Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0494300-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:19150494:19155796:-1 gene:Os09g0494300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methyl-binding domain protein MBD111. (Os09t0494300-01);Similar to Methyl-CpG-binding domain protein 1 (Methyl-CpG binding protein MBD1). (Os09t0494300-02)
Sequence	ATGGGAAATTCAAAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACT GATGGCCACCAACTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTT CTGTTCAACCCTGAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCA TCTTTGCAGAAATCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACT GTCCAATGTGCCAAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAA ATTCGTGAGTGTATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCT GATGTAACATGTAATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATT GACAAACCCAATATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGC GAAGGAGGCACCAAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGG TCACTGGTTGAAATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTA ACATTAACTCAATTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAG CGCCCTAAGATAGTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAG CCGGAAGAAGTGAGCCCCATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGAAGCT GGCGAACGAGCTTCTCATGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAACACGA AAAAGGAAAGCGGAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAA CCAAAAACCAAGTTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGA

Peptide Sequence

PEP ID	Os09t0494300-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:19150494:19155796:-1 gene:Os09g0494300 transcript:Os09t0494300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methyl-binding domain protein MBD111. (Os09t0494300-01);Similar to Methyl-CpG-binding domain protein 1 (Methyl-CpG binding protein MBD1). (Os09t0494300-02)
Sequence	MGNSKTPQPSKKSRIMLSDTDGHQLDNDEFSSESASNQMVLFNPETVAKGQDELGENHSP SLQKSANNPNRGMPSIGAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECERAREWRP DVTCNDPEDISQDGSRLWAIDKPNIALPPPGWERQIRIRGEGGTKFADVYYTSPTGRKLR SLVEIDRYLLENPDYVAQGVTLTQFSFQIPRPLRQDYVKKRPKIVNPNDEASVVTTKSVK PEEVSPIAWAAPSVHQEGEAGERASHADEPPEAEELELTRKRKAESPLFEEAHSNHVSDE PKTKLEDTQNGGPSA

Transcript Sequence

Transcript ID	Os09t0494300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19150494:19155796:-1 gene:Os09g0494300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methyl-binding domain protein MBD111. (Os09t0494300-01);Similar to Methyl-CpG-binding domain protein 1 (Methyl-CpG binding protein MBD1). (Os09t0494300-02)
Sequence	GTCCCCCCTTTGCCCCTCTTCTTTACCGATGCTGCCAGGCACACCACCGTAAGAGTCGTC CCCCGTGCTCCTCCTCCTCCTCCTCCTCCTCGTCGTGGTGCGACCCCGCGCCAAGCAATC TCCGGCGAGCCGGCGTCGCCGGAGGCGGCGGCCCGAGGCTCGCGGCCCGCACCCCCCCAC CCACCGCCGCAAACCTCGTCCGCACCCGCGGAGCCTCTCCCTCTCTTCGTTCGTCGTCGG TGCCTCGAGGATTCCCTCGGCGTCGACTCCTCGCGAGTGAGTTCGCTCGCCCCGTCGCCT GCGCCGATCTCCATCCCCGCGAGCTGAGCAGGGGGAGGGCGCCGCCTCCGTCGTCGTCGT CTGTCCTGCTGCTTCCGCCGCATCCCCGGCAAATCTTGTAAAAAGCCTATGGGAAATTCA AAAACTCCTCAACCATCAAAGAAGTCCCGAATTATGTTGTCAGATACTGATGGCCACCAA CTGGACAATGATGAGTTTTCATCTGAAAGTGCATCAAATCAAATGGTTCTGTTCAACCCT GAAACTGTAGCTAAAGGGCAAGATGAACTTGGAGAGAACCATTCACCATCTTTGCAGAAA TCAGCCAATAATCCGAACCGAGGAATGCCATCTATTGGGGCATTCACTGTCCAATGTGCC AAGTGTTTCAAATGGAGACTTATTCCGACAAAAGAGAAGTATGAAGAAATTCGTGAGTGT ATTATACAGGAACCTTTTGAGTGCGAACGAGCCCGTGAGTGGAGACCTGATGTAACATGT AATGATCCAGAAGATATATCTCAGGATGGAAGCAGGCTTTGGGCTATTGACAAACCCAAT ATTGCACTACCTCCTCCTGGATGGGAAAGACAGATCAGAATAAGAGGCGAAGGAGGCACC AAATTTGCTGATGTGTATTACACTTCTCCTACTGGAAGGAAACTGAGGTCACTGGTTGAA ATTGATAGGTACCTCTTGGAGAATCCGGATTATGTTGCACAGGGTGTAACATTAACTCAA TTTTCATTCCAGATTCCTAGGCCTCTGCGACAGGACTATGTCAAAAAGCGCCCTAAGATA GTGAATCCAAATGATGAAGCAAGTGTAGTAACGACCAAGTCCGTTAAGCCGGAAGAAGTG AGCCCCATAGCCTGGGCAGCACCATCGGTACATCAGGAGGGTGAAGCTGGCGAACGAGCT TCTCATGCTGATGAGCCACCTGAAGCAGAAGAACTGGAGCTAACACGAAAAAGGAAAGCG GAAAGCCCTCTGTTCGAAGAGGCACATTCTAACCATGTTTCTGATGAACCAAAAACCAAG TTAGAGGATACTCAAAATGGAGGCCCTTCAGCTTGAAGACTGCAACACAGTGATACCTTA AGCTCCCCATCCATGGTTTTATTGATTCTCTTTTGCGCTTCATAATTTGGGGGCCAGTTT TTCCTGTAATGCAAGGCCTTACTGGCCTTTATATGTATCATGCCACGTTGGTGCCAGGTT GGAGGCTGAATCTGACTCAAAATCAAGTTTTCGGACACGTTACAATTGTTGTATCCAAAA GCCATGTTGGAACTCTTTTCAGGAGTGTGCTTTTTCTAGTATGGGCCTAGGTAGGAAACC TGCCGTGTAAGATTAGCTCCTCTCCTTGTTTTCTCTTTGTAAGATAAGGAAATGTTGTAG GGACATGTTTTTCTTGTATGTGGGTTTGATCCCTTTTATTATCTAAGACATGCCATTTCT GATGGTG