Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0483600-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18673664:18674794:-1 gene:Os09g0483600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 714 description:Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein. (Os09t0483600-01)
Sequence

ATGGAGCGCGCAGTGCGGGAGCTGTGGGCGGAGTCGCGGGACCTGCTGGGCCTCCACTCC
CCGGACGACGCCGCCGCCGCCGACGCCGCGATGCCCCGCGCCGAGATGCCCCCGACGCCG
CTCGCGTTTCTCCGCGACCACGTCTCGCCGGGGCGCCCTCTCCTCGTGTCCTCCGCCGCC
ACCAGCCACTGGCCGGCCGCCTCGCTGTGGCCGACCGACTCCTACCTCACCGACGCGCTC
CGCTCCACCGCCGTCTCGCTCCACCTCACCCCCGACGGCCGCGCCGACGCCCTCGCCCCG
CACCCGCGCCCGAGCCACCCCGGCGCCAAGTGCTTCGCCTCCGCGCACGTCCGCCAGGTC
GACTTCCCCACCGCCGTGCGCCTCATCCGGAGCTCCGATCCGGCCTCCGGCCTGGTGGCC
TACGCGCAGCAGCAGGACGACTGCCTGCGCGGGGAGTACGCCGCCGTCGCCGGCGACGTG
GACGCGCACGTGCCCTGGGCCAGCGACGCGCTCGGCTGCCTCCCCGAGGCCGTCAACCTC
TGGATCGGCAGCGCCTGCTCCCAGACCTCCTTCCACAAGGACCACTACGACAACATCTAC
GTCGTCGTCTCCGGCGAGAAGCACTTCCTCCTCTTGCCCCCCACCGAGCACCACCGCCTC
TACGTCCGCGACTACCCCGCCGCCCACTACGCCGCGGAAGATGAAGCGGAGCTGAGGCTT
AAGCTGGAGCTGGAGGAGCCCGAGAGGATCGTGCCATGGAGCAGCGTTGACCCCTACCCG
CCGTCGCCGGAGGAGGCGGCCGCGCAGGCGTCATCCTTCCCGCTCTACTTCGAGGGGCCG
AGGCCGATCCGCTGCACGGTGCGCGCCGGCGAGATGCTCTACTTGCCGAGCATGTGGTTT
CACCATGTGAGCCAGAGCCCCGGGCCGAACGGGCTCACCATTGCAGTGAACTACTGGTAT
GACATGCAGTTTGACATTAAGTATGCCTACTTCAACTTCTTGAGGTCATTGGAGATCGAT
GGTAGTTCGTCGAAAAAGACGGATGCTTTGGAAGACGATCTCGAGGAGACGAATGATTGA

Peptide Sequence

PEP ID

Os09t0483600-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18673664:18674794:-1 gene:Os09g0483600 transcript:Os09t0483600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 714 description:Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein. (Os09t0483600-01)
Sequence

MERAVRELWAESRDLLGLHSPDDAAAADAAMPRAEMPPTPLAFLRDHVSPGRPLLVSSAA
TSHWPAASLWPTDSYLTDALRSTAVSLHLTPDGRADALAPHPRPSHPGAKCFASAHVRQV
DFPTAVRLIRSSDPASGLVAYAQQQDDCLRGEYAAVAGDVDAHVPWASDALGCLPEAVNL
WIGSACSQTSFHKDHYDNIYVVVSGEKHFLLLPPTEHHRLYVRDYPAAHYAAEDEAELRL
KLELEEPERIVPWSSVDPYPPSPEEAAAQASSFPLYFEGPRPIRCTVRAGEMLYLPSMWF
HHVSQSPGPNGLTIAVNYWYDMQFDIKYAYFNFLRSLEIDGSSSKKTDALEDDLEETND

Transcript Sequence

Transcript ID

Os09t0483600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18673664:18674794:-1 gene:Os09g0483600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Jumonji 714 description:Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein. (Os09t0483600-01)
Sequence

AATGGAGCGCGCAGTGCGGGAGCTGTGGGCGGAGTCGCGGGACCTGCTGGGCCTCCACTC
CCCGGACGACGCCGCCGCCGCCGACGCCGCGATGCCCCGCGCCGAGATGCCCCCGACGCC
GCTCGCGTTTCTCCGCGACCACGTCTCGCCGGGGCGCCCTCTCCTCGTGTCCTCCGCCGC
CACCAGCCACTGGCCGGCCGCCTCGCTGTGGCCGACCGACTCCTACCTCACCGACGCGCT
CCGCTCCACCGCCGTCTCGCTCCACCTCACCCCCGACGGCCGCGCCGACGCCCTCGCCCC
GCACCCGCGCCCGAGCCACCCCGGCGCCAAGTGCTTCGCCTCCGCGCACGTCCGCCAGGT
CGACTTCCCCACCGCCGTGCGCCTCATCCGGAGCTCCGATCCGGCCTCCGGCCTGGTGGC
CTACGCGCAGCAGCAGGACGACTGCCTGCGCGGGGAGTACGCCGCCGTCGCCGGCGACGT
GGACGCGCACGTGCCCTGGGCCAGCGACGCGCTCGGCTGCCTCCCCGAGGCCGTCAACCT
CTGGATCGGCAGCGCCTGCTCCCAGACCTCCTTCCACAAGGACCACTACGACAACATCTA
CGTCGTCGTCTCCGGCGAGAAGCACTTCCTCCTCTTGCCCCCCACCGAGCACCACCGCCT
CTACGTCCGCGACTACCCCGCCGCCCACTACGCCGCGGAAGATGAAGCGGAGCTGAGGCT
TAAGCTGGAGCTGGAGGAGCCCGAGAGGATCGTGCCATGGAGCAGCGTTGACCCCTACCC
GCCGTCGCCGGAGGAGGCGGCCGCGCAGGCGTCATCCTTCCCGCTCTACTTCGAGGGGCC
GAGGCCGATCCGCTGCACGGTGCGCGCCGGCGAGATGCTCTACTTGCCGAGCATGTGGTT
TCACCATGTGAGCCAGAGCCCCGGGCCGAACGGGCTCACCATTGCAGTGAACTACTGGTA
TGACATGCAGTTTGACATTAAGTATGCCTACTTCAACTTCTTGAGGTCATTGGAGATCGA
TGGTAGTTCGTCGAAAAAGACGGATGCTTTGGAAGACGATCTCGAGGAGACGAATGATTG
AATTGAAATTTTTGCGGTAATTCTGGATCTATGCAGAATATAACTTGATTC