Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0483500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18672334:18673103:1 gene:Os09g0483500 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os09t0483500-01)
Sequence	ATGAGTGTAGAAATCCTTGACGGCAAGACCATCAGGAGCTTCGTCGAGGACGAGGGCGCC TTCAACTCCTCCGTCGATGGCCGGTTCGCCGCCCTCGACACCAACCGTGACGGCCTCCTC TCCTACTCGGAGATGGCAAAGGAGCTCATGAGCCTCAGGGTCCTTGAGAAGCATTTCGGT GTTGATGAGGCCGCCATGAGCTCCGATGAACTCGTGGAGATGTACCGTGGCTTGTATGCG CGGTTCGACCACGACGGCAATGGCACGGTGGACTTGGAGGAGTTCCGGGCCGAGATGAAG GAGGTGATGCTCGCCGTCGCCAATGGGCTCGGGTTCCTGCCTGTTCAGATGGTGGTGGAG GAAGGCAGCTTCCTCAAGGTGGCTGTGGACAGGGAGCTGGCCAAGGCAGCCTGA

Peptide Sequence

PEP ID	Os09t0483500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18672334:18673103:1 gene:Os09g0483500 transcript:Os09t0483500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os09t0483500-01)
Sequence	MSVEILDGKTIRSFVEDEGAFNSSVDGRFAALDTNRDGLLSYSEMAKELMSLRVLEKHFG VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEFRAEMKEVMLAVANGLGFLPVQMVVE EGSFLKVAVDRELAKAA

Transcript Sequence

Transcript ID	Os09t0483500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18672334:18673103:1 gene:Os09g0483500 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os09t0483500-01)
Sequence	GCTCAAACCAAAGTACTAGAACAAAGACACAAACATCTCTGATACAACCACATTTTGTAG CACTCATCTGCTACACACCAAAAACATCTCTGAGACCGCCACATTTTGTAGAGCCGGCAA CATGAGTGTAGAAATCCTTGACGGCAAGACCATCAGGAGCTTCGTCGAGGACGAGGGCGC CTTCAACTCCTCCGTCGATGGCCGGTTCGCCGCCCTCGACACCAACCGTGACGGCCTCCT CTCCTACTCGGAGATGGCAAAGGAGCTCATGAGCCTCAGGGTCCTTGAGAAGCATTTCGG TGTTGATGAGGCCGCCATGAGCTCCGATGAACTCGTGGAGATGTACCGTGGCTTGTATGC GCGGTTCGACCACGACGGCAATGGCACGGTGGACTTGGAGGAGTTCCGGGCCGAGATGAA GGAGGTGATGCTCGCCGTCGCCAATGGGCTCGGGTTCCTGCCTGTTCAGATGGTGGTGGA GGAAGGCAGCTTCCTCAAGGTGGCTGTGGACAGGGAGCTGGCCAAGGCAGCCTGAAGCAC AACAGTTTTGCAGCAATATTTTTTTTTACATGTCTACTATTTATAATTTTGTCATTGCAT TCTTATTCTGGATTGAGCTATTTCATTTGCTAGTTATTATTGGCACACGGCAGAAACCAG GAGGTTGTAATACTGTACTTTACATATCACACAAGCTAGCTGAACAAATGGAAATGTTGT GCGGAATGCTCGTGAAATCCTACATTTGGGAATAAAACTAACAGTTCTGG