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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0482840-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18641600:18642303:1 gene:Os09g0482840 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482840-01)
Sequence

ATGAGTGTGGAGATCCTCGACGGCAAGACGGTCCTGAGCTTCGTGGAGGACGAGGGCGCC
TTCAACTCCTCCGTCGACGGCCGCTTCGCCGCGCTCGACACCAACCGCGACGGCCTCCTC
TCCTACGCCGAGATGGCCAACGAGCTCATGAGCCTCCGCGTGCTGGACAAGCACTTCGGC
GTCGACGAGGCCGCCATGGGCGCCGACGAGCTCGTGGAGCTGTACCACGGCTTGTTCTTG
CGGTTCGACCGCGATGGCAGTGGCGCCGTCGACCTGGAGGAGTTCCGGGCGGAGATGAAG
GAGGTGTTGCTCGCTGTCGCCAATGGCCTCGGGTTCCTGCCCGTGCAGATGGTGGTCGAG
GAAGGCAGCTTTCTCAAGGTTGCTGTCGACAGAGAGCTGGCCAAAGCGGCTTGA

Peptide Sequence

PEP ID

Os09t0482840-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18641600:18642303:1 gene:Os09g0482840 transcript:Os09t0482840-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482840-01)
Sequence

MSVEILDGKTVLSFVEDEGAFNSSVDGRFAALDTNRDGLLSYAEMANELMSLRVLDKHFG
VDEAAMGADELVELYHGLFLRFDRDGSGAVDLEEFRAEMKEVLLAVANGLGFLPVQMVVE
EGSFLKVAVDRELAKAA

Transcript Sequence

Transcript ID

Os09t0482840-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18641600:18642303:1 gene:Os09g0482840 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482840-01)
Sequence

AAACAAAACCAACCGAAAACAAACATTCCTCTGATAATTAAGTTATATTATACTTCCAAA
GAATCATCGCCATCATGAGTGTGGAGATCCTCGACGGCAAGACGGTCCTGAGCTTCGTGG
AGGACGAGGGCGCCTTCAACTCCTCCGTCGACGGCCGCTTCGCCGCGCTCGACACCAACC
GCGACGGCCTCCTCTCCTACGCCGAGATGGCCAACGAGCTCATGAGCCTCCGCGTGCTGG
ACAAGCACTTCGGCGTCGACGAGGCCGCCATGGGCGCCGACGAGCTCGTGGAGCTGTACC
ACGGCTTGTTCTTGCGGTTCGACCGCGATGGCAGTGGCGCCGTCGACCTGGAGGAGTTCC
GGGCGGAGATGAAGGAGGTGTTGCTCGCTGTCGCCAATGGCCTCGGGTTCCTGCCCGTGC
AGATGGTGGTCGAGGAAGGCAGCTTTCTCAAGGTTGCTGTCGACAGAGAGCTGGCCAAAG
CGGCTTGAAATATACCTCAACCGGCGAGCAAATTAATTTTCACATGTCCATTTACGATTT
TGGATTGCTTCTTATTGTTCTTACTTCTTGCATTTGTTGAGCTATACTATGTATCGTTTT
GATATTTCAGATGAAAACGGTACATCGATAGAACACTTGAAAAATCCTGTACCATTTTTA
TTTCTATTTCATTATTATAAATAATCGGAACACGACAACTGATT