Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0502200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19433960:19437709:-1 gene:Os09g0502200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase (Fragment). (Os09t0502200-01)
Sequence	ATGGCGTCCATGGCCGCCCTCCTCGTCGTCGTCTTCCTCGCCGGCTGCCACGTGGGGGTA GTGGTGGCGCAGGGGAGGAGCACCGCGGCGGCGCATGGCATCGGGGTGAACTACGGGAGG GTGGCGGACGACATCCCGCCGCCGGCGAGGTCGGTGGAGCTCCTCCGGGCGGTGGGGGCC GGGTCGGTGAAGATCTACGACGCGAACTCGAGCGTGCTCCGCGCGCTGGCGGGGACGCGC ATGCGGGTGTCGATCATGGTGCCCAACGAGATCATCCCGGGGCTCGCCGCCTCCGCCGCC GCCGCGGACAGGTGGGTGGCGGAGAATCTGGTGCCCTACTACCCGGAGACGCGGGTCAAG TACCTCCTCGTCGGCAACGAGCTCCTCTCCGACTACTCCATCGCCAACTCCACCTGGCCC CGCATCGTGCCGGCCATGGAGAACCTCCACGTGAGCCTCCGGAGGAGGAGGATCAGCAGC GTCAAGATCAGCACCACGCTCGCCATGGACGCGCTCACGTCGGGGTCGTTCCCGCGGCCG CCGTCCGCCGCGGCGTTCCGCCCCGACATCGCCGGCGACGTCGTGCGCCCGCTGCTCCGG TTCTTGAACGGGACGAACTCGTACTACTTCGTCGACGCCTACCCGTACTTCGTCTGGGCC GGCAACAACGACACCGTCCCGCTCGAGTACGCGCTCTTCCAGGGCGGCGGCGGCGGCGGC CGCTACGTTGATCCGGGCACGGGGCTCACATACACCAACATGCTCGACGAAATGCTCGAC GCCGTGGTGCACGCGATGGCGAAGCTGGGGTACGGGGGCGTGAAGCTGGGCATCGCGGAG ACCGGCTGGCCCAACGGCGGCGACTACGAGCAGATCGGCTGCAACGCCCACAACGCCGCC ATCTACAACAGGAACCTCGCGGCGCGGATGGCGAGGAGCCCCGGCACGCCGGCGCGGCCC GGCGCGAAGATGCCGGTGTTCGTGTTCTCGCTCTACAACGAGGACCTCAAGCCGGGGCCC GGCACGGAGCGGCACTGGGGGCTGTACTACGCCAACGGCACGGCGGTGTACCCGGTTGAC CTCGCCGGAGCGCGGCCGCTCCGGTCGTACCCGCTGCTGCCGCCGCCGGAGAACGACGCG CCGTACAAGGGCCCCGTGTGGTGCGTGCTCGCCGGCCGCCGCGGCGAGAAGCTGAACGAG ACGGCGGTGGGCGACGCGCTGGCGTACGCGTGCGGGCAGGGGAACGGGACGTGCGACGCC ATCCAGCCCGGCGGGGAGTGCTTCCGGCCGAACACCACGGCGGCGCACGCCAGCTACGCC TTCAACTCGTACTGGCAGCAGCTGAGGAAGACCGGTGCGACGTGCTACTTCAACAACCTC GCCGAGGAGACCACCAAAGATCCAAGCCACGGATCATGCAAATTCCACAGTTCTTTGGAC TAA

Peptide Sequence

PEP ID	Os09t0502200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19433960:19437709:-1 gene:Os09g0502200 transcript:Os09t0502200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase (Fragment). (Os09t0502200-01)
Sequence	MASMAALLVVVFLAGCHVGVVVAQGRSTAAAHGIGVNYGRVADDIPPPARSVELLRAVGA GSVKIYDANSSVLRALAGTRMRVSIMVPNEIIPGLAASAAAADRWVAENLVPYYPETRVK YLLVGNELLSDYSIANSTWPRIVPAMENLHVSLRRRRISSVKISTTLAMDALTSGSFPRP PSAAAFRPDIAGDVVRPLLRFLNGTNSYYFVDAYPYFVWAGNNDTVPLEYALFQGGGGGG RYVDPGTGLTYTNMLDEMLDAVVHAMAKLGYGGVKLGIAETGWPNGGDYEQIGCNAHNAA IYNRNLAARMARSPGTPARPGAKMPVFVFSLYNEDLKPGPGTERHWGLYYANGTAVYPVD LAGARPLRSYPLLPPPENDAPYKGPVWCVLAGRRGEKLNETAVGDALAYACGQGNGTCDA IQPGGECFRPNTTAAHASYAFNSYWQQLRKTGATCYFNNLAEETTKDPSHGSCKFHSSLD

Transcript Sequence

Transcript ID	Os09t0502200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19433960:19437709:-1 gene:Os09g0502200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Beta-1,3-glucanase (Fragment). (Os09t0502200-01)
Sequence	GCTCCAGTTTCCCACGCCACCGTCGAACACCTTCACCCATGGCGTCCATGGCCGCCCTCC TCGTCGTCGTCTTCCTCGCCGGCTGCCACGTGGGGGTAGTGGTGGCGCAGGGGAGGAGCA CCGCGGCGGCGCATGGCATCGGGGTGAACTACGGGAGGGTGGCGGACGACATCCCGCCGC CGGCGAGGTCGGTGGAGCTCCTCCGGGCGGTGGGGGCCGGGTCGGTGAAGATCTACGACG CGAACTCGAGCGTGCTCCGCGCGCTGGCGGGGACGCGCATGCGGGTGTCGATCATGGTGC CCAACGAGATCATCCCGGGGCTCGCCGCCTCCGCCGCCGCCGCGGACAGGTGGGTGGCGG AGAATCTGGTGCCCTACTACCCGGAGACGCGGGTCAAGTACCTCCTCGTCGGCAACGAGC TCCTCTCCGACTACTCCATCGCCAACTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGA ACCTCCACGTGAGCCTCCGGAGGAGGAGGATCAGCAGCGTCAAGATCAGCACCACGCTCG CCATGGACGCGCTCACGTCGGGGTCGTTCCCGCGGCCGCCGTCCGCCGCGGCGTTCCGCC CCGACATCGCCGGCGACGTCGTGCGCCCGCTGCTCCGGTTCTTGAACGGGACGAACTCGT ACTACTTCGTCGACGCCTACCCGTACTTCGTCTGGGCCGGCAACAACGACACCGTCCCGC TCGAGTACGCGCTCTTCCAGGGCGGCGGCGGCGGCGGCCGCTACGTTGATCCGGGCACGG GGCTCACATACACCAACATGCTCGACGAAATGCTCGACGCCGTGGTGCACGCGATGGCGA AGCTGGGGTACGGGGGCGTGAAGCTGGGCATCGCGGAGACCGGCTGGCCCAACGGCGGCG ACTACGAGCAGATCGGCTGCAACGCCCACAACGCCGCCATCTACAACAGGAACCTCGCGG CGCGGATGGCGAGGAGCCCCGGCACGCCGGCGCGGCCCGGCGCGAAGATGCCGGTGTTCG TGTTCTCGCTCTACAACGAGGACCTCAAGCCGGGGCCCGGCACGGAGCGGCACTGGGGGC TGTACTACGCCAACGGCACGGCGGTGTACCCGGTTGACCTCGCCGGAGCGCGGCCGCTCC GGTCGTACCCGCTGCTGCCGCCGCCGGAGAACGACGCGCCGTACAAGGGCCCCGTGTGGT GCGTGCTCGCCGGCCGCCGCGGCGAGAAGCTGAACGAGACGGCGGTGGGCGACGCGCTGG CGTACGCGTGCGGGCAGGGGAACGGGACGTGCGACGCCATCCAGCCCGGCGGGGAGTGCT TCCGGCCGAACACCACGGCGGCGCACGCCAGCTACGCCTTCAACTCGTACTGGCAGCAGC TGAGGAAGACCGGTGCGACGTGCTACTTCAACAACCTCGCCGAGGAGACCACCAAAGATC CAAGCCACGGATCATGCAAATTCCACAGTTCTTTGGACTAACTGATTGCATGGGAGGACA ATATGAAAATGAACAACATTGTTCTCGATTTATTTTATTTTTGTCAAACCTGATTAGATT TAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACAAAACCTG TGAACTGTGATGTAACAGCGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAG AAGATCTGTGGCTTAATTAGAACG