Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0487900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18814191:18817005:1 gene:Os09g0487900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 143 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0487900-01)
Sequence	ATGTACGGCGCGCCGGTGTCCAAGGACCTGAGCCTGCAGCCAGCCGGGGTGCGGACGCCG CCGCAGATGAGCTCGCCGGGCTTGCTGCGGTACAGGTCAGCGCCGAGCACGCTGCTCGGG GAGGTCTGCGGCGACTTCGTCCTCCCCGGTGGTGGTGGTGGTGGTGGGCAGCTGCAGCTG CAGCTGCAGCAGCAGCGGCCTGGGAGCCCGGACCACGCCGCGGACACCGTCCTCGCGCGC TTCCTCGCCGGCCATGGCGGCCACGACAACAAGCCTCCCCGCCCCGCCGCCCACTTCGCC CCACCGGAAGACTCCATGGCCTCGCATCAGCAGCAGCTCATGTACCAGTCGCATCAGCAG CAGCAGCAGATGGCTTCCGCCATGGAGGGACTCTACCGCACCGTCAGCTCCGGCGGCACG GAGTCCACCGCCGCCGCCGCCGGCAACAGCCTCCTCCGGCAGAGCAGCTCCCCCGCCGGC TTCCTCAACCATCTTACCATGGACAACGGATACGGGAATATGCTAAGAGCGGGCATGGGC GGCGGCGGCGGTGGCGGCGACCCGCGGCTCAAGGGGCAGCTCAGCTTCTCGTCGCGGCAG GGGTCGGTGATGTCCCAGATCTCGGAGATGGGCAGCGAGGACGAGGAGCTCGCCGGCGGC GGCGGCAGCCCGGAGGCTGGCAGCAACGGCGGTGGCGCCGCACGCGGCGGCTACGGCGGC GGGTACGCGATGGGGTCCTCCGCCTGGGAGGAGCCCTCGCCGCCGGCGACGTCGCTCCTC CCGGACAGCAGCCTCCCGTCCAAGCGCCCCCGCGACGACCTGCCGCGGCAGCTCAGCCTC CCGGCGGCGTCCAAGAACAGCAGCAAGCCCCCCTCCTCCGCCTCCGCCGCCGCGTCGCCG GAGATGGCCGCCATCGAGAAGTTCCTCCAGTTCCAGGACGCCGTCCCCTGCAAGATCCGC GCCAAGCGCGGCTGCGCCACCCACCCCCGCAGCATCGCCGAGCGGGTGAGGAGGACGCGG ATCAGCGAGCGGATACGGAAGCTGCAGGAGCTCGTCCCCAACATGGAAAAGCAAACCAAC ACTGCTGACATGTTGGATCTTGCCGTGGACTACATCAAGGAGCTCCAGAAGCAGGTCAAG GTGTTAAACGACAGCCGTTCCAGCTGCACCTGCTCGGCGAGCAAGCAGAAGCACTTCGCC GGCTAA

Peptide Sequence

PEP ID	Os09t0487900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18814191:18817005:1 gene:Os09g0487900 transcript:Os09t0487900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 143 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0487900-01)
Sequence	MYGAPVSKDLSLQPAGVRTPPQMSSPGLLRYRSAPSTLLGEVCGDFVLPGGGGGGGQLQL QLQQQRPGSPDHAADTVLARFLAGHGGHDNKPPRPAAHFAPPEDSMASHQQQLMYQSHQQ QQQMASAMEGLYRTVSSGGTESTAAAAGNSLLRQSSSPAGFLNHLTMDNGYGNMLRAGMG GGGGGGDPRLKGQLSFSSRQGSVMSQISEMGSEDEELAGGGGSPEAGSNGGGAARGGYGG GYAMGSSAWEEPSPPATSLLPDSSLPSKRPRDDLPRQLSLPAASKNSSKPPSSASAAASP EMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTN TADMLDLAVDYIKELQKQVKVLNDSRSSCTCSASKQKHFAG

Transcript Sequence

Transcript ID	Os09t0487900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18814191:18817005:1 gene:Os09g0487900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 143 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0487900-01)
Sequence	TCACCTCCTCCCTACCTCTCGCCATTATTAAATCCTCTCCTCTCCTCTCTTCTCCACATC CACAAGAAATTTCGTAGCGGAATCACGAGCCCTCGTCTCGATCGTAGCTTGAGCTTGAGC TGAGTTGCTGGTTTGGTGTGTGGAGAGATCAGTGGGGTGGGTGGGGGTGGGTGATGTACG GCGCGCCGGTGTCCAAGGACCTGAGCCTGCAGCCAGCCGGGGTGCGGACGCCGCCGCAGA TGAGCTCGCCGGGCTTGCTGCGGTACAGGTCAGCGCCGAGCACGCTGCTCGGGGAGGTCT GCGGCGACTTCGTCCTCCCCGGTGGTGGTGGTGGTGGTGGGCAGCTGCAGCTGCAGCTGC AGCAGCAGCGGCCTGGGAGCCCGGACCACGCCGCGGACACCGTCCTCGCGCGCTTCCTCG CCGGCCATGGCGGCCACGACAACAAGCCTCCCCGCCCCGCCGCCCACTTCGCCCCACCGG AAGACTCCATGGCCTCGCATCAGCAGCAGCTCATGTACCAGTCGCATCAGCAGCAGCAGC AGATGGCTTCCGCCATGGAGGGACTCTACCGCACCGTCAGCTCCGGCGGCACGGAGTCCA CCGCCGCCGCCGCCGGCAACAGCCTCCTCCGGCAGAGCAGCTCCCCCGCCGGCTTCCTCA ACCATCTTACCATGGACAACGGATACGGGAATATGCTAAGAGCGGGCATGGGCGGCGGCG GCGGTGGCGGCGACCCGCGGCTCAAGGGGCAGCTCAGCTTCTCGTCGCGGCAGGGGTCGG TGATGTCCCAGATCTCGGAGATGGGCAGCGAGGACGAGGAGCTCGCCGGCGGCGGCGGCA GCCCGGAGGCTGGCAGCAACGGCGGTGGCGCCGCACGCGGCGGCTACGGCGGCGGGTACG CGATGGGGTCCTCCGCCTGGGAGGAGCCCTCGCCGCCGGCGACGTCGCTCCTCCCGGACA GCAGCCTCCCGTCCAAGCGCCCCCGCGACGACCTGCCGCGGCAGCTCAGCCTCCCGGCGG CGTCCAAGAACAGCAGCAAGCCCCCCTCCTCCGCCTCCGCCGCCGCGTCGCCGGAGATGG CCGCCATCGAGAAGTTCCTCCAGTTCCAGGACGCCGTCCCCTGCAAGATCCGCGCCAAGC GCGGCTGCGCCACCCACCCCCGCAGCATCGCCGAGCGGGTGAGGAGGACGCGGATCAGCG AGCGGATACGGAAGCTGCAGGAGCTCGTCCCCAACATGGAAAAGCAAACCAACACTGCTG ACATGTTGGATCTTGCCGTGGACTACATCAAGGAGCTCCAGAAGCAGGTCAAGGTGTTAA ACGACAGCCGTTCCAGCTGCACCTGCTCGGCGAGCAAGCAGAAGCACTTCGCCGGCTAAA TCAATCAAGTCAATCAATCGCCATGACCGGTGCAGCAGTGCGCAACACACGAACGGCCGC AAAAGGCATGCAGCAGAAGCATCTGCACCGGCAGTTTTTCTAAGCTTCGTTTCCTTCTTT GCTGATGAATTCGCTGGTCTATCTGGTAAATTGAACATGAGGGCATTGGATTTTGGAGCA GTGGCATGCATTCTTCAGAGTTCACAAAGATGATGGGTTGGGGTCCCACATGGTAGTGGT AGACTACTGTAGCTGCAAAGCTTGATTAATTAATTAGCCTGTTCTTTTGATAATGAAGGA GAGGAGAGTAACTCACAAGTGTATAGATGGTTGTCTCATCTCTGTTTGTCATAGTACACA CCAAGTGCAAGTTGCAGCTGTGTCTGCTTGCAAGAATGCATGCCCATGTACATTGCATCC CCCTTTGCTTGACAAATGACACATCCAGACAGCCTCCATATCCTGTTTCCTCTCGTTGCT ACACCCTGTTTTTGTGAAGTACATGCATCGCAACAATGTTCACGAATAATCCTGGTC