Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0491756-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:18985894:18987150:1 gene:Os09g0491756 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 60 description:U2 snRNP auxiliary factor, small subunit. (Os09t0491756-01);U2 snRNP auxiliary factor, small subunit. (Os09t0491756-02)
Sequence	ATGGCCGAGCACCTCGCTTCCATCTTTGGCACGGAGAAGGACCGCGTGAACTGCCCCTTC TACTTCAAGATCGGCGCGTGCCGCCATGGCGACCGATGCTCCCGCCTGCACAACAAGCCG TCGGTCTCGCCGACGCTGCTGCTCTCCAACATGTACCTGCGTCCGGACATGATCACCCCT GGAATTGATGCTCAGGGCAACCCCATCGACCCTGAGAAGATCCAGGCCGACTTCGAGGAT TTCTACGAGGACATCTTTGAGGAACTCAGCAAGTACGGCGAGATCGAGAGCCTCCACGTG TGTGACAACTTCGCCGACCACATGATCGGCAATGTGTATGTTCAATTCAGGGAGGAGGAT CAGGCCGCCAGAGCGCTGCAGGCGCTGACGGGGCGGTACTACTCCGGCCGTCCTATCATT GTCGAGTTCTCGCCGGTGTCCGATTTCCGGGAGGCCACCTGCCGGCAATATGAAGAGAAC AGCTGCAACCGTGGTGGGTACTGCAACTTCATGCACGTCAAGGAGATCGGCAGAGACCTG AGGAAGAGGTTGTTTGGGCACCTGCATAGGTCCCGGAGAAGCCATAGCCATGGCCGGAGC CGCAGCCCGAGCCCGTACCATTACCGGAGGGACTATGATCGGAGGAGCTCATCGCGGTCC AGGGACCACGACGATTACTACCGTGGAGGTAGCCACGATTACTACCGTGGAGGTAGCCGG AGGAGCAGCGAGAGGCACCGCAGCAGCTACGACAGCGATGGCAGCAGGCGGCGGCACAGG TCCAGGACTAGGAGTCCTGTCAGGGATGGTAGCGAGGAGAGGAGAGCTCAAATTGAGCAG TGGAACCGTGAAAGGGAGGCTGCACAAGTGTGA

Peptide Sequence

PEP ID	Os09t0491756-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:18985894:18987150:1 gene:Os09g0491756 transcript:Os09t0491756-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 60 description:U2 snRNP auxiliary factor, small subunit. (Os09t0491756-01);U2 snRNP auxiliary factor, small subunit. (Os09t0491756-02)
Sequence	MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR RSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQV

Transcript Sequence

Transcript ID	Os09t0491756-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18985894:18987150:1 gene:Os09g0491756 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 60 description:U2 snRNP auxiliary factor, small subunit. (Os09t0491756-01);U2 snRNP auxiliary factor, small subunit. (Os09t0491756-02)
Sequence	AGTGCTGTTATTTTGAAGGTTTCGGAACCGGAATTCGGAATTGCAGTAGCAGTGGATGCC TTTATAAATCAAGTTCTTGTCCTTGGCTTCAAATACTCGATGTGTTTCTTGGCTAATCCT AATCCCTAGCTGCTTGTGTGTTGCGTGTGCAATTTCTGACCCTTTTGTGGTGGTGTATAT CAACAGAGAAATCTCTAGCTTTTTCAGCGGCGAAGCGAATCCATGGCCGAGCACCTCGCT TCCATCTTTGGCACGGAGAAGGACCGCGTGAACTGCCCCTTCTACTTCAAGATCGGCGCG TGCCGCCATGGCGACCGATGCTCCCGCCTGCACAACAAGCCGTCGGTCTCGCCGACGCTG CTGCTCTCCAACATGTACCTGCGTCCGGACATGATCACCCCTGGAATTGATGCTCAGGGC AACCCCATCGACCCTGAGAAGATCCAGGCCGACTTCGAGGATTTCTACGAGGACATCTTT GAGGAACTCAGCAAGTACGGCGAGATCGAGAGCCTCCACGTGTGTGACAACTTCGCCGAC CACATGATCGGCAATGTGTATGTTCAATTCAGGGAGGAGGATCAGGCCGCCAGAGCGCTG CAGGCGCTGACGGGGCGGTACTACTCCGGCCGTCCTATCATTGTCGAGTTCTCGCCGGTG TCCGATTTCCGGGAGGCCACCTGCCGGCAATATGAAGAGAACAGCTGCAACCGTGGTGGG TACTGCAACTTCATGCACGTCAAGGAGATCGGCAGAGACCTGAGGAAGAGGTTGTTTGGG CACCTGCATAGGTCCCGGAGAAGCCATAGCCATGGCCGGAGCCGCAGCCCGAGCCCGTAC CATTACCGGAGGGACTATGATCGGAGGAGCTCATCGCGGTCCAGGGACCACGACGATTAC TACCGTGGAGGTAGCCACGATTACTACCGTGGAGGTAGCCGGAGGAGCAGCGAGAGGCAC CGCAGCAGCTACGACAGCGATGGCAGCAGGCGGCGGCACAGGTCCAGGACTAGGAGTCCT GTCAGGGATGGTAGCGAGGAGAGGAGAGCTCAAATTGAGCAGTGGAACCGTGAAAGGGAG GCTGCACAAGTGTGATCTCTGGATTAGTTGCTGTTTGCAATGGCCCATGTTTCTCATCTT GTACTGGTAGCCCTAGATTAAATTAGCATCATATCTTATCTTAATGATCTGAGCTTGGAT GTACTCGAGATTTTCCTTACTGAACTTGAATTTTCTGTCAGATGCATGTGTTAACTG