Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0497100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19220516:19227564:-1 gene:Os09g0497100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os09t0497100-01)
Sequence	ATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCAGGGAAGTGGCCACCA AGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCAGAAGATGAGTTAGCG GAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGGAGGGGTTCTGTCCTG GAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTTGCACTTGGTCACCTC ACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTGGGCACTGAAGCTAAC AATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTCAAATACTATATGTCC AAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGGAACCAGTTTGGCAAG TCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGGTCCTTACTTCTTGGT CATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAGTCACCAAGTTTGGAT TCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACATCTAACTTAGGGGGC CACAGTCCAAATCTTGTAGATTCAATTAAGGAAAACTTTCATCGGAGCAATGGTTTGTAT GATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGGTCGATTTATTCTGGC ATTAGTTCATTGAAGAATTCCTCACTTTATGTTGTCCAGTCATCAGACTTGAATGGATTT CCACCAGATGCTCATCAGCGTTCCCCTAGACCTATTAGGACTCCAGTCAGTACAAAACTT ACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACTTCATCCTGTTCTGACTACAGTACT ATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAACCTGGTGAACCAGTT GGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAATATTAGTCCGGATATC CTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCAGTGTGGAATGGCCTA TCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGAATTAATCTTCCTCAA GTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCTGGTGATGTTCAACTG ATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCTTTTGGGATACCATGT TATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGAATCGGCGGCTATGGT TTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCTCAACTTCCTGGTTTT CCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCATATAAGATGTATGAG CATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTTACGCATTATTTTCAA CAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCATATGATACAATGGTTTCAAGTAAT AATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATTGACCCATCAGAGCAG AAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACTCCCATCAAAGGTGGA AAGCCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTACCGATGCCTTATCCA GCAGGTCCAACATTACATGGGCAACCTGCTTCTGGAACATCTCCTCGTGACAAAAGGAAC GATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGTTCCGAGATACAAGGT CAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCTGTTGAAGAACTAATA TCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAGATAGTGAAATACAGC TCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAATTGCACCATTGAAGAA AAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTGATGACTGATGTATTC GGAAATTATGTTATTCAGAAGTTCTTCGAAAAGGGGAGCCCACAGCAAAAGAGAGAAATA GCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATGTATGGATGCAGAGTA ATTCAGAAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTTCTTGTTGGTGAACTC GATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCATGTTATACAAAAATGC ATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCTTTTCAGTGCCAGGTT GCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGAGAATCCTCGAGCGTTGC AGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAGTCTGCTTGCATCCTC GCACAAGATCAGTATGGGAACTATGTTGTGCAGCATGTTTTGGAGAAAGGGAATGAACAT GAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTGCCCATGAGCCAAAACAAA TTTGCGTCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGTGCAGAGCGGGAACTT TTGGTCAAGGAGATTCTGAAGCAAACTGAGGGCAATAACTATTTGCTGGTGATAATGAAG GACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACATGCAATGAACAACATAAG GAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAGAAATACACCTATGCC AAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCTGTGCAGTCCGAATCC AAAAAAACTGTAACCAAGGGCTGCTGA

Peptide Sequence

PEP ID	Os09t0497100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19220516:19227564:-1 gene:Os09g0497100 transcript:Os09t0497100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os09t0497100-01)
Sequence	MATESARPLSGGTGAGKWPPSKDTGSYDSIPASLSEDELAELAFMPNSGGIFGKWRGSVL ERSGSAPPTMEGSLVALGHLTGQPSGNLGAILPNLGTEANNSESKENIYYDSACVKYYMS KVNLNPRFPPPLVSRNQFGKSEERKPFSLDDSSSRSLLLGHPTLPTHKEEPEDEKSPSLD SSSADDAQCDSAQSTSNLGGHSPNLVDSIKENFHRSNGLYDNSSDLLNANSGDGGSIYSG ISSLKNSSLYVVQSSDLNGFPPDAHQRSPRPIRTPVSTKLTSDSLPASSPPTSSCSDYST ITEACQQRNPSMAVKPGEPVGTMLDSSDFSLKNLNISPDILSSSYVMQQWQKNAPVWNGL SNVVHGDHVPMIPPGINLPQVPFVDNSGFGHMKFPGDVQLMSQIGMATPFCTPNSFGIPC YPNLQSPSVWVPPFGIGGYGLPGPFVPPVITNFTPQLPGFPSAVNLAAATDLFHPYKMYE HLGVPMPSPVPDQSLTHYFQQPPIHPYGVGNPYDTMVSSNNFVGNPAGVFGSPIIDPSEQ KFQIPVTTVAANASTPIKGGKPIGNYETASPYFGVPMPYPAGPTLHGQPASGTSPRDKRN DVKGFQPPRKNMPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYS SDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREI ANKLAGHVFSLSLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKC IECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACIL AQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAEREL LVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYA KHIVSLVERLCGDGAVQSESKKTVTKGC

Transcript Sequence

Transcript ID	Os09t0497100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19220516:19227564:-1 gene:Os09g0497100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pumilio RBD (Fragment). (Os09t0497100-01)
Sequence	GACTCAAAGCAGAGAGAGGAGAAAAAACACAAAAGGCAGCGAAGCGGCCGCGAAAAGCTC GACTCGGAGATAAAAGGGAAAGCGAGCGAGAAAGAGAGAGGAGAAGCATTGGTGGCGTGA GGCGGTTGGAGCGGGGCACGCGCGCGGCCGAAGGGGGGAGAGGAGAGAGGAGGCGGGGTG GCGCCGACGCCGGCGGCAAAGGTTGGTTGTCCTAGGGTTCCTGTCGTTGCTCGCGGGAAG GGTCAGCGAAGCAAAATGGCTACAGAGAGTGCTCGGCCGTTGAGTGGAGGAACTGGAGCA GGGAAGTGGCCACCAAGCAAGGACACGGGTTCCTATGATTCTATTCCAGCTAGCCTTTCA GAAGATGAGTTAGCGGAGTTGGCCTTCATGCCAAATAGTGGCGGCATTTTTGGGAAGTGG AGGGGTTCTGTCCTGGAACGCAGTGGAAGCGCTCCTCCTACCATGGAAGGTTCTTTAGTT GCACTTGGTCACCTCACAGGTCAACCGAGTGGCAACCTTGGGGCCATACTGCCAAACTTG GGCACTGAAGCTAACAATTCAGAGTCTAAGGAGAATATATATTATGATTCGGCATGCGTC AAATACTATATGTCCAAGGTGAATTTGAACCCAAGGTTTCCTCCACCACTCGTTTCAAGG AACCAGTTTGGCAAGTCTGAAGAACGAAAGCCGTTCTCCCTTGATGACAGCAGCAGCAGG TCCTTACTTCTTGGTCATCCTACTCTGCCAACACACAAGGAAGAACCTGAGGACGAAAAG TCACCAAGTTTGGATTCAAGTTCAGCAGACGATGCTCAATGTGATTCTGCCCAAAGCACA TCTAACTTAGGGGGCCACAGTCCAAATCTTGTAGATTCAATTAAGGAAAACTTTCATCGG AGCAATGGTTTGTATGATAATTCTTCCGATCTTTTAAATGCAAACTCTGGTGATGGAGGG TCGATTTATTCTGGCATTAGTTCATTGAAGAATTCCTCACTTTATGTTGTCCAGTCATCA GACTTGAATGGATTTCCACCAGATGCTCATCAGCGTTCCCCTAGACCTATTAGGACTCCA GTCAGTACAAAACTTACTAGCGACAGTCTGCCAGCTTCATCTCCTCCCACTTCATCCTGT TCTGACTACAGTACTATTACTGAAGCTTGTCAGCAAAGAAATCCAAGCATGGCCGTTAAA CCTGGTGAACCAGTTGGTACCATGCTTGATAGTTCAGACTTCAGTCTGAAGAATTTGAAT ATTAGTCCGGATATCCTAAGTAGTTCATATGTCATGCAACAGTGGCAGAAAAATGCCCCA GTGTGGAATGGCCTATCAAATGTAGTCCATGGCGATCATGTGCCAATGATTCCTCCAGGA ATTAATCTTCCTCAAGTTCCATTTGTGGACAATTCCGGTTTTGGTCATATGAAGTTCCCT GGTGATGTTCAACTGATGTCCCAGATCGGGATGGCAACACCTTTTTGTACACCAAATTCT TTTGGGATACCATGTTATCCTAATTTGCAGTCGCCTAGTGTTTGGGTTCCTCCATTCGGA ATCGGCGGCTATGGTTTGCCTGGTCCATTTGTCCCACCTGTTATAACTAACTTCACTCCT CAACTTCCTGGTTTTCCTTCAGCAGTAAATCTTGCTGCAGCAACTGACTTATTTCACCCA TATAAGATGTATGAGCATCTTGGGGTACCTATGCCATCCCCTGTTCCTGATCAGAGCCTT ACGCATTATTTTCAACAGCCCCCTATCCATCCGTATGGTGTTGGAAATCCATATGATACA ATGGTTTCAAGTAATAATTTTGTAGGGAATCCTGCTGGCGTTTTTGGTTCACCAATCATT GACCCATCAGAGCAGAAGTTTCAGATACCGGTTACTACTGTAGCTGCTAATGCCTCTACT CCCATCAAAGGTGGAAAGCCCATTGGGAATTATGAGACTGCCTCACCTTACTTTGGCGTA CCGATGCCTTATCCAGCAGGTCCAACATTACATGGGCAACCTGCTTCTGGAACATCTCCT CGTGACAAAAGGAACGATGTCAAGGGATTCCAACCCCCTCGAAAAAATATGCCTGTTAGT TCCGAGATACAAGGTCAGAAAGGGAGGGAGAAGTTTGATGATCCCAAGGCACACTTTTCT GTTGAAGAACTAATATCCAGCAGAACTCATAGGGTTGAGCTGGCTGACATCAAAGGACAG ATAGTGAAATACAGCTCGGACCAAAATGGTAGCCGGTTCATTCAGCAGAAACTGGAGAAT TGCACCATTGAAGAAAAGGATTTACTTTTTGCCGAGGTCCTTCCTCATGCTTTGGAATTG ATGACTGATGTATTCGGAAATTATGTTATTCAGAAGTTCTTCGAAAAGGGGAGCCCACAG CAAAAGAGAGAAATAGCTAATAAGCTTGCCGGTCATGTGTTTTCTTTGAGCCTTCAGATG TATGGATGCAGAGTAATTCAGAAGGCCCTTGAAGTAATTGATCTTGAACAGAAAATTGTT CTTGTTGGTGAACTCGATGGACATGTGCTGCGATGTGTTCATGACCAAAATGGGAATCAT GTTATACAAAAATGCATTGAATGTATTCCATTGGAACATATTGGTTTTCTGGTGTCATCT TTTCAGTGCCAGGTTGCCAAACTGTCAATGCATACATATGGATGTCGTGTTATTCAGAGA ATCCTCGAGCGTTGCAGCAATAATTCTGAATGCCTTTGCATAATTGATGAAATCTTGCAG TCTGCTTGCATCCTCGCACAAGATCAGTATGGGAACTATGTTGTGCAGCATGTTTTGGAG AAAGGGAATGAACATGAAAGGGGCCAAATCATCACTAAATTGGCTGGGCAGGTAGTGCCC ATGAGCCAAAACAAATTTGCGTCTAATGTCATAGAGAGGTGTTTTGAACATGGGGGCAGT GCAGAGCGGGAACTTTTGGTCAAGGAGATTCTGAAGCAAACTGAGGGCAATAACTATTTG CTGGTGATAATGAAGGACCAGTATGCTAATTATGTGGTACAGAAGATGCTTACAACATGC AATGAACAACATAAGGAGATCCTTCTCAGTCGTGTGAAAATCCATTTGCCATTATTGAAG AAATACACCTATGCCAAGCACATCGTCAGCCTAGTCGAGCGCCTCTGCGGTGACGGAGCT GTGCAGTCCGAATCCAAAAAAACTGTAACCAAGGGCTGCTGAATTCGCCACAGGAAAGCC GACTCTTTTCTGCCAACCCTGTCAAGTTCAGCGTAGAAGGCCTATCAGTCGCAAAAGTGG CTAACAAAGCAACCAAAAAAAAAAACTGTCAACCTGTCACCATAGATCATCATCATACAG ATATAGTCGTTCCAAGCGGTTTGTCCGTGTATTTAAGCTAGGAAATGATAGTGTCATACT ATAGGAATGGTAATAATCATCTGTGTGGGCTGTGGCTGTGGATGCTGCGTCTCACAGAAG AGAGTCTGAGTGTGGTGGTGCGTTGCCGTACAGTACATATCCCGTAGTCTTGAGTCTTGT ACCCCTGCTTGGTGATGTGTAGTTATCGCCGCATCCAGCTTGCTTGGTC