Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0484800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18707883:18710314:1 gene:Os09g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os09t0484800-01)
Sequence

ATGACGACGTCGATGGAGAAGCCCCGGCAGGTGGTGCGGAAGTTCCTGGCGCGGCCGCAG
CACGAGGGCGTCGGCGCCGTCGTTCGCCGGAGCATCGGGAGGTTTGAGCTGAGGTACTTC
GATCCGTTCCTCGTCCTGGACGAGTTCTCAGTGTCTGCTCCGGCTGGGTTCCCTGACCAT
CCACACAGAGGTTTCGAGACCGTCACTTACATGCTCGAGGGAGCCGTGACGCACGAGGAC
TTCGAGGGCCACCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGACGC
GGCATCGTGCACTCGGAGATGCCGGCGGGGCCCGGCACCTCCAGGGGCCTCCAGCTCTGG
GTCAACCTCTCCTCCCACAACAAGATGATCGAGCCGGGGTACCAGGAGATACAGAGCAAG
GACATCGCGAGCACGACGTCGGACGGCGTGACGGTGCGGGTGATCGCCGGGCAGTCGATG
GGCGCCCGGTCGCCGGTGCGCACGCGGACGCCGACCATGTACCTGGACTTCACGGTCCGC
CCCCACGCGGCGGCGCGGCAGCCGGTGTGCGCGACGTGGAACGCGTTCGCGTACGTGCTG
GAGGGGGAGGGCGTGTTCGGCGGCGGCGGCGGCGACAAGGCCGGGGCGCACCACCTGCTG
CTGCTCGGCCAGGGCGACGGCGTCGAGGTGTGGAACAGGTCGGACAAGCCGCTCCGGTTC
CTGCTCATCGCCGGCGAGCCCATCGGCGAGCCCGTGGCGCAGCTGGGGCCCTTCGTCATG
AACACCGAGGAGGAGATCGACATGACCATCAACGACTTCGAGTTCAGCATCAATGGCTTC
GAGAAGGCCAAGCACTGGAAGTCTCAGGCGCTGGTGGCGCTGGGCTTAGAGTAG

Peptide Sequence

PEP ID

Os09t0484800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18707883:18710314:1 gene:Os09g0484800 transcript:Os09t0484800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os09t0484800-01)
Sequence

MTTSMEKPRQVVRKFLARPQHEGVGAVVRRSIGRFELRYFDPFLVLDEFSVSAPAGFPDH
PHRGFETVTYMLEGAVTHEDFEGHRGTIKAGDVQWMTAGRGIVHSEMPAGPGTSRGLQLW
VNLSSHNKMIEPGYQEIQSKDIASTTSDGVTVRVIAGQSMGARSPVRTRTPTMYLDFTVR
PHAAARQPVCATWNAFAYVLEGEGVFGGGGGDKAGAHHLLLLGQGDGVEVWNRSDKPLRF
LLIAGEPIGEPVAQLGPFVMNTEEEIDMTINDFEFSINGFEKAKHWKSQALVALGLE

Transcript Sequence

Transcript ID

Os09t0484800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18707883:18710314:1 gene:Os09g0484800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pirin-like protein. (Os09t0484800-01)
Sequence

AAAAAACGCCAAGAAACCATCTGTCGCTTTTGACCCCGGGAAGCAGCAGCAGCAGCAGCG
GCGGCGGCGTATCGGGGCGTAACGGAATCGAGGTGTGTTGCCGCTATATAAAGAGGAAGA
AAATAGGCCCCAAACCAAACCACCATACCCTACTACAAACCATAGGCATCGCCGGCAAGG
GAGGTCGGAGGAAGAAGAAAGGGTCGTCGAGGTGTTCTTGAATTCTGAATTTCTGATCAA
GTCGATCGTTCGCCGGCGACGGCAAAGGTGGTAACTGGTAGTACTATATATGACGACGTC
GATGGAGAAGCCCCGGCAGGTGGTGCGGAAGTTCCTGGCGCGGCCGCAGCACGAGGGCGT
CGGCGCCGTCGTTCGCCGGAGCATCGGGAGGTTTGAGCTGAGGTACTTCGATCCGTTCCT
CGTCCTGGACGAGTTCTCAGTGTCTGCTCCGGCTGGGTTCCCTGACCATCCACACAGAGG
TTTCGAGACCGTCACTTACATGCTCGAGGGAGCCGTGACGCACGAGGACTTCGAGGGCCA
CCGTGGCACGATCAAGGCCGGCGACGTGCAGTGGATGACGGCCGGACGCGGCATCGTGCA
CTCGGAGATGCCGGCGGGGCCCGGCACCTCCAGGGGCCTCCAGCTCTGGGTCAACCTCTC
CTCCCACAACAAGATGATCGAGCCGGGGTACCAGGAGATACAGAGCAAGGACATCGCGAG
CACGACGTCGGACGGCGTGACGGTGCGGGTGATCGCCGGGCAGTCGATGGGCGCCCGGTC
GCCGGTGCGCACGCGGACGCCGACCATGTACCTGGACTTCACGGTCCGCCCCCACGCGGC
GGCGCGGCAGCCGGTGTGCGCGACGTGGAACGCGTTCGCGTACGTGCTGGAGGGGGAGGG
CGTGTTCGGCGGCGGCGGCGGCGACAAGGCCGGGGCGCACCACCTGCTGCTGCTCGGCCA
GGGCGACGGCGTCGAGGTGTGGAACAGGTCGGACAAGCCGCTCCGGTTCCTGCTCATCGC
CGGCGAGCCCATCGGCGAGCCCGTGGCGCAGCTGGGGCCCTTCGTCATGAACACCGAGGA
GGAGATCGACATGACCATCAACGACTTCGAGTTCAGCATCAATGGCTTCGAGAAGGCCAA
GCACTGGAAGTCTCAGGCGCTGGTGGCGCTGGGCTTAGAGTAGTAGGGTGCAACCATGGG
ACGACACGACATGTCGACATATGCTCTGAACGAAGGGAAAAAAAATGGAATAGTTCTTTC
TCTCATGATACGAGGTTGTTTTATTTATTTGTTTTTTTTCTCTTCCAAACAAATAGCGAT
CACTTTGTGTACATATCCGGCATAAGGTTGCTGCTTGCTTTTCAATTAGGCAGGTGCTTC
AAATCTTCGGCCCAATGACTAAAAATCATGTACTTACTCCACAAGTTCATAAACAAGTCC
TTTTGGACTTTCACTGTGTCTAATGCAAGATTTGTTTTTATAGAACTCT