Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0493700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:19121959:19125032:-1 gene:Os09g0493700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 42 description:Similar to CUC2. (Os09t0493700-01)
Sequence	ATGGGGATGGAGAACCCGCCGCTCCGGTGGCCGCCGGGGTTCCGCTTCAGCCCGACCGAC GAGGAGCTCGTCCTCTACTTCCTCAAGCGCCGGATCGCCACCGGCCGCCCCACCCCCTAC ATCGCCGACGTCGACGTCTACAAGTCCCACCCCTCCCACCTCCCTGAGAGGTCGGCGCTG CGGACGGGGGACAAGCAGTGGTTCTTCTTCAGCCGGATGGACCGCAAGTACCCCAACGGC TCGCGGGCGAGCCGCACCACCGGCGAGGGCTACTGGAAGGCCACCGGGAAGGACCGCTCC ATCTGCAACGGCGGCGGCGGCGGCACCGCCTCGGGGCGCGCGGTGGGGAGCAAGAAGACC CTCGTGTACCACCACGGCCGCGCCCCGCGCGGGGAGCGCTCGGACTGGGTCATGCACGAG TACACCCTCCTCGCCGACGCGCTCCCGCCCGCCGCGCGCGACCGCGAGGCGTACGCTCTG TACAAGCTGTTCCACAAGAGCGGCGCCGGGCCCAAGAACGGCGAGCAGTACGGCGCCCCC TTCCGGGAGGAGGATTGGCTCGACGACGACGACCACCACCACGACCAGCTTCCTGCTGAG GCGGCTCTTCCGGCTCCAGCCACAACTAGTGGTAGAGCTGCAACAACTGAGGAGCATGCT GACTTTGAGCTTCCGGGTGGGGATCTTGATGTGCTCCTTGCGCAAATTGAAAATGATCAG GATATAATCGAAGCGCAATTGGATTTCTCAACTCATGTTACTTCCCAAGTTCAGATTCAG CATCGTGTTCATCAAGGTTGGCTCAGTGATGATGGCGGAAAATCAGATGTTGCGGATGCT ACGACTAGTGGCAGTGCTTTGTTGATGGCAGAGAATACGTGCGCTGAACTTCCAATTGAT GGTCTCGAGCAACTTCTGATGCAAATATCGGATGATCAACAGACAGTTGAAATGCTCTCT GGTTTCTCAGCATCCGTTCCCCAATCGCAGCTTCAACATGATTATCATCAGGGTTGTCTT GGTGTTCATAGGGAGGAGGTTGGTGTTGCAGATTCTACCACTGTTAGTAGTGCTGTGGTG ACAGAAGAATGTACTGTCCGTGAGCTTCAGGATATTGAAGGGCTTCTGATGCAAATAGAA AATGACCAGGAAAATGCCGAATCACTGCCAGATTTCTCCACACCAGTTCATCTCCATGAT TGTCATCAGGCCGCCTTCGGAGATTTTCAAGGAAGCCAGAGGGCTACATTCAACATTGCA AATCTTTCTACTATGGTGCAGGAAAGCCCAAATTTTGATCTGCAAACTGGTCCAAGTAAT CAAATTACTGAGTCTATTCTCACCACCGAGCCAATGAATGGAGAAACAAATGCTGTGGAA GAAACAAGTCCTCTGCGCTCTATGTCAGTATTGGGTAGTTATGATAGGCAGGATGGTGAT GATGAATTCCTTGAAATCAATGATTTCTTCGACCCAGAAGATTTAGAACAGATTTTGGGC AGTACAAGAAGTCAGAACTTGATTCCTGCTGATGATGGAGTGTTTGATAGTTTGCAATAC TCTGATGCTCCAATGTTTCTGCCTGGTTCATTTGACAGAACTGGTGTGGTGGCTGAAAAC CATTATGTTGAATTTGGTGCTAGTGGAATTCAGAACCAGGGATTTCAGCATACAACTGAA TTATTGGCACATAATCAAGTCGCTCTAAATGTGCGGAACCATATGAAGGACAACCATGTT GTCTTCTCACATTCATCAGATGCTACCATTATTCATACAGTGAATGAGCAACCGCCTAAC CGGAGTTCAAATGCTTCACAATCATGGTTCAATGGGGCTCTATCTGCCTTGCTCGATTCT GTTCCTAGCAGTCCAGCTATGGCTGCTGAAAACATAGGTCTTAACAGAACACTGCAACGC ATTTCGAGCTTTAGGTCACAACAACCTGCAAGAGAAGAAGTTAGCAGTACTCTTATCAAC ACCAGAAGAAGAGGCGGTGGGCTAATTTTCATCTCGTTAATGGTTTTACTTGTTGCTATC ATGTGGACCTTTAGCAATGGGTCTGCAGTCAAGCTTAGCAAGGGGTTATGGAAGTTTCCC TCTACATAA

Peptide Sequence

PEP ID	Os09t0493700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:19121959:19125032:-1 gene:Os09g0493700 transcript:Os09t0493700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 42 description:Similar to CUC2. (Os09t0493700-01)
Sequence	MGMENPPLRWPPGFRFSPTDEELVLYFLKRRIATGRPTPYIADVDVYKSHPSHLPERSAL RTGDKQWFFFSRMDRKYPNGSRASRTTGEGYWKATGKDRSICNGGGGGTASGRAVGSKKT LVYHHGRAPRGERSDWVMHEYTLLADALPPAARDREAYALYKLFHKSGAGPKNGEQYGAP FREEDWLDDDDHHHDQLPAEAALPAPATTSGRAATTEEHADFELPGGDLDVLLAQIENDQ DIIEAQLDFSTHVTSQVQIQHRVHQGWLSDDGGKSDVADATTSGSALLMAENTCAELPID GLEQLLMQISDDQQTVEMLSGFSASVPQSQLQHDYHQGCLGVHREEVGVADSTTVSSAVV TEECTVRELQDIEGLLMQIENDQENAESLPDFSTPVHLHDCHQAAFGDFQGSQRATFNIA NLSTMVQESPNFDLQTGPSNQITESILTTEPMNGETNAVEETSPLRSMSVLGSYDRQDGD DEFLEINDFFDPEDLEQILGSTRSQNLIPADDGVFDSLQYSDAPMFLPGSFDRTGVVAEN HYVEFGASGIQNQGFQHTTELLAHNQVALNVRNHMKDNHVVFSHSSDATIIHTVNEQPPN RSSNASQSWFNGALSALLDSVPSSPAMAAENIGLNRTLQRISSFRSQQPAREEVSSTLIN TRRRGGGLIFISLMVLLVAIMWTFSNGSAVKLSKGLWKFPST

Transcript Sequence

Transcript ID	Os09t0493700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:19121959:19125032:-1 gene:Os09g0493700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 42 description:Similar to CUC2. (Os09t0493700-01)
Sequence	GAGTTGACTCGCCATTTCGCCATTTCGTCGAGAGGTTGCTGTGCCAGTCACCAACCCATT CCGGCGGCGGCGGCGGAGGAGACCGAGATGGGGATGGAGAACCCGCCGCTCCGGTGGCCG CCGGGGTTCCGCTTCAGCCCGACCGACGAGGAGCTCGTCCTCTACTTCCTCAAGCGCCGG ATCGCCACCGGCCGCCCCACCCCCTACATCGCCGACGTCGACGTCTACAAGTCCCACCCC TCCCACCTCCCTGAGAGGTCGGCGCTGCGGACGGGGGACAAGCAGTGGTTCTTCTTCAGC CGGATGGACCGCAAGTACCCCAACGGCTCGCGGGCGAGCCGCACCACCGGCGAGGGCTAC TGGAAGGCCACCGGGAAGGACCGCTCCATCTGCAACGGCGGCGGCGGCGGCACCGCCTCG GGGCGCGCGGTGGGGAGCAAGAAGACCCTCGTGTACCACCACGGCCGCGCCCCGCGCGGG GAGCGCTCGGACTGGGTCATGCACGAGTACACCCTCCTCGCCGACGCGCTCCCGCCCGCC GCGCGCGACCGCGAGGCGTACGCTCTGTACAAGCTGTTCCACAAGAGCGGCGCCGGGCCC AAGAACGGCGAGCAGTACGGCGCCCCCTTCCGGGAGGAGGATTGGCTCGACGACGACGAC CACCACCACGACCAGCTTCCTGCTGAGGCGGCTCTTCCGGCTCCAGCCACAACTAGTGGT AGAGCTGCAACAACTGAGGAGCATGCTGACTTTGAGCTTCCGGGTGGGGATCTTGATGTG CTCCTTGCGCAAATTGAAAATGATCAGGATATAATCGAAGCGCAATTGGATTTCTCAACT CATGTTACTTCCCAAGTTCAGATTCAGCATCGTGTTCATCAAGGTTGGCTCAGTGATGAT GGCGGAAAATCAGATGTTGCGGATGCTACGACTAGTGGCAGTGCTTTGTTGATGGCAGAG AATACGTGCGCTGAACTTCCAATTGATGGTCTCGAGCAACTTCTGATGCAAATATCGGAT GATCAACAGACAGTTGAAATGCTCTCTGGTTTCTCAGCATCCGTTCCCCAATCGCAGCTT CAACATGATTATCATCAGGGTTGTCTTGGTGTTCATAGGGAGGAGGTTGGTGTTGCAGAT TCTACCACTGTTAGTAGTGCTGTGGTGACAGAAGAATGTACTGTCCGTGAGCTTCAGGAT ATTGAAGGGCTTCTGATGCAAATAGAAAATGACCAGGAAAATGCCGAATCACTGCCAGAT TTCTCCACACCAGTTCATCTCCATGATTGTCATCAGGCCGCCTTCGGAGATTTTCAAGGA AGCCAGAGGGCTACATTCAACATTGCAAATCTTTCTACTATGGTGCAGGAAAGCCCAAAT TTTGATCTGCAAACTGGTCCAAGTAATCAAATTACTGAGTCTATTCTCACCACCGAGCCA ATGAATGGAGAAACAAATGCTGTGGAAGAAACAAGTCCTCTGCGCTCTATGTCAGTATTG GGTAGTTATGATAGGCAGGATGGTGATGATGAATTCCTTGAAATCAATGATTTCTTCGAC CCAGAAGATTTAGAACAGATTTTGGGCAGTACAAGAAGTCAGAACTTGATTCCTGCTGAT GATGGAGTGTTTGATAGTTTGCAATACTCTGATGCTCCAATGTTTCTGCCTGGTTCATTT GACAGAACTGGTGTGGTGGCTGAAAACCATTATGTTGAATTTGGTGCTAGTGGAATTCAG AACCAGGGATTTCAGCATACAACTGAATTATTGGCACATAATCAAGTCGCTCTAAATGTG CGGAACCATATGAAGGACAACCATGTTGTCTTCTCACATTCATCAGATGCTACCATTATT CATACAGTGAATGAGCAACCGCCTAACCGGAGTTCAAATGCTTCACAATCATGGTTCAAT GGGGCTCTATCTGCCTTGCTCGATTCTGTTCCTAGCAGTCCAGCTATGGCTGCTGAAAAC ATAGGTCTTAACAGAACACTGCAACGCATTTCGAGCTTTAGGTCACAACAACCTGCAAGA GAAGAAGTTAGCAGTACTCTTATCAACACCAGAAGAAGAGGCGGTGGGCTAATTTTCATC TCGTTAATGGTTTTACTTGTTGCTATCATGTGGACCTTTAGCAATGGGTCTGCAGTCAAG CTTAGCAAGGGGTTATGGAAGTTTCCCTCTACATAATAGGATGCACCCGGTTATCCTGGT GGCCAGTGCTTCTTACTACTTCAAGTACTAATTCTTGTTTTGCTATCCTTTCCTCTATTC CTTTACATTGAAAAAGGCAACAATCTAGGAAAATATTAGAGGATTATGTGGTGTTAGCAC TTACTTTCAGAATATTATGCGAGAGATGTTAAAACAAAACAAAATGAGAAAAAGAAACAT CTGAGGTGAACTTCTGGATGTTTTTGTCCTCATCATTTTGATGAAAGTATATATTGAATG TAATTAAACGATGATGGATTGTTGAGAAGTGCAGTTGCTGTGCACGATAAATGAAAAATC CATTTTTGTTGC