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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0487500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18799382:18800056:-1 gene:Os09g0487500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0487500-01)
Sequence

ATGCGGGCGATCTCGTCGGCAGCGGGGGGGATGCTGCGGGCGCGGCTGCGCGGCGGGGCG
CGCGTCCGCGGCGGCGGCGGGCACGGGGAGGGGGGCGGGCGGTGGACGACCCCGGGGCAC
GAGGAGCAGCCCAAGGGCTACCTATTCAACCGGCCGCCGCCGCCGGCGGGGGAGTCGCGG
AAGTGGGAGGACTGGGAGTTGCCCTGCTACGTCACCTCGTTCCTCACCGTCGTCATCCTC
GGCGTCGGGCTCAACGCCAAGCCCGACCTCACCCTCGAGACCTGGGCGCACCAGAAGGCG
CTCGAGCGCCTCCAGCAGCAGGAGCTGGCCTCCGGGGAGGCCCAGGCCGAGTGA

Peptide Sequence

PEP ID

Os09t0487500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18799382:18800056:-1 gene:Os09g0487500 transcript:Os09t0487500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0487500-01)
Sequence

MRAISSAAGGMLRARLRGGARVRGGGGHGEGGGRWTTPGHEEQPKGYLFNRPPPPAGESR
KWEDWELPCYVTSFLTVVILGVGLNAKPDLTLETWAHQKALERLQQQELASGEAQAE

Transcript Sequence

Transcript ID

Os09t0487500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18799382:18800056:-1 gene:Os09g0487500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0487500-01)
Sequence

AACTCTTCCCCTTTCTCCCCCAAATCGGCGGCGACCTCTCTCCGATCTCCACCACCACCA
CCACCACGCGGGCGCGCGCACCAACCGGGGGGGCTTCGATGCGGGCGATCTCGTCGGCAG
CGGGGGGGATGCTGCGGGCGCGGCTGCGCGGCGGGGCGCGCGTCCGCGGCGGCGGCGGGC
ACGGGGAGGGGGGCGGGCGGTGGACGACCCCGGGGCACGAGGAGCAGCCCAAGGGCTACC
TATTCAACCGGCCGCCGCCGCCGGCGGGGGAGTCGCGGAAGTGGGAGGACTGGGAGTTGC
CCTGCTACGTCACCTCGTTCCTCACCGTCGTCATCCTCGGCGTCGGGCTCAACGCCAAGC
CCGACCTCACCCTCGAGACCTGGGCGCACCAGAAGGCGCTCGAGCGCCTCCAGCAGCAGG
AGCTGGCCTCCGGGGAGGCCCAGGCCGAGTGATCTGCGCGCCTCAGGTCACCTCGAACCC
TAGAATACTGCATCTGTTTTACTCCCAATAAGATGTTTGAGATGTGCGGGATGAACACTG
TGCTCTTGTTTCTGTTTTTGTTCTGTTTCCTCGTGGAATTTGTCCAATGATGGCGAATGC
CCTGAACATTTTGAAATGCTTTGTAATTCTATTATTTTCTCTTCCTTTAGTTGTGCTGCT
CTGAGAGTTTTCGTG