTTTGAGGCTTACAAAAGAAATT GCATGGATGGAAGAGGTTATAGCCGCTGAATCTTCTCTGAGAGCTGGGCCTCCCTCTACC TATGCTGACCATGTGTTTGCCAACGAGATAAACATTGCGGTGATAGAAACTGAGAAGAGC TACAATGCCTTCATGTTCAGAGATGCCCTTAAGTTGGGGTTCTATGACCTACAGTTGGCT AGAGATGAGTACAGACTCTCTTGTGGAGCAGCAGGCATGAATCGTGAATTATTATGGCGG TTCATGGAGGTGCAGACTAGGCTCATTACCCCCATTTGTCCACACTATGCTGAGCATGTG TGGCGAAACATCCTGAGGAAGGAAGGATTTGCAATAAAGGCAGGCTGGCCAATTGCTGGA ACCCCAGATCCCACACTAAGAATTGCTAACAAATATTTACAGGACTCCATAGTTAAATTC AGGAAGCTGCTCCAGAAGCAAGAATCTGGTTCCAAGAAACCCAAGAAGGGAACTGCACCT CCTCCATCTGAGCAAAACAAGCTGACTGTTGGTCTGGTCTACGTCAATGAGAACTATTAT GGATGGAAAGAGCAATGTTTGAGGGTTCTCCAGTCTAAATTTGATAGCCAAGCACGTTTG TTTGCTCCTGATGAGGAGATTAATGAAGCATTGAAGAACTGCTCCATCGGACAGGAAACT AACTTCAAACAAGTCCAGAAGCTCTGCATGCCTTTCATCAAGTCGAAAAAAGATGAGGCG AGGAGTGTTGGGCCCCACGCTTTGAATTTGAAGCTTCCTTTTGGTGAAATGAGTGTTCTC GAGGAGAACTTGGAGCTGATCAAGAGGCAGGTAGGCCTTGAACATGCAGAGGTCCTGTCT GCTTCTGATGAGGCTGCTCGTGCTAAAGCTGGCGTGCATGCTTCTATGCTGGACAAGACC CCGCCTTCTCCTGGTGAGCCAGTAGCAATCTTCATGAGCAAACTAGACCTCGAAGCGCGG TGCTGAGCTTAACTGTCACAATGAAATTGCAAAATGAATAGTTAGGAGGAGTTCACTGAG ATTTCCTTATTTTCATGCACAAGTTAAAGTTATGTTAGCTTGCAGCTTCTACAGTATCAT AGTATTTTGTGGAAAAGAACAGTTTGGTTATTCCCTGTAACAGTGATGGTATAAGAAACC CATTTTGAAGAATAATTGAGTGTATTGAATGAGTTTTATTTGCATCAGGTTTGAATTTGA TGCTTCT