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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0501850-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:19415497:19417999:-1 gene:Os09g0501850 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 15-1 description:Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-1). (Os09t0501850-01)
Sequence

ATGGCGAAGCCGCAGCTTCTTCTGGTCGTCGCCGCCGCCGCACTGCTACTCGTCGTTGCA
GCCTCCGCCAAGAAATCCGGCGACGTGACGGAGCTCCAGATCGGCGTCAAGCACAAGCCA
GAATCCTGCAGCATTCAAGCTCACAAAGGCGACAGAGTTAAAGTTCACTACCGTGGAAAA
CTTACTGATGGAACAGATTTTGATTCTAGCTATGAAAGAGGTGACCCAATCGAATTTGAG
TTGGGCACTGGCCAAGTGATCAAAGGGTGGGATCAGGGCATTCTGGGCATGTGCGTTGGC
GAGAAGAGGAAGCTGAAGATCCCTTCAAAGCTCGGTTATGGTGCTCAAGGGTCACCGCCG
ACCATCCCTGGTGGAGCGACTCTCATTTTCGATACCGAGCTTGTTGCTGTCAATGGCGAG
CCAGCCAGCAAATCCGATGAGGACGATGATGACAGCGAGCTTTAG

Peptide Sequence

PEP ID

Os09t0501850-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:19415497:19417999:-1 gene:Os09g0501850 transcript:Os09t0501850-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 15-1 description:Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-1). (Os09t0501850-01)
Sequence

MAKPQLLLVVAAAALLLVVAASAKKSGDVTELQIGVKHKPESCSIQAHKGDRVKVHYRGK
LTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKIPSKLGYGAQGSPP
TIPGGATLIFDTELVAVNGEPASKSDEDDDDSEL

Transcript Sequence

Transcript ID

Os09t0501850-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:19415497:19417999:-1 gene:Os09g0501850 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 15-1 description:Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-1). (Os09t0501850-01)
Sequence

GCGGAAAATCCTAGAAACAGAAAGAAATCGCACTCATGGCGAAGCCGCAGCTTCTTCTGG
TCGTCGCCGCCGCCGCACTGCTACTCGTCGTTGCAGCCTCCGCCAAGAAATCCGGCGACG
TGACGGAGCTCCAGATCGGCGTCAAGCACAAGCCAGAATCCTGCAGCATTCAAGCTCACA
AAGGCGACAGAGTTAAAGTTCACTACCGTGGAAAACTTACTGATGGAACAGATTTTGATT
CTAGCTATGAAAGAGGTGACCCAATCGAATTTGAGTTGGGCACTGGCCAAGTGATCAAAG
GGTGGGATCAGGGCATTCTGGGCATGTGCGTTGGCGAGAAGAGGAAGCTGAAGATCCCTT
CAAAGCTCGGTTATGGTGCTCAAGGGTCACCGCCGACCATCCCTGGTGGAGCGACTCTCA
TTTTCGATACCGAGCTTGTTGCTGTCAATGGCGAGCCAGCCAGCAAATCCGATGAGGACG
ATGATGACAGCGAGCTTTAGATAGCCAGGATGGTTCACATCTTACGCGCCAAAACAAAGT
CTAGTTGTCGAATCAAATAGTGAGTAGTGAAATGCAATGCATTTCAAATTCAGGACCCCA
TAGAGAAATCAACTCTCTTTTTTTTTCACCATGACCTTATCTGCTATTTTATAACATAAG
CTTCTATTTAACTTTT