Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0501600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19406212:19408388:-1 gene:Os09g0501600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 092 description:Similar to MYC1. (Os09t0501600-01)
Sequence	ATGGACAGCGACTACGTTGCCGGCCTTCTCATGAGCGCCGCCGCCGCGGGGCTCGACCTC GGTGTGCTCGACGGCGGCGGTGGCGCTTTCTTGGAGACGCTGTGCGGCGGGCCCGGCTTC GCGGAGCGGGCGGCGAGGTTGTGCGGCGGCGGAGCTGGGCTCTTCGGGCTGCCTGCGGTG GGGAACGCCGAGCGCGGCGGCTGCTCGAGGGAAGGCTCGTCGGTGTCCGACCCTGCGTGG GCGCACGCCACCGGCGGCGGCGGCGACAATGCCAGGAAGAGGAAAGCTCCGGCGAGCGCC GCCGCCGGGAAGGACAAGGACGCCGTCGTGGGCGGCGGCAGCAGCCCGTGCGAGGTTGGA GAGGCGAAGGCGCCGGACTCCAAGAAATGCAAAGCGGAGGTGAATCCCAAGGTGGAAGAA GCCGCCAGCGATGGCTCGGTGGGAGACAGAGTGCAGAAGCAAGGAAAGGGGAAGAACTCA TCCAAGCCGGCCGCCGAGCCGCCCAAGGACTACGTCCATGTCCGGGCACGGCGAGGTCAG GCCACTGACAGCCACAGCCTTGCAGAGAGGGTTAGAAGAGAGAAGATTAGCCAGCGGATG AAAGTGCTTCAGGACCTGGTGCCTGGATGCAACAAGGTGGTTGGCAAGGCACTCATGCTT GATGAGATCATAAACTACGTGCAATCGTTGCAGCAGCAGGTCGAGTTCCTGTCCATGAAG CTCGCGACCGTGAATCCGCAGCTCGACTTTGGCAACCTATCTACACTCTTACAGAAAGAT ATGTTCCAATCTTGTGGCCCTTCGGTGAATTCCGTATTTCCTTTGGAAAGTGCCGGTACA GCTTTTCCATTTTGTGACCAAGCAGATTTTTTCCAGTCATTTGGTCTGGGAGCCATGGAA AACCAATGTAGCCTAGATCTGGCAAACACAGCTCTACCCCACACAGGGAGCACACAGTAT GCTTTTCAGAAGCAGCAAAGGGATCTCTGGGAGGATAATACTTTCCAGTATAACGACGAA CAAAGCCAGGAGGATGCGGTTTCTGCACCGAATTTCGATGGTCAGTTGCAAGCAGCAGAT CACACAGAGATCGAGTTCTAG

Peptide Sequence

PEP ID	Os09t0501600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19406212:19408388:-1 gene:Os09g0501600 transcript:Os09t0501600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 092 description:Similar to MYC1. (Os09t0501600-01)
Sequence	MDSDYVAGLLMSAAAAGLDLGVLDGGGGAFLETLCGGPGFAERAARLCGGGAGLFGLPAV GNAERGGCSREGSSVSDPAWAHATGGGGDNARKRKAPASAAAGKDKDAVVGGGSSPCEVG EAKAPDSKKCKAEVNPKVEEAASDGSVGDRVQKQGKGKNSSKPAAEPPKDYVHVRARRGQ ATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMK LATVNPQLDFGNLSTLLQKDMFQSCGPSVNSVFPLESAGTAFPFCDQADFFQSFGLGAME NQCSLDLANTALPHTGSTQYAFQKQQRDLWEDNTFQYNDEQSQEDAVSAPNFDGQLQAAD HTEIEF

Transcript Sequence

Transcript ID	Os09t0501600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19406212:19408388:-1 gene:Os09g0501600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 092 description:Similar to MYC1. (Os09t0501600-01)
Sequence	ACCTACCTACCGTCTCCTCCATTGGACTAGCTCCTCTCTCCCAATTCCACTCCTCGCTTC TCGCGCAATTCTTGCGGGTTTGTGTTTTTTTTTTCTTCTTCTTCTTTTGGTTTCTTGATC GATGGACAGCGACTACGTTGCCGGCCTTCTCATGAGCGCCGCCGCCGCGGGGCTCGACCT CGGTGTGCTCGACGGCGGCGGTGGCGCTTTCTTGGAGACGCTGTGCGGCGGGCCCGGCTT CGCGGAGCGGGCGGCGAGGTTGTGCGGCGGCGGAGCTGGGCTCTTCGGGCTGCCTGCGGT GGGGAACGCCGAGCGCGGCGGCTGCTCGAGGGAAGGCTCGTCGGTGTCCGACCCTGCGTG GGCGCACGCCACCGGCGGCGGCGGCGACAATGCCAGGAAGAGGAAAGCTCCGGCGAGCGC CGCCGCCGGGAAGGACAAGGACGCCGTCGTGGGCGGCGGCAGCAGCCCGTGCGAGGTTGG AGAGGCGAAGGCGCCGGACTCCAAGAAATGCAAAGCGGAGGTGAATCCCAAGGTGGAAGA AGCCGCCAGCGATGGCTCGGTGGGAGACAGAGTGCAGAAGCAAGGAAAGGGGAAGAACTC ATCCAAGCCGGCCGCCGAGCCGCCCAAGGACTACGTCCATGTCCGGGCACGGCGAGGTCA GGCCACTGACAGCCACAGCCTTGCAGAGAGGGTTAGAAGAGAGAAGATTAGCCAGCGGAT GAAAGTGCTTCAGGACCTGGTGCCTGGATGCAACAAGGTGGTTGGCAAGGCACTCATGCT TGATGAGATCATAAACTACGTGCAATCGTTGCAGCAGCAGGTCGAGTTCCTGTCCATGAA GCTCGCGACCGTGAATCCGCAGCTCGACTTTGGCAACCTATCTACACTCTTACAGAAAGA TATGTTCCAATCTTGTGGCCCTTCGGTGAATTCCGTATTTCCTTTGGAAAGTGCCGGTAC AGCTTTTCCATTTTGTGACCAAGCAGATTTTTTCCAGTCATTTGGTCTGGGAGCCATGGA AAACCAATGTAGCCTAGATCTGGCAAACACAGCTCTACCCCACACAGGGAGCACACAGTA TGCTTTTCAGAAGCAGCAAAGGGATCTCTGGGAGGATAATACTTTCCAGTATAACGACGA ACAAAGCCAGGAGGATGCGGTTTCTGCACCGAATTTCGATGGTCAGTTGCAAGCAGCAGA TCACACAGAGATCGAGTTCTAGATGATCAATGATAACAGCCAATGATTTTTGTACATAGA AAGCATGAAACCAGTTGCAAAGTGAAGCTCCTAAGCTAACTGTTCTTCGAAATTTAGGCC CGAGGGAACTGATTCATTTTTCATATGCTGGATGTACGGCTACTTGATTCTTCTCATATT TGTGAGACAAATATGATCTACAAAATAGTAGGTTATGTACTAGATATGGTGCAAATATTA CAAGCACCATCTCTCTTCCAGTATGTACGAGCCGGCTGGTAATAGCCTGGTATTGCCATG ATACAGTGTACTGTTGATTTTGTCTTGAAATGAAAAGGTATGTGCTATTTCAAC